RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 NARFQ9UHQ1 456 aa20.18■□□□□ 0.82
RARA-205ENST00000420042 COL15A1P39059 1388 aa20.18■□□□□ 0.82
RARA-205ENST00000420042 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
RARA-205ENST00000420042 TM4SF1P30408 202 aa20.17■□□□□ 0.82
RARA-205ENST00000420042 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
RARA-205ENST00000420042 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
RARA-205ENST00000420042 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
RARA-205ENST00000420042 BTBD11A6QL63 1104 aa20.16■□□□□ 0.82
RARA-205ENST00000420042 POLRMTO00411 1230 aaKnown RBP20.16■□□□□ 0.82
RARA-205ENST00000420042 FMNL2Q96PY5 1086 aa20.16■□□□□ 0.82
RARA-205ENST00000420042 GPBP1L1Q9HC44 474 aaPredicted RBP20.16■□□□□ 0.82
RARA-205ENST00000420042 CEMIPQ8WUJ3 1361 aa20.16■□□□□ 0.82
RARA-205ENST00000420042 HEG1Q9ULI3 1381 aa20.16■□□□□ 0.82
RARA-205ENST00000420042 GOLGB1Q14789 3259 aaKnown RBP20.15■□□□□ 0.82
RARA-205ENST00000420042 A0A087WZG4 1122 aa20.15■□□□□ 0.82
RARA-205ENST00000420042 PIM2Q9P1W9 311 aa20.15■□□□□ 0.82
RARA-205ENST00000420042 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
RARA-205ENST00000420042 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
RARA-205ENST00000420042 ADCY9O60503 1353 aa20.13■□□□□ 0.81
RARA-205ENST00000420042 SENP3-EIF4A1A0A087X0R7 540 aa20.13■□□□□ 0.81
RARA-205ENST00000420042 NEFMP07197 916 aa20.13■□□□□ 0.81
RARA-205ENST00000420042 KCNA3P22001 575 aa20.13■□□□□ 0.81
RARA-205ENST00000420042 NFIXQ14938 502 aa20.13■□□□□ 0.81
RARA-205ENST00000420042 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
RARA-205ENST00000420042 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
RARA-205ENST00000420042 ZNF330Q9Y3S2 320 aaPredicted RBP20.13■□□□□ 0.81
RARA-205ENST00000420042 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
RARA-205ENST00000420042 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
RARA-205ENST00000420042 MCM10Q7L590 875 aa20.12■□□□□ 0.81
RARA-205ENST00000420042 KIAA1551Q9HCM1 1747 aa20.12■□□□□ 0.81
RARA-205ENST00000420042 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
RARA-205ENST00000420042 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
RARA-205ENST00000420042 KCNQ3O43525 872 aa20.1■□□□□ 0.81
RARA-205ENST00000420042 HTATSF1O43719 755 aaKnown RBP20.1■□□□□ 0.81
RARA-205ENST00000420042 SERPINB2P05120 415 aa20.1■□□□□ 0.81
RARA-205ENST00000420042 CHRNA5P30532 468 aa20.1■□□□□ 0.81
RARA-205ENST00000420042 BICDL1Q6ZP65 573 aa20.1■□□□□ 0.81
RARA-205ENST00000420042 IL6STP40189 918 aaPredicted RBP20.09■□□□□ 0.81
RARA-205ENST00000420042 A1BGP04217 495 aa20.08■□□□□ 0.81
RARA-205ENST00000420042 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
RARA-205ENST00000420042 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.81
RARA-205ENST00000420042 SIPA1L3O60292 1781 aaPredicted RBP20.08■□□□□ 0.8
RARA-205ENST00000420042 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
RARA-205ENST00000420042 USP16Q9Y5T5 823 aa20.06■□□□□ 0.8
RARA-205ENST00000420042 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
RARA-205ENST00000420042 TBC1D9BQ66K14 1250 aa20.05■□□□□ 0.8
RARA-205ENST00000420042 PNNQ9H307 717 aaKnown RBP20.05■□□□□ 0.8
RARA-205ENST00000420042 DZIP3Q86Y13 1208 aaKnown RBP20.03■□□□□ 0.8
RARA-205ENST00000420042 PRAMEF22A3QJZ6 481 aa20.02■□□□□ 0.8
RARA-205ENST00000420042 H0YIN7 160 aa20.02■□□□□ 0.8
RARA-205ENST00000420042 RALBP1Q15311 655 aa20.02■□□□□ 0.8
RARA-205ENST00000420042 C9orf131Q5VYM1 1079 aa20.02■□□□□ 0.8
RARA-205ENST00000420042 C2CD5Q86YS7 1000 aa20.02■□□□□ 0.8
RARA-205ENST00000420042 SETDB2Q96T68 719 aa20.02■□□□□ 0.8
RARA-205ENST00000420042 BRCA1P38398 1863 aaKnown RBP20.02■□□□□ 0.8
RARA-205ENST00000420042 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.79
RARA-205ENST00000420042 CARMIL3Q8ND23 1372 aa20.01■□□□□ 0.79
RARA-205ENST00000420042 NPHP1O15259 732 aa20.01■□□□□ 0.79
RARA-205ENST00000420042 CAMTA2O94983 1202 aa20.01■□□□□ 0.79
RARA-205ENST00000420042 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
RARA-205ENST00000420042 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
RARA-205ENST00000420042 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
RARA-205ENST00000420042 TTLL6Q8N841 843 aa20■□□□□ 0.79
RARA-205ENST00000420042 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
RARA-205ENST00000420042 NRXN2Q9P2S2 1712 aa19.99■□□□□ 0.79
RARA-205ENST00000420042 PDE6BP35913 854 aa19.99■□□□□ 0.79
RARA-205ENST00000420042 NFE2L2Q16236 605 aa19.99■□□□□ 0.79
RARA-205ENST00000420042 BRIP1Q9BX63 1249 aa19.99■□□□□ 0.79
RARA-205ENST00000420042 RNF181Q9P0P0 153 aa19.99■□□□□ 0.79
RARA-205ENST00000420042 AFDNP55196 1824 aaKnown RBP19.99■□□□□ 0.79
RARA-205ENST00000420042 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
RARA-205ENST00000420042 KIF3CO14782 793 aa19.98■□□□□ 0.79
RARA-205ENST00000420042 DDX10Q13206 875 aaKnown RBP19.98■□□□□ 0.79
RARA-205ENST00000420042 PRR5LQ6MZQ0 368 aa19.98■□□□□ 0.79
RARA-205ENST00000420042 PDZRN3Q9UPQ7 1066 aa19.98■□□□□ 0.79
RARA-205ENST00000420042 ZNF652Q9Y2D9 606 aa19.98■□□□□ 0.79
RARA-205ENST00000420042 CCDC24Q8N4L8 307 aa19.97■□□□□ 0.79
RARA-205ENST00000420042 CNBD1Q8NA66 436 aa19.97■□□□□ 0.79
RARA-205ENST00000420042 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
RARA-205ENST00000420042 ST5P78524 1137 aa19.96■□□□□ 0.79
RARA-205ENST00000420042 CLEC4GQ6UXB4 293 aa19.96■□□□□ 0.79
RARA-205ENST00000420042 ZNF622Q969S3 477 aaKnown RBP eCLIP19.96■□□□□ 0.79
RARA-205ENST00000420042 NBPF26B4DH59 902 aa19.95■□□□□ 0.78
RARA-205ENST00000420042 NBPF10Q6P3W6 841 aaKnown RBP19.95■□□□□ 0.78
RARA-205ENST00000420042 NBPF15Q8N660 670 aa19.95■□□□□ 0.78
RARA-205ENST00000420042 THUMPD2Q9BTF0 503 aaKnown RBP19.94■□□□□ 0.78
RARA-205ENST00000420042 RASSF7Q02833 373 aa19.93■□□□□ 0.78
RARA-205ENST00000420042 NBPF5PQ86XG9 351 aaPredicted RBP19.93■□□□□ 0.78
RARA-205ENST00000420042 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
RARA-205ENST00000420042 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
RARA-205ENST00000420042 TOMM70O94826 608 aa19.92■□□□□ 0.78
RARA-205ENST00000420042 HSPA6P17066 643 aa19.92■□□□□ 0.78
RARA-205ENST00000420042 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
RARA-205ENST00000420042 MYBBP1AQ9BQG0 1328 aaKnown RBP19.92■□□□□ 0.78
RARA-205ENST00000420042 RGL2O15211 777 aa19.91■□□□□ 0.78
RARA-205ENST00000420042 LMNB1P20700 586 aa19.91■□□□□ 0.78
RARA-205ENST00000420042 RIPK4P57078 832 aa19.91■□□□□ 0.78
RARA-205ENST00000420042 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
RARA-205ENST00000420042 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
RARA-205ENST00000420042 NIP7Q9Y221 180 aaKnown RBP eCLIP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms