RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 DDR1Q08345 913 aa27.3■■□□□ 1.96
MCF2L-212ENST00000420013 HEG1Q9ULI3 1381 aa27.3■■□□□ 1.96
MCF2L-212ENST00000420013 PRKAR2BP31323 418 aa27.29■■□□□ 1.96
MCF2L-212ENST00000420013 NARFQ9UHQ1 456 aa27.29■■□□□ 1.96
MCF2L-212ENST00000420013 A0A0G2JLW4 131 aa27.28■■□□□ 1.96
MCF2L-212ENST00000420013 STARD3NLO95772 234 aa27.28■■□□□ 1.96
MCF2L-212ENST00000420013 PPP2R1AP30153 589 aa27.28■■□□□ 1.96
MCF2L-212ENST00000420013 ZNF790Q6PG37 636 aa27.28■■□□□ 1.96
MCF2L-212ENST00000420013 IL17REQ8NFR9 667 aa27.28■■□□□ 1.96
MCF2L-212ENST00000420013 BCS1LQ9Y276 419 aa27.28■■□□□ 1.96
MCF2L-212ENST00000420013 POLRMTO00411 1230 aaKnown RBP27.27■■□□□ 1.96
MCF2L-212ENST00000420013 DPEP1P16444 411 aa27.27■■□□□ 1.96
MCF2L-212ENST00000420013 USPL1Q5W0Q7 1092 aa27.27■■□□□ 1.96
MCF2L-212ENST00000420013 TEX13AQ9BXU3 409 aaPredicted RBP27.27■■□□□ 1.96
MCF2L-212ENST00000420013 GPBP1L1Q9HC44 474 aaPredicted RBP27.27■■□□□ 1.96
MCF2L-212ENST00000420013 TM4SF1P30408 202 aa27.26■■□□□ 1.95
MCF2L-212ENST00000420013 BCORQ6W2J9 1755 aa27.26■■□□□ 1.95
MCF2L-212ENST00000420013 SENP3-EIF4A1A0A087X0R7 540 aa27.25■■□□□ 1.95
MCF2L-212ENST00000420013 FCHSD2O94868 740 aa27.24■■□□□ 1.95
MCF2L-212ENST00000420013 ZNF496Q96IT1 587 aaPredicted RBP27.24■■□□□ 1.95
MCF2L-212ENST00000420013 FMNL2Q96PY5 1086 aa27.23■■□□□ 1.95
MCF2L-212ENST00000420013 A0A087WZG4 1122 aa27.22■■□□□ 1.95
MCF2L-212ENST00000420013 U2AF1L5P0DN76 240 aaPredicted RBP27.22■■□□□ 1.95
MCF2L-212ENST00000420013 U2AF1Q01081 240 aaKnown RBP eCLIP27.22■■□□□ 1.95
MCF2L-212ENST00000420013 PHACTR3Q96KR7 559 aa27.22■■□□□ 1.95
MCF2L-212ENST00000420013 PIM2Q9P1W9 311 aa27.22■■□□□ 1.95
MCF2L-212ENST00000420013 KCNA3P22001 575 aa27.21■■□□□ 1.95
MCF2L-212ENST00000420013 EIF5P55010 431 aaKnown RBP27.21■■□□□ 1.95
MCF2L-212ENST00000420013 LAMB4A4D0S4 1761 aa27.2■■□□□ 1.95
MCF2L-212ENST00000420013 DLG5Q8TDM6 1919 aa27.2■■□□□ 1.95
MCF2L-212ENST00000420013 NFIXQ14938 502 aa27.2■■□□□ 1.94
MCF2L-212ENST00000420013 CANXP27824 592 aaKnown RBP27.19■■□□□ 1.94
MCF2L-212ENST00000420013 RTF1Q92541 710 aaKnown RBP27.19■■□□□ 1.94
MCF2L-212ENST00000420013 BCL2L12Q9HB09 334 aa27.19■■□□□ 1.94
MCF2L-212ENST00000420013 DALRD3Q5D0E6 543 aaKnown RBP27.18■■□□□ 1.94
MCF2L-212ENST00000420013 BTBD11A6QL63 1104 aa27.17■■□□□ 1.94
MCF2L-212ENST00000420013 IL6STP40189 918 aaPredicted RBP27.17■■□□□ 1.94
MCF2L-212ENST00000420013 HTATSF1O43719 755 aaKnown RBP27.16■■□□□ 1.94
MCF2L-212ENST00000420013 ARHGAP27Q6ZUM4 889 aa27.16■■□□□ 1.94
MCF2L-212ENST00000420013 SBF1O95248 1867 aa27.16■■□□□ 1.94
MCF2L-212ENST00000420013 ANKRD31Q8N7Z5 1873 aa27.16■■□□□ 1.94
MCF2L-212ENST00000420013 ZNF526Q8TF50 670 aaPredicted RBP27.15■■□□□ 1.94
MCF2L-212ENST00000420013 SERPINB2P05120 415 aa27.14■■□□□ 1.94
MCF2L-212ENST00000420013 KDM3BQ7LBC6 1761 aa27.14■■□□□ 1.93
MCF2L-212ENST00000420013 CARMIL3Q8ND23 1372 aa27.13■■□□□ 1.93
MCF2L-212ENST00000420013 NPM2Q86SE8 214 aaKnown RBP27.13■■□□□ 1.93
MCF2L-212ENST00000420013 NEFMP07197 916 aa27.12■■□□□ 1.93
MCF2L-212ENST00000420013 CHRNA5P30532 468 aa27.12■■□□□ 1.93
MCF2L-212ENST00000420013 COL11A2P13942 1736 aaPredicted RBP27.12■■□□□ 1.93
MCF2L-212ENST00000420013 TNRC6CQ9HCJ0 1690 aaKnown RBP27.11■■□□□ 1.93
MCF2L-212ENST00000420013 MCM10Q7L590 875 aa27.09■■□□□ 1.93
MCF2L-212ENST00000420013 PDZRN3Q9UPQ7 1066 aa27.09■■□□□ 1.93
MCF2L-212ENST00000420013 ARFGEF2Q9Y6D5 1785 aa27.09■■□□□ 1.93
MCF2L-212ENST00000420013 KIF3CO14782 793 aa27.08■■□□□ 1.93
MCF2L-212ENST00000420013 ZNF330Q9Y3S2 320 aaPredicted RBP27.08■■□□□ 1.93
MCF2L-212ENST00000420013 KCNQ3O43525 872 aa27.07■■□□□ 1.92
MCF2L-212ENST00000420013 SNRPA1P09661 255 aaKnown RBP27.07■■□□□ 1.92
MCF2L-212ENST00000420013 TIAM2Q8IVF5 1701 aa27.07■■□□□ 1.92
MCF2L-212ENST00000420013 A1BGP04217 495 aa27.06■■□□□ 1.92
MCF2L-212ENST00000420013 C9orf131Q5VYM1 1079 aa27.06■■□□□ 1.92
MCF2L-212ENST00000420013 TBC1D9BQ66K14 1250 aa27.06■■□□□ 1.92
MCF2L-212ENST00000420013 ZC3H4Q9UPT8 1303 aaKnown RBP27.06■■□□□ 1.92
MCF2L-212ENST00000420013 CEP350Q5VT06 3117 aa27.06■■□□□ 1.92
MCF2L-212ENST00000420013 CAMTA2O94983 1202 aa27.05■■□□□ 1.92
MCF2L-212ENST00000420013 RGL2O15211 777 aa27.04■■□□□ 1.92
MCF2L-212ENST00000420013 BICDL1Q6ZP65 573 aa27.04■■□□□ 1.92
MCF2L-212ENST00000420013 DZIP3Q86Y13 1208 aaKnown RBP27.04■■□□□ 1.92
MCF2L-212ENST00000420013 PNNQ9H307 717 aaKnown RBP27.04■■□□□ 1.92
MCF2L-212ENST00000420013 TBC1D2BQ9UPU7 963 aa27.04■■□□□ 1.92
MCF2L-212ENST00000420013 H0YIN7 160 aa27.03■■□□□ 1.92
MCF2L-212ENST00000420013 C2CD5Q86YS7 1000 aa27.03■■□□□ 1.92
MCF2L-212ENST00000420013 TTLL6Q8N841 843 aa27.03■■□□□ 1.92
MCF2L-212ENST00000420013 USP16Q9Y5T5 823 aa27.03■■□□□ 1.92
MCF2L-212ENST00000420013 CACNA1SQ13698 1873 aa27.02■■□□□ 1.92
MCF2L-212ENST00000420013 HSPA6P17066 643 aa27.02■■□□□ 1.92
MCF2L-212ENST00000420013 DCTN1Q14203 1278 aa27.02■■□□□ 1.92
MCF2L-212ENST00000420013 TAF7Q15545 349 aaPredicted RBP27.02■■□□□ 1.92
MCF2L-212ENST00000420013 RNF181Q9P0P0 153 aa27.02■■□□□ 1.92
MCF2L-212ENST00000420013 CCDC88AQ3V6T2 1871 aa27.02■■□□□ 1.92
MCF2L-212ENST00000420013 PDE6BP35913 854 aa27.01■■□□□ 1.91
MCF2L-212ENST00000420013 PRR5LQ6MZQ0 368 aa27.01■■□□□ 1.91
MCF2L-212ENST00000420013 PNISRQ8TF01 805 aaKnown RBP27.01■■□□□ 1.91
MCF2L-212ENST00000420013 BRIP1Q9BX63 1249 aa27.01■■□□□ 1.91
MCF2L-212ENST00000420013 ZNF652Q9Y2D9 606 aa27.01■■□□□ 1.91
MCF2L-212ENST00000420013 FER1L6Q2WGJ9 1857 aa27.01■■□□□ 1.91
MCF2L-212ENST00000420013 CLEC4GQ6UXB4 293 aa27■■□□□ 1.91
MCF2L-212ENST00000420013 CNBD1Q8NA66 436 aa27■■□□□ 1.91
MCF2L-212ENST00000420013 PLEKHF1Q96S99 279 aa27■■□□□ 1.91
MCF2L-212ENST00000420013 SETDB2Q96T68 719 aa27■■□□□ 1.91
MCF2L-212ENST00000420013 DICER1Q9UPY3 1922 aaKnown RBP27■■□□□ 1.91
MCF2L-212ENST00000420013 KDM2BQ8NHM5 1336 aa26.99■■□□□ 1.91
MCF2L-212ENST00000420013 MAPK8IP3Q9UPT6 1336 aa26.99■■□□□ 1.91
MCF2L-212ENST00000420013 NFE2L2Q16236 605 aa26.99■■□□□ 1.91
MCF2L-212ENST00000420013 RALBP1Q15311 655 aa26.98■■□□□ 1.91
MCF2L-212ENST00000420013 PRAMEF22A3QJZ6 481 aa26.97■■□□□ 1.91
MCF2L-212ENST00000420013 TOMM70O94826 608 aa26.97■■□□□ 1.91
MCF2L-212ENST00000420013 ST5P78524 1137 aa26.97■■□□□ 1.91
MCF2L-212ENST00000420013 NPHP1O15259 732 aa26.96■■□□□ 1.91
MCF2L-212ENST00000420013 LMNB1P20700 586 aa26.95■■□□□ 1.9
MCF2L-212ENST00000420013 RASSF7Q02833 373 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms