RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 MAPK8IP3Q9UPT6 1336 aa21.07■□□□□ 0.96
NOD1-204ENST00000419601 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
NOD1-204ENST00000419601 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
NOD1-204ENST00000419601 DLG5Q8TDM6 1919 aa21.07■□□□□ 0.96
NOD1-204ENST00000419601 GOLGB1Q14789 3259 aaKnown RBP21.06■□□□□ 0.96
NOD1-204ENST00000419601 ZPR1O75312 459 aa21.06■□□□□ 0.96
NOD1-204ENST00000419601 C1QTNF8P60827 252 aa21.06■□□□□ 0.96
NOD1-204ENST00000419601 NFE2L2Q16236 605 aa21.06■□□□□ 0.96
NOD1-204ENST00000419601 COL15A1P39059 1388 aa21.06■□□□□ 0.96
NOD1-204ENST00000419601 KCNQ3O43525 872 aa21.05■□□□□ 0.96
NOD1-204ENST00000419601 PARP3Q9Y6F1 533 aa21.05■□□□□ 0.96
NOD1-204ENST00000419601 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
NOD1-204ENST00000419601 TAF7Q15545 349 aaPredicted RBP21.04■□□□□ 0.96
NOD1-204ENST00000419601 PRKRIP1Q9H875 184 aaPredicted RBP21.04■□□□□ 0.96
NOD1-204ENST00000419601 FKBP8Q14318 412 aa21.03■□□□□ 0.96
NOD1-204ENST00000419601 NARFQ9UHQ1 456 aa21.03■□□□□ 0.96
NOD1-204ENST00000419601 KIF13BQ9NQT8 1826 aa21.03■□□□□ 0.96
NOD1-204ENST00000419601 GRIN3BO60391 1043 aa21.02■□□□□ 0.96
NOD1-204ENST00000419601 YBX3P16989 372 aaKnown RBP eCLIP21.02■□□□□ 0.96
NOD1-204ENST00000419601 USPL1Q5W0Q7 1092 aa21.02■□□□□ 0.96
NOD1-204ENST00000419601 C10orf71Q711Q0 1435 aa21.02■□□□□ 0.96
NOD1-204ENST00000419601 EIF5P55010 431 aaKnown RBP21.01■□□□□ 0.95
NOD1-204ENST00000419601 A0A087WZG4 1122 aa21■□□□□ 0.95
NOD1-204ENST00000419601 SNRPA1P09661 255 aaKnown RBP21■□□□□ 0.95
NOD1-204ENST00000419601 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
NOD1-204ENST00000419601 IL6STP40189 918 aaPredicted RBP20.99■□□□□ 0.95
NOD1-204ENST00000419601 TGFB2P61812 414 aa20.99■□□□□ 0.95
NOD1-204ENST00000419601 WDR43Q15061 677 aaKnown RBP eCLIP20.99■□□□□ 0.95
NOD1-204ENST00000419601 TM4SF1P30408 202 aa20.98■□□□□ 0.95
NOD1-204ENST00000419601 DDR1Q08345 913 aa20.98■□□□□ 0.95
NOD1-204ENST00000419601 PXDNLA1KZ92 1463 aa20.98■□□□□ 0.95
NOD1-204ENST00000419601 GIGYF1O75420 1035 aaPredicted RBP20.97■□□□□ 0.95
NOD1-204ENST00000419601 A1BGP04217 495 aa20.97■□□□□ 0.95
NOD1-204ENST00000419601 NPM2Q86SE8 214 aaKnown RBP20.97■□□□□ 0.95
NOD1-204ENST00000419601 MIS18AQ9NYP9 233 aa20.97■□□□□ 0.95
NOD1-204ENST00000419601 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
NOD1-204ENST00000419601 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
NOD1-204ENST00000419601 KIAA1551Q9HCM1 1747 aa20.97■□□□□ 0.95
NOD1-204ENST00000419601 KDM3BQ7LBC6 1761 aa20.96■□□□□ 0.95
NOD1-204ENST00000419601 POLRMTO00411 1230 aaKnown RBP20.96■□□□□ 0.95
NOD1-204ENST00000419601 RIPK4P57078 832 aa20.96■□□□□ 0.95
NOD1-204ENST00000419601 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
NOD1-204ENST00000419601 BCL2L12Q9HB09 334 aa20.96■□□□□ 0.95
NOD1-204ENST00000419601 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
NOD1-204ENST00000419601 TMPOP42166 694 aaKnown RBP20.95■□□□□ 0.94
NOD1-204ENST00000419601 LMOD3Q0VAK6 560 aa20.95■□□□□ 0.94
NOD1-204ENST00000419601 NFIXQ14938 502 aa20.95■□□□□ 0.94
NOD1-204ENST00000419601 N4BP2Q86UW6 1770 aaPredicted RBP20.95■□□□□ 0.94
NOD1-204ENST00000419601 SCN7AQ01118 1682 aa20.94■□□□□ 0.94
NOD1-204ENST00000419601 RUNDC1Q96C34 613 aa20.94■□□□□ 0.94
NOD1-204ENST00000419601 A0A0G2JLW4 131 aa20.93■□□□□ 0.94
NOD1-204ENST00000419601 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
NOD1-204ENST00000419601 CCDC146Q8IYE0 955 aa20.93■□□□□ 0.94
NOD1-204ENST00000419601 WWC3Q9ULE0 1092 aa20.93■□□□□ 0.94
NOD1-204ENST00000419601 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
NOD1-204ENST00000419601 TBC1D2BQ9UPU7 963 aa20.93■□□□□ 0.94
NOD1-204ENST00000419601 LAMB4A4D0S4 1761 aa20.92■□□□□ 0.94
NOD1-204ENST00000419601 DPEP1P16444 411 aa20.91■□□□□ 0.94
NOD1-204ENST00000419601 AFDNP55196 1824 aaKnown RBP20.91■□□□□ 0.94
NOD1-204ENST00000419601 EIF4A1P60842 406 aaKnown RBP20.91■□□□□ 0.94
NOD1-204ENST00000419601 NRXN2Q9P2S2 1712 aa20.91■□□□□ 0.94
NOD1-204ENST00000419601 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
NOD1-204ENST00000419601 RRP7AQ9Y3A4 280 aaKnown RBP20.9■□□□□ 0.94
NOD1-204ENST00000419601 CAMTA2O94983 1202 aa20.89■□□□□ 0.93
NOD1-204ENST00000419601 SERPINB2P05120 415 aa20.89■□□□□ 0.93
NOD1-204ENST00000419601 PIP4K2AP48426 406 aaPredicted RBP20.89■□□□□ 0.93
NOD1-204ENST00000419601 BICDL1Q6ZP65 573 aa20.89■□□□□ 0.93
NOD1-204ENST00000419601 BABAM1Q9NWV8 329 aa20.89■□□□□ 0.93
NOD1-204ENST00000419601 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
NOD1-204ENST00000419601 BCORQ6W2J9 1755 aa20.89■□□□□ 0.93
NOD1-204ENST00000419601 BRCA1P38398 1863 aaKnown RBP20.88■□□□□ 0.93
NOD1-204ENST00000419601 CEP350Q5VT06 3117 aa20.88■□□□□ 0.93
NOD1-204ENST00000419601 NEUROD2Q15784 382 aa20.88■□□□□ 0.93
NOD1-204ENST00000419601 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
NOD1-204ENST00000419601 BCS1LQ9Y276 419 aa20.88■□□□□ 0.93
NOD1-204ENST00000419601 NBPF26B4DH59 902 aa20.87■□□□□ 0.93
NOD1-204ENST00000419601 KCNA3P22001 575 aa20.87■□□□□ 0.93
NOD1-204ENST00000419601 NBPF10Q6P3W6 841 aaKnown RBP20.87■□□□□ 0.93
NOD1-204ENST00000419601 NBPF15Q8N660 670 aa20.87■□□□□ 0.93
NOD1-204ENST00000419601 CARMIL3Q8ND23 1372 aa20.86■□□□□ 0.93
NOD1-204ENST00000419601 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
NOD1-204ENST00000419601 RGL2O15211 777 aa20.84■□□□□ 0.93
NOD1-204ENST00000419601 CHRNA5P30532 468 aa20.84■□□□□ 0.93
NOD1-204ENST00000419601 CLEC4GQ6UXB4 293 aa20.84■□□□□ 0.93
NOD1-204ENST00000419601 SETDB2Q96T68 719 aa20.84■□□□□ 0.93
NOD1-204ENST00000419601 TRIM35Q9UPQ4 493 aa20.84■□□□□ 0.93
NOD1-204ENST00000419601 ZNF652Q9Y2D9 606 aa20.84■□□□□ 0.93
NOD1-204ENST00000419601 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.92
NOD1-204ENST00000419601 DALRD3Q5D0E6 543 aaKnown RBP20.82■□□□□ 0.92
NOD1-204ENST00000419601 ATP10DQ9P241 1426 aa20.81■□□□□ 0.92
NOD1-204ENST00000419601 IFFO2Q5TF58 517 aa20.81■□□□□ 0.92
NOD1-204ENST00000419601 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
NOD1-204ENST00000419601 CHL1O00533 1208 aa20.8■□□□□ 0.92
NOD1-204ENST00000419601 ANP32CO43423 234 aa20.8■□□□□ 0.92
NOD1-204ENST00000419601 PRR5LQ6MZQ0 368 aa20.8■□□□□ 0.92
NOD1-204ENST00000419601 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
NOD1-204ENST00000419601 H0YIN7 160 aa20.79■□□□□ 0.92
NOD1-204ENST00000419601 NPHP1O15259 732 aa20.79■□□□□ 0.92
NOD1-204ENST00000419601 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
NOD1-204ENST00000419601 CNBD1Q8NA66 436 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms