RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SLC8A1P32418 973 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 IFT74Q96LB3 600 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 CEP104O60308 925 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
SATB1-204ENST00000417717 SSFA2P28290 1259 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
SATB1-204ENST00000417717 PKD2Q13563 968 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 LARP1BQ659C4 914 aaKnown RBP11.92□□□□□ -0.5
SATB1-204ENST00000417717 SECISBP2LQ93073 1101 aaKnown RBP11.92□□□□□ -0.5
SATB1-204ENST00000417717 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 MAATS1Q7Z4T9 603 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.92□□□□□ -0.5
SATB1-204ENST00000417717 DDX27Q96GQ7 796 aaKnown RBP11.92□□□□□ -0.5
SATB1-204ENST00000417717 TTC12Q9H892 705 aaPredicted RBP11.92□□□□□ -0.5
SATB1-204ENST00000417717 SKILP12757 684 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
SATB1-204ENST00000417717 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
SATB1-204ENST00000417717 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 STIM1Q13586 685 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 HSP90AB4PQ58FF6 505 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 MRFAP1L1Q96HT8 127 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 NDUFAB1O14561 156 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 ZFYVE27Q5T4F4 411 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 PIBF1Q8WXW3 757 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 PIK3R5Q8WYR1 880 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 TBC1D31Q96DN5 1066 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
SATB1-204ENST00000417717 SAMD9Q5K651 1589 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 ATP11AP98196 1134 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 NUP160Q12769 1436 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
SATB1-204ENST00000417717 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
SATB1-204ENST00000417717 AFAP1L1Q8TED9 768 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 FAM114A2Q9NRY5 505 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 SPA17Q15506 151 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 CCDC186Q7Z3E2 898 aa11.9□□□□□ -0.5
SATB1-204ENST00000417717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
SATB1-204ENST00000417717 ZNF165P49910 485 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 SATB1Q01826 763 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
SATB1-204ENST00000417717 CPLX4Q7Z7G2 160 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
SATB1-204ENST00000417717 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
SATB1-204ENST00000417717 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
SATB1-204ENST00000417717 SPATS2Q86XZ4 545 aaKnown RBP11.89□□□□□ -0.51
SATB1-204ENST00000417717 TRIM4Q9C037 500 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 RABGAP1Q9Y3P9 1069 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 MCTP2Q6DN12 878 aa11.89□□□□□ -0.51
SATB1-204ENST00000417717 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
SATB1-204ENST00000417717 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
SATB1-204ENST00000417717 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
SATB1-204ENST00000417717 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
SATB1-204ENST00000417717 TTC14Q96N46 770 aa11.88□□□□□ -0.51
SATB1-204ENST00000417717 GOPCQ9HD26 462 aa11.88□□□□□ -0.51
SATB1-204ENST00000417717 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
SATB1-204ENST00000417717 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
SATB1-204ENST00000417717 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
SATB1-204ENST00000417717 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
SATB1-204ENST00000417717 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
SATB1-204ENST00000417717 XBP1P17861 261 aa11.88□□□□□ -0.51
SATB1-204ENST00000417717 SOX12O15370 315 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 TRIM6Q9C030 488 aaPredicted RBP11.87□□□□□ -0.51
SATB1-204ENST00000417717 VCX3BQ9H321 246 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
SATB1-204ENST00000417717 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 PHACTR2O75167 634 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 EFCAB13Q8IY85 973 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 GBP5Q96PP8 586 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 RRP7AQ9Y3A4 280 aaKnown RBP11.87□□□□□ -0.51
SATB1-204ENST00000417717 KIAA0556O60303 1618 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 ZEB2O60315 1214 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
SATB1-204ENST00000417717 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 FAM200AQ8TCP9 573 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 ZSWIM4Q9H7M6 989 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 USH1CQ9Y6N9 552 aa11.87□□□□□ -0.51
SATB1-204ENST00000417717 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 LRRD1A4D1F6 860 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 GBP1P32455 592 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 SAMD15Q9P1V8 674 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 RAPGEF6Q8TEU7 1601 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms