RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
SEC22C-205ENST00000417572 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
SEC22C-205ENST00000417572 C5P01031 1676 aa16.7■□□□□ 0.26
SEC22C-205ENST00000417572 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
SEC22C-205ENST00000417572 PDIA6Q15084 440 aa16.7■□□□□ 0.26
SEC22C-205ENST00000417572 SSH1Q8WYL5 1049 aa16.7■□□□□ 0.26
SEC22C-205ENST00000417572 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
SEC22C-205ENST00000417572 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
SEC22C-205ENST00000417572 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
SEC22C-205ENST00000417572 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 BCL2L13Q9BXK5 485 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 RCAN3Q9UKA8 241 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 TJP1Q07157 1748 aa16.69■□□□□ 0.26
SEC22C-205ENST00000417572 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 ANXA1P04083 346 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
SEC22C-205ENST00000417572 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
SEC22C-205ENST00000417572 BCAR3O75815 825 aa16.67■□□□□ 0.26
SEC22C-205ENST00000417572 MYL6BP14649 208 aa16.67■□□□□ 0.26
SEC22C-205ENST00000417572 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
SEC22C-205ENST00000417572 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
SEC22C-205ENST00000417572 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
SEC22C-205ENST00000417572 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEC22C-205ENST00000417572 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
SEC22C-205ENST00000417572 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
SEC22C-205ENST00000417572 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
SEC22C-205ENST00000417572 ERBB4Q15303 1308 aa16.66■□□□□ 0.26
SEC22C-205ENST00000417572 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
SEC22C-205ENST00000417572 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
SEC22C-205ENST00000417572 HMGB2P26583 209 aaKnown RBP16.65■□□□□ 0.26
SEC22C-205ENST00000417572 G2E3Q7L622 706 aa16.65■□□□□ 0.26
SEC22C-205ENST00000417572 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
SEC22C-205ENST00000417572 PHAXQ9H814 394 aaKnown RBP16.65■□□□□ 0.26
SEC22C-205ENST00000417572 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
SEC22C-205ENST00000417572 LAMB4A4D0S4 1761 aa16.64■□□□□ 0.25
SEC22C-205ENST00000417572 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
SEC22C-205ENST00000417572 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
SEC22C-205ENST00000417572 AK7Q96M32 723 aa16.64■□□□□ 0.25
SEC22C-205ENST00000417572 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
SEC22C-205ENST00000417572 GNPATO15228 680 aa16.63■□□□□ 0.25
SEC22C-205ENST00000417572 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
SEC22C-205ENST00000417572 IL6STP40189 918 aaPredicted RBP16.63■□□□□ 0.25
SEC22C-205ENST00000417572 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
SEC22C-205ENST00000417572 SMIM5Q71RC9 77 aa16.63■□□□□ 0.25
SEC22C-205ENST00000417572 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
SEC22C-205ENST00000417572 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
SEC22C-205ENST00000417572 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
SEC22C-205ENST00000417572 AIMP1Q12904 312 aaKnown RBP16.62■□□□□ 0.25
SEC22C-205ENST00000417572 ZNF827Q17R98 1081 aa16.61■□□□□ 0.25
SEC22C-205ENST00000417572 COPS6Q7L5N1 327 aa16.61■□□□□ 0.25
SEC22C-205ENST00000417572 AMIGO3Q86WK7 504 aa16.61■□□□□ 0.25
SEC22C-205ENST00000417572 XAGE3Q8WTP9 111 aa16.61■□□□□ 0.25
SEC22C-205ENST00000417572 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
SEC22C-205ENST00000417572 RTCBQ9Y3I0 505 aaKnown RBP16.61■□□□□ 0.25
SEC22C-205ENST00000417572 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
SEC22C-205ENST00000417572 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
SEC22C-205ENST00000417572 FLIIQ13045 1269 aa16.6■□□□□ 0.25
SEC22C-205ENST00000417572 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
SEC22C-205ENST00000417572 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
SEC22C-205ENST00000417572 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
SEC22C-205ENST00000417572 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
SEC22C-205ENST00000417572 ARXQ96QS3 562 aa16.6■□□□□ 0.25
SEC22C-205ENST00000417572 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
SEC22C-205ENST00000417572 TFCP2L1Q9NZI6 479 aa16.6■□□□□ 0.25
SEC22C-205ENST00000417572 PHF14O94880 888 aa16.59■□□□□ 0.25
SEC22C-205ENST00000417572 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
SEC22C-205ENST00000417572 STK32BQ9NY57 414 aa16.59■□□□□ 0.25
SEC22C-205ENST00000417572 RREB1Q92766 1687 aa16.58■□□□□ 0.25
SEC22C-205ENST00000417572 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
SEC22C-205ENST00000417572 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
SEC22C-205ENST00000417572 ARHGEF1Q92888 912 aaKnown RBP16.58■□□□□ 0.24
SEC22C-205ENST00000417572 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
SEC22C-205ENST00000417572 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
SEC22C-205ENST00000417572 KIF16BQ96L93 1317 aa16.57■□□□□ 0.24
SEC22C-205ENST00000417572 A0A087WZG4 1122 aa16.57■□□□□ 0.24
SEC22C-205ENST00000417572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
SEC22C-205ENST00000417572 PLIN1O60240 522 aa16.57■□□□□ 0.24
SEC22C-205ENST00000417572 SSFA2P28290 1259 aa16.57■□□□□ 0.24
SEC22C-205ENST00000417572 DZIP3Q86Y13 1208 aaKnown RBP16.57■□□□□ 0.24
SEC22C-205ENST00000417572 COL15A1P39059 1388 aa16.57■□□□□ 0.24
SEC22C-205ENST00000417572 PTPRCP08575 1304 aa16.57■□□□□ 0.24
SEC22C-205ENST00000417572 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
SEC22C-205ENST00000417572 ANKRD13DQ6ZTN6 518 aa16.56■□□□□ 0.24
SEC22C-205ENST00000417572 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
SEC22C-205ENST00000417572 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
SEC22C-205ENST00000417572 PI4KAP2A4QPH2 592 aa16.55■□□□□ 0.24
SEC22C-205ENST00000417572 DDX58O95786 925 aaKnown RBP16.55■□□□□ 0.24
SEC22C-205ENST00000417572 ADRA2BP18089 450 aa16.55■□□□□ 0.24
SEC22C-205ENST00000417572 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
SEC22C-205ENST00000417572 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
SEC22C-205ENST00000417572 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
SEC22C-205ENST00000417572 PI4KAP1Q8N8J0 262 aa16.55■□□□□ 0.24
SEC22C-205ENST00000417572 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms