RNA–Protein interactions for RNA: ENST00000417550.6

ZNF250-202, Transcript of zinc finger protein 250, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF250, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-202ENST00000417550 SSH3Q8TE77 659 aa13.83□□□□□ -0.2
ZNF250-202ENST00000417550 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
ZNF250-202ENST00000417550 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
ZNF250-202ENST00000417550 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 MRC1P22897 1456 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 POLA2Q14181 598 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 NLRP2Q9NX02 1062 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
ZNF250-202ENST00000417550 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
ZNF250-202ENST00000417550 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
ZNF250-202ENST00000417550 MX1P20591 662 aa13.81□□□□□ -0.2
ZNF250-202ENST00000417550 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
ZNF250-202ENST00000417550 RAPGEF4Q8WZA2 1011 aa13.81□□□□□ -0.2
ZNF250-202ENST00000417550 CHMP5Q9NZZ3 219 aa13.81□□□□□ -0.2
ZNF250-202ENST00000417550 GLI3P10071 1580 aa13.8□□□□□ -0.2
ZNF250-202ENST00000417550 PHKG2P15735 406 aa13.8□□□□□ -0.2
ZNF250-202ENST00000417550 CPDO75976 1380 aa13.8□□□□□ -0.2
ZNF250-202ENST00000417550 SLC39A6Q13433 755 aa13.79□□□□□ -0.2
ZNF250-202ENST00000417550 PDIA6Q15084 440 aa13.79□□□□□ -0.2
ZNF250-202ENST00000417550 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
ZNF250-202ENST00000417550 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
ZNF250-202ENST00000417550 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
ZNF250-202ENST00000417550 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 IL1RAPL2Q9NP60 686 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 K7ELQ4 463 aaPredicted RBP13.78□□□□□ -0.2
ZNF250-202ENST00000417550 TATP17735 454 aaPredicted RBP13.78□□□□□ -0.2
ZNF250-202ENST00000417550 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
ZNF250-202ENST00000417550 CYP27B1O15528 508 aa13.77□□□□□ -0.21
ZNF250-202ENST00000417550 SRGAP3O43295 1099 aa13.77□□□□□ -0.21
ZNF250-202ENST00000417550 HSP90AB1P08238 724 aaKnown RBP13.77□□□□□ -0.21
ZNF250-202ENST00000417550 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
ZNF250-202ENST00000417550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.218e-6■■■□□ 14.7
ZNF250-202ENST00000417550 ERC2O15083 957 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 KSR2Q6VAB6 950 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 UNC5CLQ8IV45 518 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 AOX1Q06278 1338 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 EIF5BO60841 1220 aaKnown RBP13.76□□□□□ -0.21
ZNF250-202ENST00000417550 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
ZNF250-202ENST00000417550 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 RABEP1Q15276 862 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
ZNF250-202ENST00000417550 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
ZNF250-202ENST00000417550 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
ZNF250-202ENST00000417550 MCM4P33991 863 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 MTX1Q13505 466 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 HYPKQ9NX55 129 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 RAB11FIP3O75154 756 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 RHPN1Q8TCX5 695 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 ESYT1Q9BSJ8 1104 aa13.75□□□□□ -0.21
ZNF250-202ENST00000417550 REC8O95072 547 aa13.74□□□□□ -0.21
ZNF250-202ENST00000417550 PI4K2BQ8TCG2 481 aa13.74□□□□□ -0.21
ZNF250-202ENST00000417550 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
ZNF250-202ENST00000417550 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
ZNF250-202ENST00000417550 SHANK3Q9BYB0 1731 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 CHMLP26374 656 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
ZNF250-202ENST00000417550 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
ZNF250-202ENST00000417550 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 IL25Q9H293 177 aa13.73□□□□□ -0.21
ZNF250-202ENST00000417550 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
ZNF250-202ENST00000417550 UTYO14607 1347 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 ZNF335Q9H4Z2 1342 aaPredicted RBP13.72□□□□□ -0.21
ZNF250-202ENST00000417550 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
ZNF250-202ENST00000417550 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
ZNF250-202ENST00000417550 TRIM6-TRIM34B2RNG4 842 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 AIMP1Q12904 312 aaKnown RBP13.72□□□□□ -0.21
ZNF250-202ENST00000417550 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
ZNF250-202ENST00000417550 RILPL2Q969X0 211 aa13.72□□□□□ -0.21
ZNF250-202ENST00000417550 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
ZNF250-202ENST00000417550 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
ZNF250-202ENST00000417550 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.21
ZNF250-202ENST00000417550 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
ZNF250-202ENST00000417550 GRM8O00222 908 aa13.7□□□□□ -0.22
ZNF250-202ENST00000417550 MYL6BP14649 208 aa13.7□□□□□ -0.22
ZNF250-202ENST00000417550 PALD1Q9ULE6 856 aa13.7□□□□□ -0.22
ZNF250-202ENST00000417550 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
ZNF250-202ENST00000417550 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
ZNF250-202ENST00000417550 USP42Q9H9J4 1324 aaKnown RBP13.7□□□□□ -0.22
ZNF250-202ENST00000417550 PAPPAQ13219 1627 aa13.7□□□□□ -0.22
ZNF250-202ENST00000417550 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
ZNF250-202ENST00000417550 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
ZNF250-202ENST00000417550 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms