RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 TGFB2P61812 414 aa8.7□□□□□ -1.02
VNN3-205ENST00000417437 HTRA3P83110 453 aa8.7□□□□□ -1.02
VNN3-205ENST00000417437 CCDC146Q8IYE0 955 aa8.7□□□□□ -1.02
VNN3-205ENST00000417437 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
VNN3-205ENST00000417437 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
VNN3-205ENST00000417437 TMOD3Q9NYL9 352 aa8.7□□□□□ -1.02
VNN3-205ENST00000417437 LOC102724428A0A0B4J2F2 783 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 SIK1P57059 783 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 FSTL1Q12841 308 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 C9orf131Q5VYM1 1079 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 NLGN1Q8N2Q7 840 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 RTCBQ9Y3I0 505 aaKnown RBP8.69□□□□□ -1.02
VNN3-205ENST00000417437 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
VNN3-205ENST00000417437 PRELPP51888 382 aa8.68□□□□□ -1.02
VNN3-205ENST00000417437 AAMPQ13685 434 aa8.68□□□□□ -1.02
VNN3-205ENST00000417437 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
VNN3-205ENST00000417437 PIGBQ92521 554 aa8.68□□□□□ -1.02
VNN3-205ENST00000417437 GGNBP2Q9H3C7 697 aa8.68□□□□□ -1.02
VNN3-205ENST00000417437 PLEKHG2Q9H7P9 1386 aa8.68□□□□□ -1.02
VNN3-205ENST00000417437 CYP27B1O15528 508 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 DPEP1P16444 411 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
VNN3-205ENST00000417437 RFC4P35249 363 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 HSP90AB2PQ58FF8 381 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 AMIGO3Q86WK7 504 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
VNN3-205ENST00000417437 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 RNF181Q9P0P0 153 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 PIM2Q9P1W9 311 aa8.67□□□□□ -1.02
VNN3-205ENST00000417437 TOGARAM1Q9Y4F4 1720 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
VNN3-205ENST00000417437 PXDNLA1KZ92 1463 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 RGS3P49796 1198 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 C8orf34Q49A92 452 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 DALRD3Q5D0E6 543 aaKnown RBP8.66□□□□□ -1.02
VNN3-205ENST00000417437 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
VNN3-205ENST00000417437 MAPK8IP3Q9UPT6 1336 aa8.65□□□□□ -1.02
VNN3-205ENST00000417437 BCAR3O75815 825 aa8.65□□□□□ -1.02
VNN3-205ENST00000417437 SKAP1Q86WV1 359 aa8.65□□□□□ -1.02
VNN3-205ENST00000417437 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
VNN3-205ENST00000417437 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
VNN3-205ENST00000417437 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
VNN3-205ENST00000417437 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 FLT4P35916 1363 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 ARFGEF1Q9Y6D6 1849 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 ITPK1Q13572 414 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 WWC1Q8IX03 1113 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 IFNL2Q8IZJ0 200 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 KIF20BQ96Q89 1820 aa8.64□□□□□ -1.03
VNN3-205ENST00000417437 TNRC6CQ9HCJ0 1690 aaKnown RBP8.63□□□□□ -1.03
VNN3-205ENST00000417437 FYB1O15117 783 aa8.63□□□□□ -1.03
VNN3-205ENST00000417437 HSPA1AP0DMV8 641 aaKnown RBP8.63□□□□□ -1.03
VNN3-205ENST00000417437 HSPA1BP0DMV9 641 aaKnown RBP8.63□□□□□ -1.03
VNN3-205ENST00000417437 GSE1Q14687 1217 aa8.63□□□□□ -1.03
VNN3-205ENST00000417437 ARHGEF1Q92888 912 aaKnown RBP8.63□□□□□ -1.03
VNN3-205ENST00000417437 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
VNN3-205ENST00000417437 MAP2P11137 1827 aaKnown RBP8.63□□□□□ -1.03
VNN3-205ENST00000417437 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
VNN3-205ENST00000417437 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
VNN3-205ENST00000417437 VIRMAQ69YN4 1812 aaKnown RBP8.62□□□□□ -1.03
VNN3-205ENST00000417437 IGHDP01880 384 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 SLC4A3P48751 1232 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 BECN1Q14457 450 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 NKX1-1Q15270 411 aaPredicted RBP8.62□□□□□ -1.03
VNN3-205ENST00000417437 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 FOXD4L1Q9NU39 408 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 C10orf71Q711Q0 1435 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 SBF1O95248 1867 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
VNN3-205ENST00000417437 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
VNN3-205ENST00000417437 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
VNN3-205ENST00000417437 GYS1P13807 737 aa8.61□□□□□ -1.03
VNN3-205ENST00000417437 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
VNN3-205ENST00000417437 RWDD1Q9H446 243 aaPredicted RBP8.61□□□□□ -1.03
VNN3-205ENST00000417437 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
VNN3-205ENST00000417437 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
VNN3-205ENST00000417437 PHKG2P15735 406 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 CHRNA5P30532 468 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 RARSP54136 660 aaKnown RBP8.6□□□□□ -1.03
VNN3-205ENST00000417437 CABP4P57796 275 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 RC3H1Q5TC82 1133 aaKnown RBP8.6□□□□□ -1.03
VNN3-205ENST00000417437 PANK1Q8TE04 598 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
VNN3-205ENST00000417437 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.6□□□□□ -1.03
VNN3-205ENST00000417437 COG6Q9Y2V7 657 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
VNN3-205ENST00000417437 PTCD1O75127 700 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms