RNA–Protein interactions for RNA: ENST00000416995.1

LINC02558-201, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5

Gene LINC02558, Length 178 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-201ENST00000416995 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
LINC02558-201ENST00000416995 CHRNA5P30532 468 aa20.54■□□□□ 0.88
LINC02558-201ENST00000416995 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
LINC02558-201ENST00000416995 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
LINC02558-201ENST00000416995 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
LINC02558-201ENST00000416995 COL15A1P39059 1388 aa20.54■□□□□ 0.88
LINC02558-201ENST00000416995 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
LINC02558-201ENST00000416995 NFIXQ14938 502 aa20.52■□□□□ 0.88
LINC02558-201ENST00000416995 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
LINC02558-201ENST00000416995 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
LINC02558-201ENST00000416995 C9orf131Q5VYM1 1079 aa20.51■□□□□ 0.87
LINC02558-201ENST00000416995 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
LINC02558-201ENST00000416995 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
LINC02558-201ENST00000416995 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
LINC02558-201ENST00000416995 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
LINC02558-201ENST00000416995 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
LINC02558-201ENST00000416995 NMRK2Q9NPI5 230 aa20.49■□□□□ 0.87
LINC02558-201ENST00000416995 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
LINC02558-201ENST00000416995 STARD3NLO95772 234 aa20.48■□□□□ 0.87
LINC02558-201ENST00000416995 TEFQ10587 303 aa20.48■□□□□ 0.87
LINC02558-201ENST00000416995 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
LINC02558-201ENST00000416995 SIPA1L3O60292 1781 aaPredicted RBP20.48■□□□□ 0.87
LINC02558-201ENST00000416995 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
LINC02558-201ENST00000416995 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
LINC02558-201ENST00000416995 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
LINC02558-201ENST00000416995 SERPINB2P05120 415 aa20.46■□□□□ 0.87
LINC02558-201ENST00000416995 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
LINC02558-201ENST00000416995 TOMM70O94826 608 aa20.45■□□□□ 0.86
LINC02558-201ENST00000416995 RNF181Q9P0P0 153 aa20.45■□□□□ 0.86
LINC02558-201ENST00000416995 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
LINC02558-201ENST00000416995 SBF1O95248 1867 aa20.44■□□□□ 0.86
LINC02558-201ENST00000416995 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
LINC02558-201ENST00000416995 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
LINC02558-201ENST00000416995 CARMIL3Q8ND23 1372 aa20.44■□□□□ 0.86
LINC02558-201ENST00000416995 A0A087WZG4 1122 aa20.43■□□□□ 0.86
LINC02558-201ENST00000416995 DLEC1Q9Y238 1755 aa20.43■□□□□ 0.86
LINC02558-201ENST00000416995 KCNQ3O43525 872 aa20.42■□□□□ 0.86
LINC02558-201ENST00000416995 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
LINC02558-201ENST00000416995 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
LINC02558-201ENST00000416995 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
LINC02558-201ENST00000416995 RASSF7Q02833 373 aa20.41■□□□□ 0.86
LINC02558-201ENST00000416995 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
LINC02558-201ENST00000416995 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
LINC02558-201ENST00000416995 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
LINC02558-201ENST00000416995 A1BGP04217 495 aa20.4■□□□□ 0.86
LINC02558-201ENST00000416995 APLP1P51693 650 aa20.4■□□□□ 0.86
LINC02558-201ENST00000416995 SCN7AQ01118 1682 aa20.4■□□□□ 0.86
LINC02558-201ENST00000416995 TTLL6Q8N841 843 aa20.4■□□□□ 0.86
LINC02558-201ENST00000416995 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
LINC02558-201ENST00000416995 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
LINC02558-201ENST00000416995 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
LINC02558-201ENST00000416995 BTBD11A6QL63 1104 aa20.39■□□□□ 0.85
LINC02558-201ENST00000416995 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
LINC02558-201ENST00000416995 PPP2R1AP30153 589 aa20.38■□□□□ 0.85
LINC02558-201ENST00000416995 PRELPP51888 382 aa20.38■□□□□ 0.85
LINC02558-201ENST00000416995 RBM46Q8TBY0 533 aaKnown RBP20.38■□□□□ 0.85
LINC02558-201ENST00000416995 NUDCQ9Y266 331 aa20.38■□□□□ 0.85
LINC02558-201ENST00000416995 ANKRD31Q8N7Z5 1873 aa20.38■□□□□ 0.85
LINC02558-201ENST00000416995 H0YIN7 160 aa20.37■□□□□ 0.85
LINC02558-201ENST00000416995 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
LINC02558-201ENST00000416995 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
LINC02558-201ENST00000416995 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
LINC02558-201ENST00000416995 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
LINC02558-201ENST00000416995 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
LINC02558-201ENST00000416995 RRAGCQ9HB90 399 aa20.36■□□□□ 0.85
LINC02558-201ENST00000416995 LMNB1P20700 586 aa20.35■□□□□ 0.85
LINC02558-201ENST00000416995 PRR5LQ6MZQ0 368 aa20.35■□□□□ 0.85
LINC02558-201ENST00000416995 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
LINC02558-201ENST00000416995 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
LINC02558-201ENST00000416995 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
LINC02558-201ENST00000416995 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
LINC02558-201ENST00000416995 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
LINC02558-201ENST00000416995 NFKBIEO00221 500 aa20.34■□□□□ 0.85
LINC02558-201ENST00000416995 MCM10Q7L590 875 aa20.34■□□□□ 0.85
LINC02558-201ENST00000416995 TNRC6CQ9HCJ0 1690 aaKnown RBP20.34■□□□□ 0.85
LINC02558-201ENST00000416995 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.85
LINC02558-201ENST00000416995 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
LINC02558-201ENST00000416995 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
LINC02558-201ENST00000416995 ZNF622Q969S3 477 aaKnown RBP eCLIP20.33■□□□□ 0.85
LINC02558-201ENST00000416995 BCORQ6W2J9 1755 aa20.32■□□□□ 0.84
LINC02558-201ENST00000416995 PDE6BP35913 854 aa20.32■□□□□ 0.84
LINC02558-201ENST00000416995 FSTL1Q12841 308 aa20.32■□□□□ 0.84
LINC02558-201ENST00000416995 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
LINC02558-201ENST00000416995 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
LINC02558-201ENST00000416995 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
LINC02558-201ENST00000416995 SETDB2Q96T68 719 aa20.32■□□□□ 0.84
LINC02558-201ENST00000416995 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
LINC02558-201ENST00000416995 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
LINC02558-201ENST00000416995 PDZRN3Q9UPQ7 1066 aa20.31■□□□□ 0.84
LINC02558-201ENST00000416995 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
LINC02558-201ENST00000416995 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
LINC02558-201ENST00000416995 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
LINC02558-201ENST00000416995 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
LINC02558-201ENST00000416995 GLTPD2A6NH11 291 aa20.29■□□□□ 0.84
LINC02558-201ENST00000416995 C21orf2O43822 256 aa20.29■□□□□ 0.84
LINC02558-201ENST00000416995 HTRA3P83110 453 aa20.29■□□□□ 0.84
LINC02558-201ENST00000416995 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
LINC02558-201ENST00000416995 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
LINC02558-201ENST00000416995 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
LINC02558-201ENST00000416995 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms