RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
SEC22C-204ENST00000416880 ZNF496Q96IT1 587 aaPredicted RBP18.24■□□□□ 0.51
SEC22C-204ENST00000416880 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
SEC22C-204ENST00000416880 ZBTB1Q9Y2K1 713 aa18.24■□□□□ 0.51
SEC22C-204ENST00000416880 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
SEC22C-204ENST00000416880 COL15A1P39059 1388 aa18.23■□□□□ 0.51
SEC22C-204ENST00000416880 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
SEC22C-204ENST00000416880 NEFMP07197 916 aa18.23■□□□□ 0.51
SEC22C-204ENST00000416880 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
SEC22C-204ENST00000416880 DPEP1P16444 411 aa18.22■□□□□ 0.51
SEC22C-204ENST00000416880 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
SEC22C-204ENST00000416880 C1QTNF8P60827 252 aa18.22■□□□□ 0.51
SEC22C-204ENST00000416880 DDR1Q08345 913 aa18.22■□□□□ 0.51
SEC22C-204ENST00000416880 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
SEC22C-204ENST00000416880 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
SEC22C-204ENST00000416880 CANXP27824 592 aaKnown RBP18.21■□□□□ 0.51
SEC22C-204ENST00000416880 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
SEC22C-204ENST00000416880 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
SEC22C-204ENST00000416880 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
SEC22C-204ENST00000416880 BCS1LQ9Y276 419 aa18.2■□□□□ 0.5
SEC22C-204ENST00000416880 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
SEC22C-204ENST00000416880 KCNA3P22001 575 aa18.19■□□□□ 0.5
SEC22C-204ENST00000416880 NFIXQ14938 502 aa18.19■□□□□ 0.5
SEC22C-204ENST00000416880 NPM2Q86SE8 214 aaKnown RBP18.19■□□□□ 0.5
SEC22C-204ENST00000416880 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
SEC22C-204ENST00000416880 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
SEC22C-204ENST00000416880 ADCY9O60503 1353 aa18.18■□□□□ 0.5
SEC22C-204ENST00000416880 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
SEC22C-204ENST00000416880 BCL2L12Q9HB09 334 aa18.18■□□□□ 0.5
SEC22C-204ENST00000416880 RALBP1Q15311 655 aa18.17■□□□□ 0.5
SEC22C-204ENST00000416880 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
SEC22C-204ENST00000416880 DALRD3Q5D0E6 543 aaKnown RBP18.17■□□□□ 0.5
SEC22C-204ENST00000416880 GPBP1L1Q9HC44 474 aaPredicted RBP18.17■□□□□ 0.5
SEC22C-204ENST00000416880 SERPINB2P05120 415 aa18.16■□□□□ 0.5
SEC22C-204ENST00000416880 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
SEC22C-204ENST00000416880 ARHGAP27Q6ZUM4 889 aa18.16■□□□□ 0.5
SEC22C-204ENST00000416880 MCM10Q7L590 875 aa18.16■□□□□ 0.5
SEC22C-204ENST00000416880 KCNQ3O43525 872 aa18.15■□□□□ 0.5
SEC22C-204ENST00000416880 BRCA1P38398 1863 aaKnown RBP18.15■□□□□ 0.5
SEC22C-204ENST00000416880 A1BGP04217 495 aa18.14■□□□□ 0.49
SEC22C-204ENST00000416880 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
SEC22C-204ENST00000416880 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
SEC22C-204ENST00000416880 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
SEC22C-204ENST00000416880 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
SEC22C-204ENST00000416880 ARFGEF1Q9Y6D6 1849 aa18.13■□□□□ 0.49
SEC22C-204ENST00000416880 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
SEC22C-204ENST00000416880 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
SEC22C-204ENST00000416880 RGL2O15211 777 aa18.11■□□□□ 0.49
SEC22C-204ENST00000416880 CHRNA5P30532 468 aa18.11■□□□□ 0.49
SEC22C-204ENST00000416880 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
SEC22C-204ENST00000416880 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
SEC22C-204ENST00000416880 CLEC4GQ6UXB4 293 aa18.11■□□□□ 0.49
SEC22C-204ENST00000416880 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
SEC22C-204ENST00000416880 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
SEC22C-204ENST00000416880 H0YIN7 160 aa18.1■□□□□ 0.49
SEC22C-204ENST00000416880 TBC1D9BQ66K14 1250 aa18.1■□□□□ 0.49
SEC22C-204ENST00000416880 SETDB2Q96T68 719 aa18.1■□□□□ 0.49
SEC22C-204ENST00000416880 CARMIL3Q8ND23 1372 aa18.09■□□□□ 0.49
SEC22C-204ENST00000416880 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
SEC22C-204ENST00000416880 CAMTA2O94983 1202 aa18.09■□□□□ 0.49
SEC22C-204ENST00000416880 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
SEC22C-204ENST00000416880 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
SEC22C-204ENST00000416880 BRIP1Q9BX63 1249 aa18.09■□□□□ 0.49
SEC22C-204ENST00000416880 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
SEC22C-204ENST00000416880 PDE6BP35913 854 aa18.08■□□□□ 0.48
SEC22C-204ENST00000416880 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
SEC22C-204ENST00000416880 TTLL6Q8N841 843 aa18.08■□□□□ 0.48
SEC22C-204ENST00000416880 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
SEC22C-204ENST00000416880 C2CD5Q86YS7 1000 aa18.07■□□□□ 0.48
SEC22C-204ENST00000416880 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
SEC22C-204ENST00000416880 C9orf131Q5VYM1 1079 aa18.06■□□□□ 0.48
SEC22C-204ENST00000416880 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
SEC22C-204ENST00000416880 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
SEC22C-204ENST00000416880 MYBBP1AQ9BQG0 1328 aaKnown RBP18.05■□□□□ 0.48
SEC22C-204ENST00000416880 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
SEC22C-204ENST00000416880 PRR5LQ6MZQ0 368 aa18.05■□□□□ 0.48
SEC22C-204ENST00000416880 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
SEC22C-204ENST00000416880 BABAM1Q9NWV8 329 aa18.04■□□□□ 0.48
SEC22C-204ENST00000416880 MIS18AQ9NYP9 233 aa18.04■□□□□ 0.48
SEC22C-204ENST00000416880 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 KIF3CO14782 793 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 NPHP1O15259 732 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
SEC22C-204ENST00000416880 ST5P78524 1137 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 LMOD3Q0VAK6 560 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
SEC22C-204ENST00000416880 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
SEC22C-204ENST00000416880 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
SEC22C-204ENST00000416880 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
SEC22C-204ENST00000416880 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
SEC22C-204ENST00000416880 RIPK4P57078 832 aa18.01■□□□□ 0.47
SEC22C-204ENST00000416880 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
SEC22C-204ENST00000416880 BCORQ6W2J9 1755 aa18.01■□□□□ 0.47
SEC22C-204ENST00000416880 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
SEC22C-204ENST00000416880 ERVV-1B6SEH8 477 aa18■□□□□ 0.47
SEC22C-204ENST00000416880 LMNB1P20700 586 aa18■□□□□ 0.47
SEC22C-204ENST00000416880 STYK1Q6J9G0 422 aa18■□□□□ 0.47
SEC22C-204ENST00000416880 NBPF5PQ86XG9 351 aaPredicted RBP18■□□□□ 0.47
SEC22C-204ENST00000416880 CNKSR1Q969H4 720 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms