RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 ZPR1O75312 459 aa29.1■■■□□ 2.25
APTR-202ENST00000416650 USPL1Q5W0Q7 1092 aa29.1■■■□□ 2.25
APTR-202ENST00000416650 TTC5Q8N0Z6 440 aa29.1■■■□□ 2.25
APTR-202ENST00000416650 POLRMTO00411 1230 aaKnown RBP29.09■■■□□ 2.25
APTR-202ENST00000416650 TEFQ10587 303 aa29.09■■■□□ 2.25
APTR-202ENST00000416650 IL17REQ8NFR9 667 aa29.08■■■□□ 2.25
APTR-202ENST00000416650 ZNF526Q8TF50 670 aaPredicted RBP29.08■■■□□ 2.25
APTR-202ENST00000416650 CEMIPQ8WUJ3 1361 aa29.08■■■□□ 2.25
APTR-202ENST00000416650 SBF1O95248 1867 aa29.08■■■□□ 2.25
APTR-202ENST00000416650 TM4SF1P30408 202 aa29.07■■■□□ 2.24
APTR-202ENST00000416650 PRKAR2BP31323 418 aa29.07■■■□□ 2.24
APTR-202ENST00000416650 RSPH6AQ9H0K4 717 aa29.07■■■□□ 2.24
APTR-202ENST00000416650 NARFQ9UHQ1 456 aa29.07■■■□□ 2.24
APTR-202ENST00000416650 DLG5Q8TDM6 1919 aa29.06■■■□□ 2.24
APTR-202ENST00000416650 BCORQ6W2J9 1755 aa29.06■■■□□ 2.24
APTR-202ENST00000416650 FCHSD2O94868 740 aa29.06■■■□□ 2.24
APTR-202ENST00000416650 KCNA3P22001 575 aa29.06■■■□□ 2.24
APTR-202ENST00000416650 HEG1Q9ULI3 1381 aa29.05■■■□□ 2.24
APTR-202ENST00000416650 CEP350Q5VT06 3117 aa29.05■■■□□ 2.24
APTR-202ENST00000416650 PPP2R1AP30153 589 aa29.04■■■□□ 2.24
APTR-202ENST00000416650 ZNF790Q6PG37 636 aa29.04■■■□□ 2.24
APTR-202ENST00000416650 ZNF496Q96IT1 587 aaPredicted RBP29.04■■■□□ 2.24
APTR-202ENST00000416650 ANKRD31Q8N7Z5 1873 aa29.04■■■□□ 2.24
APTR-202ENST00000416650 PHACTR3Q96KR7 559 aa29.03■■■□□ 2.24
APTR-202ENST00000416650 PIM2Q9P1W9 311 aa29.03■■■□□ 2.24
APTR-202ENST00000416650 NUDCQ9Y266 331 aa29.03■■■□□ 2.24
APTR-202ENST00000416650 STARD3NLO95772 234 aa29.02■■■□□ 2.24
APTR-202ENST00000416650 CANXP27824 592 aaKnown RBP29.02■■■□□ 2.24
APTR-202ENST00000416650 NFIXQ14938 502 aa29.01■■■□□ 2.23
APTR-202ENST00000416650 ARHGAP27Q6ZUM4 889 aa29.01■■■□□ 2.23
APTR-202ENST00000416650 BCL2L12Q9HB09 334 aa29.01■■■□□ 2.23
APTR-202ENST00000416650 EIF5P55010 431 aaKnown RBP28.99■■■□□ 2.23
APTR-202ENST00000416650 CCDC88AQ3V6T2 1871 aa28.98■■■□□ 2.23
APTR-202ENST00000416650 U2AF1L5P0DN76 240 aaPredicted RBP28.98■■■□□ 2.23
APTR-202ENST00000416650 CHRNA5P30532 468 aa28.98■■■□□ 2.23
APTR-202ENST00000416650 U2AF1Q01081 240 aaKnown RBP eCLIP28.98■■■□□ 2.23
APTR-202ENST00000416650 DALRD3Q5D0E6 543 aaKnown RBP28.98■■■□□ 2.23
APTR-202ENST00000416650 TEX13AQ9BXU3 409 aaPredicted RBP28.98■■■□□ 2.23
APTR-202ENST00000416650 COL11A2P13942 1736 aaPredicted RBP28.97■■■□□ 2.23
APTR-202ENST00000416650 FMNL2Q96PY5 1086 aa28.97■■■□□ 2.23
APTR-202ENST00000416650 LAMB4A4D0S4 1761 aa28.97■■■□□ 2.23
APTR-202ENST00000416650 CACNA1SQ13698 1873 aa28.95■■■□□ 2.23
APTR-202ENST00000416650 A0A087WZG4 1122 aa28.95■■■□□ 2.22
APTR-202ENST00000416650 BTBD11A6QL63 1104 aa28.94■■■□□ 2.22
APTR-202ENST00000416650 CARMIL3Q8ND23 1372 aa28.93■■■□□ 2.22
APTR-202ENST00000416650 KIF3CO14782 793 aa28.93■■■□□ 2.22
APTR-202ENST00000416650 SERPINB2P05120 415 aa28.93■■■□□ 2.22
APTR-202ENST00000416650 KDM3BQ7LBC6 1761 aa28.93■■■□□ 2.22
APTR-202ENST00000416650 TIAM2Q8IVF5 1701 aa28.92■■■□□ 2.22
APTR-202ENST00000416650 TNRC6CQ9HCJ0 1690 aaKnown RBP28.92■■■□□ 2.22
APTR-202ENST00000416650 KCNQ3O43525 872 aa28.91■■■□□ 2.22
APTR-202ENST00000416650 IL6STP40189 918 aaPredicted RBP28.91■■■□□ 2.22
APTR-202ENST00000416650 RTF1Q92541 710 aaKnown RBP28.91■■■□□ 2.22
APTR-202ENST00000416650 ZNF330Q9Y3S2 320 aaPredicted RBP28.91■■■□□ 2.22
APTR-202ENST00000416650 ARFGEF2Q9Y6D5 1785 aa28.9■■■□□ 2.22
APTR-202ENST00000416650 C9orf131Q5VYM1 1079 aa28.89■■■□□ 2.22
APTR-202ENST00000416650 BICDL1Q6ZP65 573 aa28.89■■■□□ 2.22
APTR-202ENST00000416650 MCM10Q7L590 875 aa28.89■■■□□ 2.22
APTR-202ENST00000416650 A1BGP04217 495 aa28.87■■■□□ 2.21
APTR-202ENST00000416650 TBC1D9BQ66K14 1250 aa28.87■■■□□ 2.21
APTR-202ENST00000416650 TBC1D2BQ9UPU7 963 aa28.87■■■□□ 2.21
APTR-202ENST00000416650 FER1L6Q2WGJ9 1857 aa28.85■■■□□ 2.21
APTR-202ENST00000416650 DICER1Q9UPY3 1922 aaKnown RBP28.85■■■□□ 2.21
APTR-202ENST00000416650 HSPA6P17066 643 aa28.85■■■□□ 2.21
APTR-202ENST00000416650 HTATSF1O43719 755 aaKnown RBP28.84■■■□□ 2.21
APTR-202ENST00000416650 DCTN1Q14203 1278 aa28.84■■■□□ 2.21
APTR-202ENST00000416650 NPM2Q86SE8 214 aaKnown RBP28.84■■■□□ 2.21
APTR-202ENST00000416650 RNF181Q9P0P0 153 aa28.84■■■□□ 2.21
APTR-202ENST00000416650 C2CD5Q86YS7 1000 aa28.83■■■□□ 2.21
APTR-202ENST00000416650 CAMTA2O94983 1202 aa28.82■■■□□ 2.2
APTR-202ENST00000416650 NMRK2Q9NPI5 230 aa28.82■■■□□ 2.2
APTR-202ENST00000416650 USP16Q9Y5T5 823 aa28.82■■■□□ 2.2
APTR-202ENST00000416650 PRAMEF22A3QJZ6 481 aa28.81■■■□□ 2.2
APTR-202ENST00000416650 H0YIN7 160 aa28.8■■■□□ 2.2
APTR-202ENST00000416650 SNRPA1P09661 255 aaKnown RBP28.8■■■□□ 2.2
APTR-202ENST00000416650 RASSF7Q02833 373 aa28.8■■■□□ 2.2
APTR-202ENST00000416650 PRR5LQ6MZQ0 368 aa28.8■■■□□ 2.2
APTR-202ENST00000416650 DZIP3Q86Y13 1208 aaKnown RBP28.8■■■□□ 2.2
APTR-202ENST00000416650 TTLL6Q8N841 843 aa28.8■■■□□ 2.2
APTR-202ENST00000416650 PIP4K2AP48426 406 aaPredicted RBP28.79■■■□□ 2.2
APTR-202ENST00000416650 SLX4Q8IY92 1834 aa28.78■■■□□ 2.2
APTR-202ENST00000416650 NEFMP07197 916 aa28.78■■■□□ 2.2
APTR-202ENST00000416650 NUP98P52948 1817 aa28.78■■■□□ 2.2
APTR-202ENST00000416650 TOMM70O94826 608 aa28.77■■■□□ 2.2
APTR-202ENST00000416650 BRIP1Q9BX63 1249 aa28.77■■■□□ 2.2
APTR-202ENST00000416650 PDZRN3Q9UPQ7 1066 aa28.77■■■□□ 2.2
APTR-202ENST00000416650 WDR90Q96KV7 1748 aa28.77■■■□□ 2.2
APTR-202ENST00000416650 KDM2BQ8NHM5 1336 aa28.76■■■□□ 2.19
APTR-202ENST00000416650 PDE6BP35913 854 aa28.76■■■□□ 2.19
APTR-202ENST00000416650 SETDB2Q96T68 719 aa28.76■■■□□ 2.19
APTR-202ENST00000416650 ZC3H4Q9UPT8 1303 aaKnown RBP28.75■■■□□ 2.19
APTR-202ENST00000416650 TAF7Q15545 349 aaPredicted RBP28.75■■■□□ 2.19
APTR-202ENST00000416650 CNBD1Q8NA66 436 aa28.75■■■□□ 2.19
APTR-202ENST00000416650 CCDC24Q8N4L8 307 aa28.74■■■□□ 2.19
APTR-202ENST00000416650 PLEKHF1Q96S99 279 aa28.74■■■□□ 2.19
APTR-202ENST00000416650 NPHP1O15259 732 aa28.72■■■□□ 2.19
APTR-202ENST00000416650 LMNB1P20700 586 aa28.72■■■□□ 2.19
APTR-202ENST00000416650 ZNF622Q969S3 477 aaKnown RBP eCLIP28.72■■■□□ 2.19
APTR-202ENST00000416650 NBPF26B4DH59 902 aa28.71■■■□□ 2.19
APTR-202ENST00000416650 PRELPP51888 382 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms