RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 USPL1Q5W0Q7 1092 aa15.28■□□□□ 0.04
SNX30-202ENST00000416585 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
SNX30-202ENST00000416585 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
SNX30-202ENST00000416585 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
SNX30-202ENST00000416585 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
SNX30-202ENST00000416585 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.04
SNX30-202ENST00000416585 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
SNX30-202ENST00000416585 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
SNX30-202ENST00000416585 NPC1L1Q9UHC9 1359 aa15.26■□□□□ 0.03
SNX30-202ENST00000416585 CYP19A1P11511 503 aaPredicted RBP15.26■□□□□ 0.03
SNX30-202ENST00000416585 DDR1Q08345 913 aa15.26■□□□□ 0.03
SNX30-202ENST00000416585 C16orf71Q8IYS4 520 aaPredicted RBP15.26■□□□□ 0.03
SNX30-202ENST00000416585 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
SNX30-202ENST00000416585 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
SNX30-202ENST00000416585 PER1O15534 1290 aaPredicted RBP15.25■□□□□ 0.03
SNX30-202ENST00000416585 STARD3NLO95772 234 aa15.25■□□□□ 0.03
SNX30-202ENST00000416585 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
SNX30-202ENST00000416585 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
SNX30-202ENST00000416585 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
SNX30-202ENST00000416585 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
SNX30-202ENST00000416585 DICER1Q9UPY3 1922 aaKnown RBP15.24■□□□□ 0.03
SNX30-202ENST00000416585 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
SNX30-202ENST00000416585 KIF3CO14782 793 aa15.24■□□□□ 0.03
SNX30-202ENST00000416585 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
SNX30-202ENST00000416585 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
SNX30-202ENST00000416585 ANKRD31Q8N7Z5 1873 aa15.24■□□□□ 0.03
SNX30-202ENST00000416585 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
SNX30-202ENST00000416585 A0A087WZG4 1122 aa15.23■□□□□ 0.03
SNX30-202ENST00000416585 TM4SF1P30408 202 aa15.23■□□□□ 0.03
SNX30-202ENST00000416585 CHRNA5P30532 468 aa15.23■□□□□ 0.03
SNX30-202ENST00000416585 C9orf131Q5VYM1 1079 aa15.23■□□□□ 0.03
SNX30-202ENST00000416585 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
SNX30-202ENST00000416585 ZNF330Q9Y3S2 320 aaPredicted RBP15.23■□□□□ 0.03
SNX30-202ENST00000416585 DLG5Q8TDM6 1919 aa15.23■□□□□ 0.03
SNX30-202ENST00000416585 TOMM70O94826 608 aa15.22■□□□□ 0.03
SNX30-202ENST00000416585 KCNA3P22001 575 aa15.22■□□□□ 0.03
SNX30-202ENST00000416585 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
SNX30-202ENST00000416585 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
SNX30-202ENST00000416585 NPHP1O15259 732 aa15.21■□□□□ 0.03
SNX30-202ENST00000416585 SERPINB2P05120 415 aa15.21■□□□□ 0.03
SNX30-202ENST00000416585 NFIXQ14938 502 aa15.21■□□□□ 0.03
SNX30-202ENST00000416585 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.02
SNX30-202ENST00000416585 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.02
SNX30-202ENST00000416585 APLP1P51693 650 aa15.2■□□□□ 0.02
SNX30-202ENST00000416585 BICDL1Q6ZP65 573 aa15.2■□□□□ 0.02
SNX30-202ENST00000416585 FMNL2Q96PY5 1086 aa15.2■□□□□ 0.02
SNX30-202ENST00000416585 COL11A2P13942 1736 aaPredicted RBP15.2■□□□□ 0.02
SNX30-202ENST00000416585 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
SNX30-202ENST00000416585 ZNF790Q6PG37 636 aa15.19■□□□□ 0.02
SNX30-202ENST00000416585 NMRK2Q9NPI5 230 aa15.19■□□□□ 0.02
SNX30-202ENST00000416585 FER1L6Q2WGJ9 1857 aa15.18■□□□□ 0.02
SNX30-202ENST00000416585 H0YIN7 160 aa15.18■□□□□ 0.02
SNX30-202ENST00000416585 PRKAR2BP31323 418 aa15.18■□□□□ 0.02
SNX30-202ENST00000416585 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
SNX30-202ENST00000416585 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
SNX30-202ENST00000416585 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
SNX30-202ENST00000416585 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
SNX30-202ENST00000416585 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
SNX30-202ENST00000416585 CARMIL3Q8ND23 1372 aa15.16■□□□□ 0.02
SNX30-202ENST00000416585 NEFMP07197 916 aa15.16■□□□□ 0.02
SNX30-202ENST00000416585 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
SNX30-202ENST00000416585 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
SNX30-202ENST00000416585 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
SNX30-202ENST00000416585 RBM46Q8TBY0 533 aaKnown RBP15.16■□□□□ 0.02
SNX30-202ENST00000416585 PDZRN3Q9UPQ7 1066 aa15.16■□□□□ 0.02
SNX30-202ENST00000416585 ZC3H4Q9UPT8 1303 aaKnown RBP15.16■□□□□ 0.02
SNX30-202ENST00000416585 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
SNX30-202ENST00000416585 PDE6BP35913 854 aa15.15■□□□□ 0.02
SNX30-202ENST00000416585 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNX30-202ENST00000416585 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
SNX30-202ENST00000416585 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
SNX30-202ENST00000416585 LMNB1P20700 586 aa15.14■□□□□ 0.01
SNX30-202ENST00000416585 RASSF7Q02833 373 aa15.14■□□□□ 0.01
SNX30-202ENST00000416585 ZNF622Q969S3 477 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX30-202ENST00000416585 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
SNX30-202ENST00000416585 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
SNX30-202ENST00000416585 ST5P78524 1137 aa15.13■□□□□ 0.01
SNX30-202ENST00000416585 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
SNX30-202ENST00000416585 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
SNX30-202ENST00000416585 RRAGCQ9HB90 399 aa15.13■□□□□ 0.01
SNX30-202ENST00000416585 NUP98P52948 1817 aa15.13■□□□□ 0.01
SNX30-202ENST00000416585 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
SNX30-202ENST00000416585 KDM3BQ7LBC6 1761 aa15.12■□□□□ 0.01
SNX30-202ENST00000416585 FSTL1Q12841 308 aa15.12■□□□□ 0.01
SNX30-202ENST00000416585 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
SNX30-202ENST00000416585 CNBD1Q8NA66 436 aa15.12■□□□□ 0.01
SNX30-202ENST00000416585 ZNF652Q9Y2D9 606 aa15.12■□□□□ 0.01
SNX30-202ENST00000416585 A1BGP04217 495 aa15.11■□□□□ 0.01
SNX30-202ENST00000416585 PPP2R1AP30153 589 aa15.11■□□□□ 0.01
SNX30-202ENST00000416585 PHACTR3Q96KR7 559 aa15.11■□□□□ 0.01
SNX30-202ENST00000416585 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
SNX30-202ENST00000416585 IFFO2Q5TF58 517 aa15.1■□□□□ 0.01
SNX30-202ENST00000416585 PRR5LQ6MZQ0 368 aa15.1■□□□□ 0.01
SNX30-202ENST00000416585 SMC1BQ8NDV3 1235 aa15.1■□□□□ 0.01
SNX30-202ENST00000416585 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
SNX30-202ENST00000416585 SNRPA1P09661 255 aaKnown RBP15.09■□□□□ 0.01
SNX30-202ENST00000416585 DPY19L2Q6NUT2 758 aa15.09■□□□□ 0.01
SNX30-202ENST00000416585 MCM10Q7L590 875 aa15.09■□□□□ 0.01
SNX30-202ENST00000416585 GLTPD2A6NH11 291 aa15.08■□□□□ 0
SNX30-202ENST00000416585 KCNQ3O43525 872 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms