RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
LINC00475-202ENST00000416438 CHPF2Q9P2E5 772 aa17.9■□□□□ 0.46
LINC00475-202ENST00000416438 MCM2P49736 904 aa17.89■□□□□ 0.45
LINC00475-202ENST00000416438 GDPD2Q9HCC8 539 aa17.89■□□□□ 0.45
LINC00475-202ENST00000416438 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
LINC00475-202ENST00000416438 ANAPC15P60006 121 aa17.89■□□□□ 0.45
LINC00475-202ENST00000416438 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
LINC00475-202ENST00000416438 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
LINC00475-202ENST00000416438 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
LINC00475-202ENST00000416438 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
LINC00475-202ENST00000416438 POLA2Q14181 598 aa17.87■□□□□ 0.45
LINC00475-202ENST00000416438 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
LINC00475-202ENST00000416438 ZSCAN30Q86W11 494 aa17.87■□□□□ 0.45
LINC00475-202ENST00000416438 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
LINC00475-202ENST00000416438 LRRC37A3O60309 1634 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 DTNBO60941 627 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 HSPA4P34932 840 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 RNF214Q8ND24 703 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
LINC00475-202ENST00000416438 BABAM1Q9NWV8 329 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 TPRNQ4KMQ1 711 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 BEND3Q5T5X7 828 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
LINC00475-202ENST00000416438 RAB11FIP3O75154 756 aa17.85■□□□□ 0.45
LINC00475-202ENST00000416438 DNAAF4Q8WXU2 420 aa17.85■□□□□ 0.45
LINC00475-202ENST00000416438 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
LINC00475-202ENST00000416438 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
LINC00475-202ENST00000416438 PHF8Q9UPP1 1060 aa17.84■□□□□ 0.45
LINC00475-202ENST00000416438 GADD45BO75293 160 aaPredicted RBP17.84■□□□□ 0.45
LINC00475-202ENST00000416438 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
LINC00475-202ENST00000416438 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
LINC00475-202ENST00000416438 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
LINC00475-202ENST00000416438 IP6K1Q92551 441 aa17.83■□□□□ 0.45
LINC00475-202ENST00000416438 KIF1BPQ96EK5 621 aa17.83■□□□□ 0.45
LINC00475-202ENST00000416438 SPG7Q9UQ90 795 aa17.83■□□□□ 0.45
LINC00475-202ENST00000416438 AOX1Q06278 1338 aa17.83■□□□□ 0.45
LINC00475-202ENST00000416438 SGSM2O43147 1006 aa17.83■□□□□ 0.44
LINC00475-202ENST00000416438 CPA1P15085 419 aa17.83■□□□□ 0.44
LINC00475-202ENST00000416438 MSNP26038 577 aaKnown RBP17.83■□□□□ 0.44
LINC00475-202ENST00000416438 TUBGCP6Q96RT7 1819 aa17.83■□□□□ 0.44
LINC00475-202ENST00000416438 CEMIPQ8WUJ3 1361 aa17.83■□□□□ 0.44
LINC00475-202ENST00000416438 SNX14Q9Y5W7 946 aa17.82■□□□□ 0.44
LINC00475-202ENST00000416438 BTBD11A6QL63 1104 aa17.82■□□□□ 0.44
LINC00475-202ENST00000416438 OS9Q13438 667 aaPredicted RBP17.81■□□□□ 0.44
LINC00475-202ENST00000416438 PDLIM2Q96JY6 352 aa17.81■□□□□ 0.44
LINC00475-202ENST00000416438 LSG1Q9H089 658 aaKnown RBP17.81■□□□□ 0.44
LINC00475-202ENST00000416438 PXDNLA1KZ92 1463 aa17.81■□□□□ 0.44
LINC00475-202ENST00000416438 MBD3O95983 291 aa17.81■□□□□ 0.44
LINC00475-202ENST00000416438 TEFQ10587 303 aa17.81■□□□□ 0.44
LINC00475-202ENST00000416438 IL17RAQ96F46 866 aa17.81■□□□□ 0.44
LINC00475-202ENST00000416438 SETD1BQ9UPS6 1966 aaKnown RBP17.81■□□□□ 0.44
LINC00475-202ENST00000416438 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
LINC00475-202ENST00000416438 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
LINC00475-202ENST00000416438 USP48Q86UV5 1035 aa17.8■□□□□ 0.44
LINC00475-202ENST00000416438 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
LINC00475-202ENST00000416438 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
LINC00475-202ENST00000416438 RAD50Q92878 1312 aa17.8■□□□□ 0.44
LINC00475-202ENST00000416438 AK2P54819 239 aa17.8■□□□□ 0.44
LINC00475-202ENST00000416438 PROSER3Q2NL68 480 aa17.8■□□□□ 0.44
LINC00475-202ENST00000416438 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
LINC00475-202ENST00000416438 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
LINC00475-202ENST00000416438 ADCY9O60503 1353 aa17.79■□□□□ 0.44
LINC00475-202ENST00000416438 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
LINC00475-202ENST00000416438 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
LINC00475-202ENST00000416438 PSME1Q06323 249 aa17.78■□□□□ 0.44
LINC00475-202ENST00000416438 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
LINC00475-202ENST00000416438 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
LINC00475-202ENST00000416438 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
LINC00475-202ENST00000416438 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
LINC00475-202ENST00000416438 TTC14Q96N46 770 aa17.78■□□□□ 0.44
LINC00475-202ENST00000416438 MAP3K2Q9Y2U5 619 aa17.78■□□□□ 0.44
LINC00475-202ENST00000416438 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.44
LINC00475-202ENST00000416438 LTN1O94822 1766 aa17.77■□□□□ 0.44
LINC00475-202ENST00000416438 PTH1RQ03431 593 aa17.77■□□□□ 0.44
LINC00475-202ENST00000416438 WDR33Q9C0J8 1336 aaKnown RBP17.77■□□□□ 0.44
LINC00475-202ENST00000416438 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.44
LINC00475-202ENST00000416438 LARGE1O95461 756 aa17.76■□□□□ 0.43
LINC00475-202ENST00000416438 NOL7Q9UMY1 257 aaKnown RBP17.76■□□□□ 0.43
LINC00475-202ENST00000416438 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
LINC00475-202ENST00000416438 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
LINC00475-202ENST00000416438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
LINC00475-202ENST00000416438 CASTP20810 708 aaKnown RBP17.75■□□□□ 0.43
LINC00475-202ENST00000416438 ADCK5Q3MIX3 580 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 CLASRPQ8N2M8 674 aaKnown RBP17.75■□□□□ 0.43
LINC00475-202ENST00000416438 TSPY26PQ9H489 355 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 USP54Q70EL1 1684 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 OFD1O75665 1012 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 HOXB7P09629 217 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
LINC00475-202ENST00000416438 CACNA1FO60840 1977 aa17.75■□□□□ 0.43
LINC00475-202ENST00000416438 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
LINC00475-202ENST00000416438 EPB41L2O43491 1005 aaKnown RBP17.74■□□□□ 0.43
LINC00475-202ENST00000416438 GLRX3O76003 335 aaKnown RBP17.74■□□□□ 0.43
LINC00475-202ENST00000416438 PLEKHO1Q53GL0 409 aaPredicted RBP17.74■□□□□ 0.43
LINC00475-202ENST00000416438 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
LINC00475-202ENST00000416438 LMOD2Q6P5Q4 547 aa17.74■□□□□ 0.43
LINC00475-202ENST00000416438 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
LINC00475-202ENST00000416438 SYT1P21579 422 aa17.74■□□□□ 0.43
LINC00475-202ENST00000416438 HS1BP3Q53T59 392 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms