RNA–Protein interactions for RNA: ENST00000416279.1

LINC01946-201, Transcript of long intergenic non-protein coding RNA 1946, humanhuman

TSL 5 BASIC

Gene LINC01946, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01946-201ENST00000416279 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
LINC01946-201ENST00000416279 GPR162Q16538 588 aa12.93□□□□□ -0.34
LINC01946-201ENST00000416279 TRAPPC3LQ5T215 181 aa12.93□□□□□ -0.34
LINC01946-201ENST00000416279 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
LINC01946-201ENST00000416279 KCNQ3O43525 872 aa12.91□□□□□ -0.34
LINC01946-201ENST00000416279 DDR1Q08345 913 aa12.91□□□□□ -0.34
LINC01946-201ENST00000416279 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
LINC01946-201ENST00000416279 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
LINC01946-201ENST00000416279 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
LINC01946-201ENST00000416279 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
LINC01946-201ENST00000416279 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
LINC01946-201ENST00000416279 KCNA3P22001 575 aa12.9□□□□□ -0.34
LINC01946-201ENST00000416279 TM4SF1P30408 202 aa12.9□□□□□ -0.34
LINC01946-201ENST00000416279 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
LINC01946-201ENST00000416279 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
LINC01946-201ENST00000416279 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
LINC01946-201ENST00000416279 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
LINC01946-201ENST00000416279 ANP32CO43423 234 aa12.89□□□□□ -0.35
LINC01946-201ENST00000416279 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
LINC01946-201ENST00000416279 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
LINC01946-201ENST00000416279 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
LINC01946-201ENST00000416279 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
LINC01946-201ENST00000416279 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
LINC01946-201ENST00000416279 RFC4P35249 363 aa12.88□□□□□ -0.35
LINC01946-201ENST00000416279 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
LINC01946-201ENST00000416279 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
LINC01946-201ENST00000416279 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
LINC01946-201ENST00000416279 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
LINC01946-201ENST00000416279 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
LINC01946-201ENST00000416279 FCHSD2O94868 740 aa12.87□□□□□ -0.35
LINC01946-201ENST00000416279 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
LINC01946-201ENST00000416279 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01946-201ENST00000416279 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
LINC01946-201ENST00000416279 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
LINC01946-201ENST00000416279 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
LINC01946-201ENST00000416279 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
LINC01946-201ENST00000416279 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
LINC01946-201ENST00000416279 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
LINC01946-201ENST00000416279 MCM10Q7L590 875 aa12.86□□□□□ -0.35
LINC01946-201ENST00000416279 NRXN2Q9P2S2 1712 aa12.85□□□□□ -0.35
LINC01946-201ENST00000416279 ADCY9O60503 1353 aa12.85□□□□□ -0.35
LINC01946-201ENST00000416279 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
LINC01946-201ENST00000416279 DPEP1P16444 411 aa12.85□□□□□ -0.35
LINC01946-201ENST00000416279 COL15A1P39059 1388 aa12.84□□□□□ -0.35
LINC01946-201ENST00000416279 TGFB2P61812 414 aa12.84□□□□□ -0.35
LINC01946-201ENST00000416279 NARFQ9UHQ1 456 aa12.84□□□□□ -0.35
LINC01946-201ENST00000416279 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
LINC01946-201ENST00000416279 A1BGP04217 495 aa12.83□□□□□ -0.36
LINC01946-201ENST00000416279 TEFQ10587 303 aa12.83□□□□□ -0.36
LINC01946-201ENST00000416279 NFIXQ14938 502 aa12.83□□□□□ -0.36
LINC01946-201ENST00000416279 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
LINC01946-201ENST00000416279 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
LINC01946-201ENST00000416279 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
LINC01946-201ENST00000416279 BTBD11A6QL63 1104 aa12.81□□□□□ -0.36
LINC01946-201ENST00000416279 MIS18AQ9NYP9 233 aa12.81□□□□□ -0.36
LINC01946-201ENST00000416279 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
LINC01946-201ENST00000416279 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
LINC01946-201ENST00000416279 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
LINC01946-201ENST00000416279 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
LINC01946-201ENST00000416279 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
LINC01946-201ENST00000416279 CHRNA5P30532 468 aa12.8□□□□□ -0.36
LINC01946-201ENST00000416279 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
LINC01946-201ENST00000416279 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
LINC01946-201ENST00000416279 TTC5Q8N0Z6 440 aa12.8□□□□□ -0.36
LINC01946-201ENST00000416279 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
LINC01946-201ENST00000416279 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
LINC01946-201ENST00000416279 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 ZPR1O75312 459 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 STARD3NLO95772 234 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
LINC01946-201ENST00000416279 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
LINC01946-201ENST00000416279 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
LINC01946-201ENST00000416279 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
LINC01946-201ENST00000416279 SERPINB2P05120 415 aa12.78□□□□□ -0.36
LINC01946-201ENST00000416279 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
LINC01946-201ENST00000416279 MIER1Q8N108 512 aa12.78□□□□□ -0.36
LINC01946-201ENST00000416279 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
LINC01946-201ENST00000416279 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
LINC01946-201ENST00000416279 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
LINC01946-201ENST00000416279 BCORQ6W2J9 1755 aa12.77□□□□□ -0.36
LINC01946-201ENST00000416279 CCER2I3L3R5 266 aa12.77□□□□□ -0.37
LINC01946-201ENST00000416279 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
LINC01946-201ENST00000416279 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
LINC01946-201ENST00000416279 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
LINC01946-201ENST00000416279 DLEC1Q9Y238 1755 aa12.76□□□□□ -0.37
LINC01946-201ENST00000416279 SBF1O95248 1867 aa12.76□□□□□ -0.37
LINC01946-201ENST00000416279 PRELPP51888 382 aa12.76□□□□□ -0.37
LINC01946-201ENST00000416279 C1QTNF8P60827 252 aa12.76□□□□□ -0.37
LINC01946-201ENST00000416279 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
LINC01946-201ENST00000416279 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms