RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ZNF213O14771 459 aa12.46□□□□□ -0.42
COL12A1-203ENST00000416123 DBF4Q9UBU7 674 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-203ENST00000416123 UBE3BQ7Z3V4 1068 aa12.45□□□□□ -0.42
COL12A1-203ENST00000416123 FLIIQ13045 1269 aa12.45□□□□□ -0.42
COL12A1-203ENST00000416123 ACBD3Q9H3P7 528 aa12.45□□□□□ -0.42
COL12A1-203ENST00000416123 ALDH1L2Q3SY69 923 aa12.45□□□□□ -0.42
COL12A1-203ENST00000416123 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
COL12A1-203ENST00000416123 BMP2KQ9NSY1 1161 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-203ENST00000416123 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
COL12A1-203ENST00000416123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL12A1-203ENST00000416123 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-203ENST00000416123 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 RDXP35241 583 aaKnown RBP12.44□□□□□ -0.42
COL12A1-203ENST00000416123 ZNF287Q9HBT7 754 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 MSH6P52701 1360 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 TNRQ92752 1358 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 TRIM27P14373 513 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 MYO6Q9UM54 1294 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 KLHL10Q6JEL2 608 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 WASF1Q92558 559 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 CDR1P51861 262 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 HAND2P61296 217 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-203ENST00000416123 UBA5Q9GZZ9 404 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 MBIPQ9NS73 344 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 SSR1P43307 286 aaKnown RBP12.44□□□□□ -0.42
COL12A1-203ENST00000416123 PI4KAP1Q8N8J0 262 aa12.44□□□□□ -0.42
COL12A1-203ENST00000416123 NEFHP12036 1026 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 LDHAL6AQ6ZMR3 332 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 CCDC181Q5TID7 509 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 ASXL2Q76L83 1435 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
COL12A1-203ENST00000416123 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
COL12A1-203ENST00000416123 DDX46Q7L014 1031 aaKnown RBP12.42□□□□□ -0.42
COL12A1-203ENST00000416123 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
COL12A1-203ENST00000416123 SYCE3A1L190 88 aa12.42□□□□□ -0.42
COL12A1-203ENST00000416123 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
COL12A1-203ENST00000416123 LIG1P18858 919 aa12.42□□□□□ -0.42
COL12A1-203ENST00000416123 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
COL12A1-203ENST00000416123 RBM10P98175 930 aaKnown RBP12.42□□□□□ -0.42
COL12A1-203ENST00000416123 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
COL12A1-203ENST00000416123 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
COL12A1-203ENST00000416123 CENPHQ9H3R5 247 aa12.41□□□□□ -0.42
COL12A1-203ENST00000416123 IQCA1Q86XH1 822 aa12.41□□□□□ -0.42
COL12A1-203ENST00000416123 IQSEC3Q9UPP2 1182 aaPredicted RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 PTPRCP08575 1304 aa12.41□□□□□ -0.42
COL12A1-203ENST00000416123 C14orf93Q9H972 538 aaKnown RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
COL12A1-203ENST00000416123 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 FILIP1Q7Z7B0 1213 aa12.41□□□□□ -0.42
COL12A1-203ENST00000416123 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 C8orf76Q96K31 380 aa12.41□□□□□ -0.42
COL12A1-203ENST00000416123 DHX29Q7Z478 1369 aaKnown RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 AXDND1Q5T1B0 1012 aaPredicted RBP12.41□□□□□ -0.42
COL12A1-203ENST00000416123 DUOX2Q9NRD8 1548 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 TNIP1Q15025 636 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 ST5P78524 1137 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
COL12A1-203ENST00000416123 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
COL12A1-203ENST00000416123 NBPF4Q96M43 638 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 ANKRD62A6NC57 917 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 CCP110O43303 1012 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 NLRP5P59047 1200 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
COL12A1-203ENST00000416123 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.42
COL12A1-203ENST00000416123 KIAA1328Q86T90 577 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 ABCC11Q96J66 1382 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 FAM193AP78312 1265 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 GRPEL1Q9HAV7 217 aa12.4□□□□□ -0.42
COL12A1-203ENST00000416123 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
COL12A1-203ENST00000416123 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.43
COL12A1-203ENST00000416123 RPRD2Q5VT52 1461 aaKnown RBP12.39□□□□□ -0.43
COL12A1-203ENST00000416123 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
COL12A1-203ENST00000416123 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
COL12A1-203ENST00000416123 FEZ1Q99689 392 aa12.39□□□□□ -0.43
COL12A1-203ENST00000416123 GRM1Q13255 1194 aa12.39□□□□□ -0.43
COL12A1-203ENST00000416123 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
COL12A1-203ENST00000416123 CATIPQ7Z7H3 387 aa12.39□□□□□ -0.43
COL12A1-203ENST00000416123 CBFA2T2O43439 604 aa12.39□□□□□ -0.43
COL12A1-203ENST00000416123 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
COL12A1-203ENST00000416123 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
COL12A1-203ENST00000416123 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
COL12A1-203ENST00000416123 LUC7LQ9NQ29 371 aaKnown RBP12.38□□□□□ -0.43
COL12A1-203ENST00000416123 ISM2Q6H9L7 571 aa12.38□□□□□ -0.43
COL12A1-203ENST00000416123 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
COL12A1-203ENST00000416123 CUL5Q93034 780 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms