RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 KHNYNO15037 678 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-203ENST00000415825 UBAP2LQ14157 1087 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-203ENST00000415825 SLFNL1Q499Z3 407 aa7.69□□□□□ -1.18
TRAPPC13-203ENST00000415825 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-203ENST00000415825 NDFIP2Q9NV92 336 aa7.69□□□□□ -1.18
TRAPPC13-203ENST00000415825 EIF4G2P78344 907 aaKnown RBP eCLIP7.68□□□□□ -1.18
TRAPPC13-203ENST00000415825 FAM182BQ5T319 152 aa7.68□□□□□ -1.18
TRAPPC13-203ENST00000415825 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
TRAPPC13-203ENST00000415825 HOXB4P17483 251 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-203ENST00000415825 CD33P20138 364 aa7.67□□□□□ -1.18
TRAPPC13-203ENST00000415825 ZFP64Q9NPA5 681 aa7.67□□□□□ -1.18
TRAPPC13-203ENST00000415825 HRH3Q9Y5N1 445 aa7.67□□□□□ -1.18
TRAPPC13-203ENST00000415825 MAPTP10636 758 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-203ENST00000415825 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
TRAPPC13-203ENST00000415825 CDCA7Q9BWT1 371 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC13-203ENST00000415825 A0A1W2PNR3 127 aa7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 PCBP4P57723 403 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 ZNF468Q5VIY5 522 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 BICDL1Q6ZP65 573 aa7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 BANK1Q8NDB2 785 aa7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 CCDC85AQ96PX6 553 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 NEUROD4Q9HD90 331 aa7.65□□□□□ -1.18
TRAPPC13-203ENST00000415825 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
TRAPPC13-203ENST00000415825 NEUROD1Q13562 356 aa7.64□□□□□ -1.19
TRAPPC13-203ENST00000415825 MARK1Q9P0L2 795 aa7.64□□□□□ -1.19
TRAPPC13-203ENST00000415825 ELOA3CA0A087WX78 387 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-203ENST00000415825 ELOA3DA6NLF2 546 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-203ENST00000415825 SOCS7O14512 581 aa7.63□□□□□ -1.19
TRAPPC13-203ENST00000415825 TNP2Q05952 138 aa7.63□□□□□ -1.19
TRAPPC13-203ENST00000415825 ELOA3BQ3SY89 546 aa7.63□□□□□ -1.19
TRAPPC13-203ENST00000415825 ELOA3Q8NG57 546 aa7.63□□□□□ -1.19
TRAPPC13-203ENST00000415825 GDF10P55107 478 aa7.62□□□□□ -1.19
TRAPPC13-203ENST00000415825 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
TRAPPC13-203ENST00000415825 FCHSD1Q86WN1 690 aa7.62□□□□□ -1.19
TRAPPC13-203ENST00000415825 TRIM11Q96F44 468 aa7.62□□□□□ -1.19
TRAPPC13-203ENST00000415825 INHAP05111 366 aa7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 FAM157BP0CG42 384 aa7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 RSPO4Q2I0M5 234 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 ARTNQ5T4W7 220 aa7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 DNAAF2Q9NVR5 837 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
TRAPPC13-203ENST00000415825 ATP4AP20648 1035 aa7.6□□□□□ -1.19
TRAPPC13-203ENST00000415825 SMTNP53814 917 aa7.6□□□□□ -1.19
TRAPPC13-203ENST00000415825 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
TRAPPC13-203ENST00000415825 DYRK3O43781 588 aa7.59□□□□□ -1.19
TRAPPC13-203ENST00000415825 TPSG1Q9NRR2 321 aa7.59□□□□□ -1.19
TRAPPC13-203ENST00000415825 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC13-203ENST00000415825 ITGB7P26010 798 aa7.58□□□□□ -1.2
TRAPPC13-203ENST00000415825 SYT9Q86SS6 491 aa7.58□□□□□ -1.2
TRAPPC13-203ENST00000415825 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
TRAPPC13-203ENST00000415825 MAP7D1Q3KQU3 841 aa7.57□□□□□ -1.2
TRAPPC13-203ENST00000415825 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
TRAPPC13-203ENST00000415825 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
TRAPPC13-203ENST00000415825 IL27Q8NEV9 243 aa7.57□□□□□ -1.2
TRAPPC13-203ENST00000415825 KLF15Q9UIH9 416 aa7.57□□□□□ -1.2
TRAPPC13-203ENST00000415825 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 C9orf172C9J069 976 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 M0R082 166 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 STAU1O95793 577 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 MTMR14Q8NCE2 650 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 ZNF417Q8TAU3 575 aa7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 ZNF587Q96SQ5 575 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC13-203ENST00000415825 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
TRAPPC13-203ENST00000415825 BACH1O14867 736 aa7.55□□□□□ -1.2
TRAPPC13-203ENST00000415825 SIN3BO75182 1162 aa7.55□□□□□ -1.2
TRAPPC13-203ENST00000415825 NEUROD2Q15784 382 aa7.55□□□□□ -1.2
TRAPPC13-203ENST00000415825 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
TRAPPC13-203ENST00000415825 A6NJY4 79 aa7.54□□□□□ -1.2
TRAPPC13-203ENST00000415825 LRP8Q14114 963 aa7.54□□□□□ -1.2
TRAPPC13-203ENST00000415825 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
TRAPPC13-203ENST00000415825 BCANQ96GW7 911 aa7.54□□□□□ -1.2
TRAPPC13-203ENST00000415825 SCNN1DP51172 638 aa7.53□□□□□ -1.2
TRAPPC13-203ENST00000415825 RAC1P63000 192 aa7.53□□□□□ -1.2
TRAPPC13-203ENST00000415825 NRG1Q02297 640 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-203ENST00000415825 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
TRAPPC13-203ENST00000415825 ADARB2-AS1A8MUL3 147 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 H2AFB2P0C5Z0 115 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 PRDM6Q9NQX0 595 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 ZNF232Q9UNY5 417 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 CHMP3Q9Y3E7 222 aa7.52□□□□□ -1.21
TRAPPC13-203ENST00000415825 PSME1Q06323 249 aa7.51□□□□□ -1.21
TRAPPC13-203ENST00000415825 SEMA3FQ13275 785 aa7.51□□□□□ -1.21
TRAPPC13-203ENST00000415825 TSGA10IPQ3SY00 556 aa7.51□□□□□ -1.21
TRAPPC13-203ENST00000415825 PHTF2Q8N3S3 785 aa7.51□□□□□ -1.21
TRAPPC13-203ENST00000415825 PLPP7Q8NBV4 271 aa7.51□□□□□ -1.21
TRAPPC13-203ENST00000415825 GPC6Q9Y625 555 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-203ENST00000415825 EFSO43281 561 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 LILRB5O75023 590 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 ADH7P40394 386 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 GRIK4Q16099 956 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 LCE3BQ5TA77 95 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 LRRC69Q6ZNQ3 347 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
TRAPPC13-203ENST00000415825 SNRKQ9NRH2 765 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms