RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
CDC42EP1-202ENST00000415670 USPL1Q5W0Q7 1092 aa22.44■■□□□ 1.18
CDC42EP1-202ENST00000415670 TNS4Q8IZW8 715 aa22.44■■□□□ 1.18
CDC42EP1-202ENST00000415670 PLEKHG2Q9H7P9 1386 aa22.43■■□□□ 1.18
CDC42EP1-202ENST00000415670 DNAJC10Q8IXB1 793 aa22.43■■□□□ 1.18
CDC42EP1-202ENST00000415670 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
CDC42EP1-202ENST00000415670 AFDNP55196 1824 aaKnown RBP22.41■■□□□ 1.18
CDC42EP1-202ENST00000415670 POTECB2RU33 542 aa22.4■■□□□ 1.18
CDC42EP1-202ENST00000415670 HSP90AB1P08238 724 aaKnown RBP22.4■■□□□ 1.18
CDC42EP1-202ENST00000415670 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
CDC42EP1-202ENST00000415670 SLC39A6Q13433 755 aa22.39■■□□□ 1.17
CDC42EP1-202ENST00000415670 NFIXQ14938 502 aa22.39■■□□□ 1.17
CDC42EP1-202ENST00000415670 SMC1BQ8NDV3 1235 aa22.39■■□□□ 1.17
CDC42EP1-202ENST00000415670 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.17
CDC42EP1-202ENST00000415670 TNRC6CQ9HCJ0 1690 aaKnown RBP22.39■■□□□ 1.17
CDC42EP1-202ENST00000415670 HSPA1AP0DMV8 641 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-202ENST00000415670 HSPA1BP0DMV9 641 aaKnown RBP22.38■■□□□ 1.17
CDC42EP1-202ENST00000415670 SULT6B1Q6IMI4 303 aa22.37■■□□□ 1.17
CDC42EP1-202ENST00000415670 C1orf141Q5JVX7 400 aa22.36■■□□□ 1.17
CDC42EP1-202ENST00000415670 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
CDC42EP1-202ENST00000415670 SOS1Q07889 1333 aaPredicted RBP22.35■■□□□ 1.17
CDC42EP1-202ENST00000415670 GLTPD2A6NH11 291 aa22.35■■□□□ 1.17
CDC42EP1-202ENST00000415670 AMOTQ4VCS5 1084 aa22.35■■□□□ 1.17
CDC42EP1-202ENST00000415670 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
CDC42EP1-202ENST00000415670 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
CDC42EP1-202ENST00000415670 CARMIL3Q8ND23 1372 aa22.35■■□□□ 1.17
CDC42EP1-202ENST00000415670 ANP32CO43423 234 aa22.34■■□□□ 1.17
CDC42EP1-202ENST00000415670 ZPR1O75312 459 aa22.34■■□□□ 1.17
CDC42EP1-202ENST00000415670 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
CDC42EP1-202ENST00000415670 SCN11AQ9UI33 1791 aa22.33■■□□□ 1.17
CDC42EP1-202ENST00000415670 NFKBIEO00221 500 aa22.33■■□□□ 1.17
CDC42EP1-202ENST00000415670 VEGFAP15692 232 aaPredicted RBP22.33■■□□□ 1.17
CDC42EP1-202ENST00000415670 SERPINB2P05120 415 aa22.32■■□□□ 1.16
CDC42EP1-202ENST00000415670 LMNB1P20700 586 aa22.32■■□□□ 1.16
CDC42EP1-202ENST00000415670 C2CD5Q86YS7 1000 aa22.32■■□□□ 1.16
CDC42EP1-202ENST00000415670 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
CDC42EP1-202ENST00000415670 ZBTB1Q9Y2K1 713 aa22.32■■□□□ 1.16
CDC42EP1-202ENST00000415670 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
CDC42EP1-202ENST00000415670 BICDL1Q6ZP65 573 aa22.31■■□□□ 1.16
CDC42EP1-202ENST00000415670 POTEIP0CG38 1075 aa22.3■■□□□ 1.16
CDC42EP1-202ENST00000415670 POTEJP0CG39 1038 aa22.3■■□□□ 1.16
CDC42EP1-202ENST00000415670 IL13P35225 146 aa22.3■■□□□ 1.16
CDC42EP1-202ENST00000415670 RALBP1Q15311 655 aa22.3■■□□□ 1.16
CDC42EP1-202ENST00000415670 NARFQ9UHQ1 456 aa22.3■■□□□ 1.16
CDC42EP1-202ENST00000415670 NRXN2Q9P2S2 1712 aa22.3■■□□□ 1.16
CDC42EP1-202ENST00000415670 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
CDC42EP1-202ENST00000415670 TTLL6Q8N841 843 aa22.29■■□□□ 1.16
CDC42EP1-202ENST00000415670 SLC52A2Q9HAB3 445 aa22.29■■□□□ 1.16
CDC42EP1-202ENST00000415670 TIAM2Q8IVF5 1701 aa22.28■■□□□ 1.16
CDC42EP1-202ENST00000415670 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.16
CDC42EP1-202ENST00000415670 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.16
CDC42EP1-202ENST00000415670 COL15A1P39059 1388 aa22.26■■□□□ 1.15
CDC42EP1-202ENST00000415670 RNMTO43148 476 aaKnown RBP22.26■■□□□ 1.15
CDC42EP1-202ENST00000415670 MKRN1Q9UHC7 482 aaKnown RBP22.26■■□□□ 1.15
CDC42EP1-202ENST00000415670 VIRMAQ69YN4 1812 aaKnown RBP22.26■■□□□ 1.15
CDC42EP1-202ENST00000415670 C21orf2O43822 256 aa22.25■■□□□ 1.15
CDC42EP1-202ENST00000415670 HMOX1P09601 288 aa22.25■■□□□ 1.15
CDC42EP1-202ENST00000415670 ANKRD31Q8N7Z5 1873 aa22.25■■□□□ 1.15
CDC42EP1-202ENST00000415670 AKAP4Q5JQC9 854 aa22.24■■□□□ 1.15
CDC42EP1-202ENST00000415670 TBC1D9BQ66K14 1250 aa22.24■■□□□ 1.15
CDC42EP1-202ENST00000415670 ZNF622Q969S3 477 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDC42EP1-202ENST00000415670 H0YIN7 160 aa22.23■■□□□ 1.15
CDC42EP1-202ENST00000415670 MIER1Q8N108 512 aa22.22■■□□□ 1.15
CDC42EP1-202ENST00000415670 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
CDC42EP1-202ENST00000415670 ZC3H4Q9UPT8 1303 aaKnown RBP22.22■■□□□ 1.15
CDC42EP1-202ENST00000415670 DDNO94850 711 aaPredicted RBP22.21■■□□□ 1.15
CDC42EP1-202ENST00000415670 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
CDC42EP1-202ENST00000415670 PPP2R1AP30153 589 aa22.2■■□□□ 1.14
CDC42EP1-202ENST00000415670 ERFEQ4G0M1 354 aa22.2■■□□□ 1.14
CDC42EP1-202ENST00000415670 COL11A2P13942 1736 aaPredicted RBP22.2■■□□□ 1.14
CDC42EP1-202ENST00000415670 FOXN1O15353 648 aa22.19■■□□□ 1.14
CDC42EP1-202ENST00000415670 TBC1D2BQ9UPU7 963 aa22.19■■□□□ 1.14
CDC42EP1-202ENST00000415670 FER1L6Q2WGJ9 1857 aa22.18■■□□□ 1.14
CDC42EP1-202ENST00000415670 SLX4Q8IY92 1834 aa22.18■■□□□ 1.14
CDC42EP1-202ENST00000415670 EIF5P55010 431 aaKnown RBP22.18■■□□□ 1.14
CDC42EP1-202ENST00000415670 DICER1Q9UPY3 1922 aaKnown RBP22.18■■□□□ 1.14
CDC42EP1-202ENST00000415670 PRR5LQ6MZQ0 368 aa22.17■■□□□ 1.14
CDC42EP1-202ENST00000415670 MRC1P22897 1456 aa22.16■■□□□ 1.14
CDC42EP1-202ENST00000415670 CACNA1SQ13698 1873 aa22.16■■□□□ 1.14
CDC42EP1-202ENST00000415670 CHADLQ6NUI6 762 aa22.16■■□□□ 1.14
CDC42EP1-202ENST00000415670 DPY19L2Q6NUT2 758 aa22.16■■□□□ 1.14
CDC42EP1-202ENST00000415670 ZNF330Q9Y3S2 320 aaPredicted RBP22.16■■□□□ 1.14
CDC42EP1-202ENST00000415670 ZNF496Q96IT1 587 aaPredicted RBP22.14■■□□□ 1.13
CDC42EP1-202ENST00000415670 CREBZFQ9NS37 354 aa22.14■■□□□ 1.13
CDC42EP1-202ENST00000415670 UBR2Q8IWV8 1755 aa22.13■■□□□ 1.13
CDC42EP1-202ENST00000415670 A1BGP04217 495 aa22.13■■□□□ 1.13
CDC42EP1-202ENST00000415670 PIP4K2AP48426 406 aaPredicted RBP22.13■■□□□ 1.13
CDC42EP1-202ENST00000415670 OLFM4Q6UX06 510 aa22.13■■□□□ 1.13
CDC42EP1-202ENST00000415670 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
CDC42EP1-202ENST00000415670 CCER2I3L3R5 266 aa22.12■■□□□ 1.13
CDC42EP1-202ENST00000415670 KCNQ3O43525 872 aa22.12■■□□□ 1.13
CDC42EP1-202ENST00000415670 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
CDC42EP1-202ENST00000415670 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
CDC42EP1-202ENST00000415670 VEGFBP49765 207 aa22.1■■□□□ 1.13
CDC42EP1-202ENST00000415670 PDE6BP35913 854 aa22.09■■□□□ 1.13
CDC42EP1-202ENST00000415670 PRPF40BQ6NWY9 871 aaKnown RBP22.09■■□□□ 1.13
CDC42EP1-202ENST00000415670 TAOK3Q9H2K8 898 aa22.09■■□□□ 1.13
CDC42EP1-202ENST00000415670 PASKQ96RG2 1323 aa22.08■■□□□ 1.13
CDC42EP1-202ENST00000415670 CNTNAP1P78357 1384 aa22.08■■□□□ 1.12
CDC42EP1-202ENST00000415670 CAMTA2O94983 1202 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms