RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 PRKAR2BP31323 418 aa14.36□□□□□ -0.11
LMCD1-203ENST00000415597 DDR1Q08345 913 aa14.36□□□□□ -0.11
LMCD1-203ENST00000415597 C16orf71Q8IYS4 520 aaPredicted RBP14.36□□□□□ -0.11
LMCD1-203ENST00000415597 ZBTB1Q9Y2K1 713 aa14.36□□□□□ -0.11
LMCD1-203ENST00000415597 ZNF330Q9Y3S2 320 aaPredicted RBP14.36□□□□□ -0.11
LMCD1-203ENST00000415597 SCN11AQ9UI33 1791 aa14.36□□□□□ -0.11
LMCD1-203ENST00000415597 COL15A1P39059 1388 aa14.35□□□□□ -0.11
LMCD1-203ENST00000415597 C4AP0C0L4 1744 aa14.35□□□□□ -0.11
LMCD1-203ENST00000415597 COL5A3P25940 1745 aaPredicted RBP14.35□□□□□ -0.11
LMCD1-203ENST00000415597 BTBD11A6QL63 1104 aa14.35□□□□□ -0.11
LMCD1-203ENST00000415597 SERPINB2P05120 415 aa14.35□□□□□ -0.11
LMCD1-203ENST00000415597 IL17REQ8NFR9 667 aa14.35□□□□□ -0.11
LMCD1-203ENST00000415597 MYH14Q7Z406 1995 aaKnown RBP14.34□□□□□ -0.11
LMCD1-203ENST00000415597 NFIXQ14938 502 aa14.34□□□□□ -0.11
LMCD1-203ENST00000415597 ZNF496Q96IT1 587 aaPredicted RBP14.34□□□□□ -0.11
LMCD1-203ENST00000415597 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
LMCD1-203ENST00000415597 MRC1P22897 1456 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 H0YIN7 160 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 HSPA6P17066 643 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 KCNA3P22001 575 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 CHRNA5P30532 468 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 IL6STP40189 918 aaPredicted RBP14.33□□□□□ -0.12
LMCD1-203ENST00000415597 C9orf131Q5VYM1 1079 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 BICDL1Q6ZP65 573 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
LMCD1-203ENST00000415597 TOMM70O94826 608 aa14.32□□□□□ -0.12
LMCD1-203ENST00000415597 EIF5P55010 431 aaKnown RBP14.32□□□□□ -0.12
LMCD1-203ENST00000415597 TTLL6Q8N841 843 aa14.32□□□□□ -0.12
LMCD1-203ENST00000415597 PPP2R1AP30153 589 aa14.31□□□□□ -0.12
LMCD1-203ENST00000415597 RSPH6AQ9H0K4 717 aa14.31□□□□□ -0.12
LMCD1-203ENST00000415597 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
LMCD1-203ENST00000415597 RNF181Q9P0P0 153 aa14.31□□□□□ -0.12
LMCD1-203ENST00000415597 KIF13BQ9NQT8 1826 aa14.31□□□□□ -0.12
LMCD1-203ENST00000415597 KIF3CO14782 793 aa14.3□□□□□ -0.12
LMCD1-203ENST00000415597 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
LMCD1-203ENST00000415597 PDE6BP35913 854 aa14.3□□□□□ -0.12
LMCD1-203ENST00000415597 C2CD5Q86YS7 1000 aa14.3□□□□□ -0.12
LMCD1-203ENST00000415597 PHACTR3Q96KR7 559 aa14.3□□□□□ -0.12
LMCD1-203ENST00000415597 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
LMCD1-203ENST00000415597 TBC1D2BQ9UPU7 963 aa14.3□□□□□ -0.12
LMCD1-203ENST00000415597 TJP1Q07157 1748 aa14.29□□□□□ -0.12
LMCD1-203ENST00000415597 N4BP2Q86UW6 1770 aaPredicted RBP14.29□□□□□ -0.12
LMCD1-203ENST00000415597 SNRPA1P09661 255 aaKnown RBP14.29□□□□□ -0.12
LMCD1-203ENST00000415597 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
LMCD1-203ENST00000415597 KCPQ6ZWJ8 1503 aa14.29□□□□□ -0.12
LMCD1-203ENST00000415597 COL3A1P02461 1466 aaPredicted RBP14.28□□□□□ -0.12
LMCD1-203ENST00000415597 APLP1P51693 650 aa14.28□□□□□ -0.12
LMCD1-203ENST00000415597 ST5P78524 1137 aa14.28□□□□□ -0.12
LMCD1-203ENST00000415597 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
LMCD1-203ENST00000415597 BRIP1Q9BX63 1249 aa14.28□□□□□ -0.12
LMCD1-203ENST00000415597 BCL2L12Q9HB09 334 aa14.28□□□□□ -0.12
LMCD1-203ENST00000415597 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.12
LMCD1-203ENST00000415597 A1BGP04217 495 aa14.27□□□□□ -0.13
LMCD1-203ENST00000415597 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.13
LMCD1-203ENST00000415597 PNISRQ8TF01 805 aaKnown RBP14.27□□□□□ -0.13
LMCD1-203ENST00000415597 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
LMCD1-203ENST00000415597 ZC3H4Q9UPT8 1303 aaKnown RBP14.26□□□□□ -0.13
LMCD1-203ENST00000415597 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
LMCD1-203ENST00000415597 LMNB1P20700 586 aa14.26□□□□□ -0.13
LMCD1-203ENST00000415597 TAF7Q15545 349 aaPredicted RBP14.26□□□□□ -0.13
LMCD1-203ENST00000415597 TBC1D9BQ66K14 1250 aa14.26□□□□□ -0.13
LMCD1-203ENST00000415597 MCM10Q7L590 875 aa14.26□□□□□ -0.13
LMCD1-203ENST00000415597 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
LMCD1-203ENST00000415597 NMRK2Q9NPI5 230 aa14.26□□□□□ -0.13
LMCD1-203ENST00000415597 DPY19L2Q6NUT2 758 aa14.25□□□□□ -0.13
LMCD1-203ENST00000415597 CLEC4GQ6UXB4 293 aa14.25□□□□□ -0.13
LMCD1-203ENST00000415597 RBM46Q8TBY0 533 aaKnown RBP14.25□□□□□ -0.13
LMCD1-203ENST00000415597 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
LMCD1-203ENST00000415597 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
LMCD1-203ENST00000415597 ADAMTS7Q9UKP4 1686 aa14.24□□□□□ -0.13
LMCD1-203ENST00000415597 SOGA3Q5TF21 947 aa14.24□□□□□ -0.13
LMCD1-203ENST00000415597 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
LMCD1-203ENST00000415597 KCNQ3O43525 872 aa14.23□□□□□ -0.13
LMCD1-203ENST00000415597 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
LMCD1-203ENST00000415597 FSTL1Q12841 308 aa14.23□□□□□ -0.13
LMCD1-203ENST00000415597 PRR5LQ6MZQ0 368 aa14.23□□□□□ -0.13
LMCD1-203ENST00000415597 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
LMCD1-203ENST00000415597 NBPF5PQ86XG9 351 aaPredicted RBP14.23□□□□□ -0.13
LMCD1-203ENST00000415597 RRAGCQ9HB90 399 aa14.23□□□□□ -0.13
LMCD1-203ENST00000415597 KIAA1551Q9HCM1 1747 aa14.22□□□□□ -0.13
LMCD1-203ENST00000415597 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
LMCD1-203ENST00000415597 DCTN1Q14203 1278 aa14.22□□□□□ -0.13
LMCD1-203ENST00000415597 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
LMCD1-203ENST00000415597 VIRMAQ69YN4 1812 aaKnown RBP14.21□□□□□ -0.13
LMCD1-203ENST00000415597 RGL2O15211 777 aa14.21□□□□□ -0.13
LMCD1-203ENST00000415597 VEGFAP15692 232 aaPredicted RBP14.21□□□□□ -0.13
LMCD1-203ENST00000415597 RASSF7Q02833 373 aa14.21□□□□□ -0.13
LMCD1-203ENST00000415597 STYK1Q6J9G0 422 aa14.21□□□□□ -0.13
LMCD1-203ENST00000415597 SMC1BQ8NDV3 1235 aa14.21□□□□□ -0.13
LMCD1-203ENST00000415597 MASTLQ96GX5 879 aa14.21□□□□□ -0.13
LMCD1-203ENST00000415597 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
LMCD1-203ENST00000415597 UBR2Q8IWV8 1755 aa14.2□□□□□ -0.14
LMCD1-203ENST00000415597 GLTPD2A6NH11 291 aa14.2□□□□□ -0.14
LMCD1-203ENST00000415597 C21orf2O43822 256 aa14.2□□□□□ -0.14
LMCD1-203ENST00000415597 BRCA1P38398 1863 aaKnown RBP14.19□□□□□ -0.14
LMCD1-203ENST00000415597 ERFEQ4G0M1 354 aa14.19□□□□□ -0.14
LMCD1-203ENST00000415597 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
LMCD1-203ENST00000415597 NIP7Q9Y221 180 aaKnown RBP eCLIP14.19□□□□□ -0.14
LMCD1-203ENST00000415597 SRGNP10124 158 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms