RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TSPY26PQ9H489 355 aa21.8■■□□□ 1.08
SCARB1-203ENST00000415380 GDPD2Q9HCC8 539 aa21.8■■□□□ 1.08
SCARB1-203ENST00000415380 RGPD8O14715 1765 aaPredicted RBP21.8■■□□□ 1.08
SCARB1-203ENST00000415380 GADD45BO75293 160 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-203ENST00000415380 PPP1R42Q7Z4L9 355 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 RAB11FIP3O75154 756 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 TERF1P54274 439 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 HDGFL1Q5TGJ6 251 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 SYAP1Q96A49 352 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-203ENST00000415380 BABAM1Q9NWV8 329 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 CCDC39Q9UFE4 941 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 WDR33Q9C0J8 1336 aaKnown RBP21.79■■□□□ 1.08
SCARB1-203ENST00000415380 DIP2AQ14689 1571 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 SURF6O75683 361 aaKnown RBP21.79■■□□□ 1.08
SCARB1-203ENST00000415380 PI4K2BQ8TCG2 481 aa21.79■■□□□ 1.08
SCARB1-203ENST00000415380 POLA2Q14181 598 aa21.78■■□□□ 1.08
SCARB1-203ENST00000415380 R3HCC1Q9Y3T6 440 aaKnown RBP21.78■■□□□ 1.08
SCARB1-203ENST00000415380 PLEKHG5O94827 1062 aa21.78■■□□□ 1.08
SCARB1-203ENST00000415380 USP48Q86UV5 1035 aa21.78■■□□□ 1.08
SCARB1-203ENST00000415380 MCM5P33992 734 aa21.77■■□□□ 1.08
SCARB1-203ENST00000415380 NUTM2GQ5VZR2 741 aa21.77■■□□□ 1.08
SCARB1-203ENST00000415380 RHPN1Q8TCX5 695 aa21.77■■□□□ 1.08
SCARB1-203ENST00000415380 RAD50Q92878 1312 aa21.76■■□□□ 1.07
SCARB1-203ENST00000415380 RPAP1Q9BWH6 1393 aaPredicted RBP21.76■■□□□ 1.07
SCARB1-203ENST00000415380 SGSM2O43147 1006 aa21.76■■□□□ 1.07
SCARB1-203ENST00000415380 LTV1Q96GA3 475 aaPredicted RBP21.76■■□□□ 1.07
SCARB1-203ENST00000415380 SNX14Q9Y5W7 946 aa21.75■■□□□ 1.07
SCARB1-203ENST00000415380 EID1Q9Y6B2 187 aa21.75■■□□□ 1.07
SCARB1-203ENST00000415380 SRGAP3O43295 1099 aa21.74■■□□□ 1.07
SCARB1-203ENST00000415380 LSG1Q9H089 658 aaKnown RBP21.74■■□□□ 1.07
SCARB1-203ENST00000415380 PHF14O94880 888 aa21.73■■□□□ 1.07
SCARB1-203ENST00000415380 KIF1BPQ96EK5 621 aa21.73■■□□□ 1.07
SCARB1-203ENST00000415380 TTC14Q96N46 770 aa21.73■■□□□ 1.07
SCARB1-203ENST00000415380 NBPF7P0C2Y1 421 aaPredicted RBP21.73■■□□□ 1.07
SCARB1-203ENST00000415380 USHBP1Q8N6Y0 703 aa21.73■■□□□ 1.07
SCARB1-203ENST00000415380 MARF1Q9Y4F3 1742 aaKnown RBP21.73■■□□□ 1.07
SCARB1-203ENST00000415380 EIF2S2P20042 333 aaKnown RBP21.72■■□□□ 1.07
SCARB1-203ENST00000415380 RASEFQ8IZ41 740 aa21.72■■□□□ 1.07
SCARB1-203ENST00000415380 CNTROBQ8N137 903 aa21.72■■□□□ 1.07
SCARB1-203ENST00000415380 TMEM87AQ8NBN3 555 aa21.72■■□□□ 1.07
SCARB1-203ENST00000415380 TBX22Q9Y458 520 aa21.72■■□□□ 1.07
SCARB1-203ENST00000415380 AK2P54819 239 aa21.71■■□□□ 1.07
SCARB1-203ENST00000415380 CSPP1Q1MSJ5 1256 aa21.71■■□□□ 1.07
SCARB1-203ENST00000415380 PDCL3Q9H2J4 239 aa21.71■■□□□ 1.07
SCARB1-203ENST00000415380 CEBPAP49715 358 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-203ENST00000415380 LARP6Q9BRS8 491 aaKnown RBP21.7■■□□□ 1.06
SCARB1-203ENST00000415380 CNPY2Q9Y2B0 182 aa21.7■■□□□ 1.06
SCARB1-203ENST00000415380 ZSCAN22P10073 491 aaPredicted RBP21.7■■□□□ 1.06
SCARB1-203ENST00000415380 BEND3Q5T5X7 828 aa21.7■■□□□ 1.06
SCARB1-203ENST00000415380 RUFY3Q7L099 469 aa21.7■■□□□ 1.06
SCARB1-203ENST00000415380 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
SCARB1-203ENST00000415380 LIMCH1Q9UPQ0 1083 aa21.69■■□□□ 1.06
SCARB1-203ENST00000415380 PTMAP06454 111 aaKnown RBP21.69■■□□□ 1.06
SCARB1-203ENST00000415380 ABTB2Q8N961 1025 aa21.69■■□□□ 1.06
SCARB1-203ENST00000415380 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
SCARB1-203ENST00000415380 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
SCARB1-203ENST00000415380 EIF4A1P60842 406 aaKnown RBP21.68■■□□□ 1.06
SCARB1-203ENST00000415380 SPG7Q9UQ90 795 aa21.68■■□□□ 1.06
SCARB1-203ENST00000415380 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
SCARB1-203ENST00000415380 DNAAF4Q8WXU2 420 aa21.68■■□□□ 1.06
SCARB1-203ENST00000415380 PI4KAP2A4QPH2 592 aa21.67■■□□□ 1.06
SCARB1-203ENST00000415380 SYT1P21579 422 aa21.67■■□□□ 1.06
SCARB1-203ENST00000415380 CCDC183Q5T5S1 534 aa21.67■■□□□ 1.06
SCARB1-203ENST00000415380 PI4KAP1Q8N8J0 262 aa21.67■■□□□ 1.06
SCARB1-203ENST00000415380 TCHHQ07283 1943 aa21.67■■□□□ 1.06
SCARB1-203ENST00000415380 STX6O43752 255 aa21.67■■□□□ 1.06
SCARB1-203ENST00000415380 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.67■■□□□ 1.06
SCARB1-203ENST00000415380 USP42Q9H9J4 1324 aaKnown RBP21.67■■□□□ 1.06
SCARB1-203ENST00000415380 ANKARQ7Z5J8 1434 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 SLIT1O75093 1534 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 UQCRHLA0A096LP55 91 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 UQCRHP07919 91 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 VSIG10Q8N0Z9 540 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 FAM184AQ8NB25 1140 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.66■■□□□ 1.062e-6■■□□□ 13.2
SCARB1-203ENST00000415380 CRYBG1Q9Y4K1 1723 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 ARHGAP23Q9P227 1491 aa21.66■■□□□ 1.06
SCARB1-203ENST00000415380 CPA1P15085 419 aa21.65■■□□□ 1.06
SCARB1-203ENST00000415380 UVSSAQ2YD98 709 aa21.65■■□□□ 1.06
SCARB1-203ENST00000415380 HSP90AB4PQ58FF6 505 aa21.65■■□□□ 1.06
SCARB1-203ENST00000415380 SMC3Q9UQE7 1217 aa21.65■■□□□ 1.06
SCARB1-203ENST00000415380 USP54Q70EL1 1684 aa21.65■■□□□ 1.06
SCARB1-203ENST00000415380 TTC41PQ6P2S7 1318 aa21.65■■□□□ 1.06
SCARB1-203ENST00000415380 F13A1P00488 732 aa21.64■■□□□ 1.06
SCARB1-203ENST00000415380 CASTP20810 708 aaKnown RBP21.64■■□□□ 1.06
SCARB1-203ENST00000415380 TPRNQ4KMQ1 711 aa21.64■■□□□ 1.06
SCARB1-203ENST00000415380 KIF13AQ9H1H9 1805 aa21.64■■□□□ 1.06
SCARB1-203ENST00000415380 MED1Q15648 1581 aaPredicted RBP21.64■■□□□ 1.06
SCARB1-203ENST00000415380 KCNQ3O43525 872 aa21.64■■□□□ 1.05
SCARB1-203ENST00000415380 GLRX3O76003 335 aaKnown RBP21.64■■□□□ 1.05
SCARB1-203ENST00000415380 LARGE1O95461 756 aa21.64■■□□□ 1.05
SCARB1-203ENST00000415380 HOXB7P09629 217 aa21.64■■□□□ 1.05
SCARB1-203ENST00000415380 UBE2HP62256 183 aa21.64■■□□□ 1.05
SCARB1-203ENST00000415380 ANXA1P04083 346 aa21.64■■□□□ 1.05
SCARB1-203ENST00000415380 OS9Q13438 667 aaPredicted RBP21.64■■□□□ 1.05
SCARB1-203ENST00000415380 KIAA2012Q0VF49 1180 aa21.63■■□□□ 1.05
SCARB1-203ENST00000415380 DIAPH3Q9NSV4 1193 aa21.63■■□□□ 1.05
SCARB1-203ENST00000415380 HYPKQ9NX55 129 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms