RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
LINC01090-201ENST00000415357 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
LINC01090-201ENST00000415357 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
LINC01090-201ENST00000415357 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
LINC01090-201ENST00000415357 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
LINC01090-201ENST00000415357 HSP90AB1P08238 724 aaKnown RBP12.92□□□□□ -0.34
LINC01090-201ENST00000415357 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
LINC01090-201ENST00000415357 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
LINC01090-201ENST00000415357 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
LINC01090-201ENST00000415357 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
LINC01090-201ENST00000415357 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
LINC01090-201ENST00000415357 PTGER2P43116 358 aa12.91□□□□□ -0.34
LINC01090-201ENST00000415357 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
LINC01090-201ENST00000415357 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 SIK1P57059 783 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 CABP4P57796 275 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
LINC01090-201ENST00000415357 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
LINC01090-201ENST00000415357 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
LINC01090-201ENST00000415357 ITPK1Q13572 414 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 SMIM5Q71RC9 77 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 AMIGO3Q86WK7 504 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
LINC01090-201ENST00000415357 LINC00116Q8NCU8 138 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 LGR6Q9HBX8 967 aa12.89□□□□□ -0.35
LINC01090-201ENST00000415357 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
LINC01090-201ENST00000415357 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
LINC01090-201ENST00000415357 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
LINC01090-201ENST00000415357 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
LINC01090-201ENST00000415357 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
LINC01090-201ENST00000415357 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
LINC01090-201ENST00000415357 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
LINC01090-201ENST00000415357 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
LINC01090-201ENST00000415357 AK7Q96M32 723 aa12.87□□□□□ -0.35
LINC01090-201ENST00000415357 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
LINC01090-201ENST00000415357 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 MRC1P22897 1456 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 VIRMAQ69YN4 1812 aaKnown RBP12.86□□□□□ -0.35
LINC01090-201ENST00000415357 PHF14O94880 888 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 UBR3Q6ZT12 1888 aa12.86□□□□□ -0.35
LINC01090-201ENST00000415357 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
LINC01090-201ENST00000415357 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
LINC01090-201ENST00000415357 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
LINC01090-201ENST00000415357 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01090-201ENST00000415357 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
LINC01090-201ENST00000415357 PHACTR3Q96KR7 559 aa12.85□□□□□ -0.35
LINC01090-201ENST00000415357 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
LINC01090-201ENST00000415357 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
LINC01090-201ENST00000415357 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
LINC01090-201ENST00000415357 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
LINC01090-201ENST00000415357 ARXQ96QS3 562 aa12.84□□□□□ -0.35
LINC01090-201ENST00000415357 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
LINC01090-201ENST00000415357 RYDENQ9NUL5 291 aaKnown RBP12.84□□□□□ -0.35
LINC01090-201ENST00000415357 COL5A3P25940 1745 aaPredicted RBP12.84□□□□□ -0.35
LINC01090-201ENST00000415357 TJP1Q07157 1748 aa12.84□□□□□ -0.35
LINC01090-201ENST00000415357 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
LINC01090-201ENST00000415357 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.35
LINC01090-201ENST00000415357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
LINC01090-201ENST00000415357 GNPATO15228 680 aa12.83□□□□□ -0.36
LINC01090-201ENST00000415357 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
LINC01090-201ENST00000415357 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
LINC01090-201ENST00000415357 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
LINC01090-201ENST00000415357 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
LINC01090-201ENST00000415357 POLD1P28340 1107 aa12.81□□□□□ -0.36
LINC01090-201ENST00000415357 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
LINC01090-201ENST00000415357 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
LINC01090-201ENST00000415357 IL17REQ8NFR9 667 aa12.81□□□□□ -0.36
LINC01090-201ENST00000415357 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
LINC01090-201ENST00000415357 SSFA2P28290 1259 aa12.8□□□□□ -0.36
LINC01090-201ENST00000415357 SYT17Q9BSW7 474 aa12.8□□□□□ -0.36
LINC01090-201ENST00000415357 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
LINC01090-201ENST00000415357 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
LINC01090-201ENST00000415357 PPP1R37O75864 691 aa12.79□□□□□ -0.36
LINC01090-201ENST00000415357 FCHSD2O94868 740 aa12.79□□□□□ -0.36
LINC01090-201ENST00000415357 RALBP1Q15311 655 aa12.79□□□□□ -0.36
LINC01090-201ENST00000415357 DNAJC10Q8IXB1 793 aa12.79□□□□□ -0.36
LINC01090-201ENST00000415357 MYH14Q7Z406 1995 aaKnown RBP12.79□□□□□ -0.36
LINC01090-201ENST00000415357 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
LINC01090-201ENST00000415357 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
LINC01090-201ENST00000415357 TEFQ10587 303 aa12.78□□□□□ -0.36
LINC01090-201ENST00000415357 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
LINC01090-201ENST00000415357 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
LINC01090-201ENST00000415357 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
LINC01090-201ENST00000415357 C4AP0C0L4 1744 aa12.77□□□□□ -0.36
LINC01090-201ENST00000415357 G3V3G9 751 aa12.77□□□□□ -0.37
LINC01090-201ENST00000415357 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
LINC01090-201ENST00000415357 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
LINC01090-201ENST00000415357 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
LINC01090-201ENST00000415357 MCM10Q7L590 875 aa12.77□□□□□ -0.37
LINC01090-201ENST00000415357 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
LINC01090-201ENST00000415357 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms