RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 ADCY9O60503 1353 aa23.83■■□□□ 1.4
PPM1N-206ENST00000415077 SPATA31A1Q5TZJ5 1347 aa23.82■■□□□ 1.4
PPM1N-206ENST00000415077 CHD1LQ86WJ1 897 aa23.82■■□□□ 1.4
PPM1N-206ENST00000415077 THRAP3Q9Y2W1 955 aaKnown RBP23.82■■□□□ 1.4
PPM1N-206ENST00000415077 ANKRD45Q5TZF3 282 aa23.82■■□□□ 1.4
PPM1N-206ENST00000415077 KSR2Q6VAB6 950 aa23.82■■□□□ 1.4
PPM1N-206ENST00000415077 CDCA7Q9BWT1 371 aaPredicted RBP23.82■■□□□ 1.4
PPM1N-206ENST00000415077 USP44Q9H0E7 712 aa23.82■■□□□ 1.4
PPM1N-206ENST00000415077 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
PPM1N-206ENST00000415077 DDX58O95786 925 aaKnown RBP23.81■■□□□ 1.4
PPM1N-206ENST00000415077 MYL6BP14649 208 aa23.81■■□□□ 1.4
PPM1N-206ENST00000415077 BEND3Q5T5X7 828 aa23.81■■□□□ 1.4
PPM1N-206ENST00000415077 CERKQ8TCT0 537 aa23.81■■□□□ 1.4
PPM1N-206ENST00000415077 MAP3K2Q9Y2U5 619 aa23.81■■□□□ 1.4
PPM1N-206ENST00000415077 JCADQ9P266 1359 aa23.81■■□□□ 1.4
PPM1N-206ENST00000415077 LNPKQ9C0E8 428 aa23.8■■□□□ 1.4
PPM1N-206ENST00000415077 DCTPP1Q9H773 170 aa23.8■■□□□ 1.4
PPM1N-206ENST00000415077 AIMP1Q12904 312 aaKnown RBP23.8■■□□□ 1.4
PPM1N-206ENST00000415077 C8orf34Q49A92 452 aa23.8■■□□□ 1.4
PPM1N-206ENST00000415077 SLIT2O94813 1529 aa23.79■■□□□ 1.4
PPM1N-206ENST00000415077 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
PPM1N-206ENST00000415077 HMMRO75330 724 aa23.78■■□□□ 1.4
PPM1N-206ENST00000415077 UBTFL1P0CB47 393 aaPredicted RBP23.78■■□□□ 1.4
PPM1N-206ENST00000415077 TOGARAM1Q9Y4F4 1720 aa23.78■■□□□ 1.4
PPM1N-206ENST00000415077 CCDC9Q9Y3X0 531 aaKnown RBP23.78■■□□□ 1.4
PPM1N-206ENST00000415077 SPATA31A5Q5VU36 1347 aa23.77■■□□□ 1.4
PPM1N-206ENST00000415077 SPATA31A7Q8IWB4 1347 aa23.77■■□□□ 1.4
PPM1N-206ENST00000415077 NWD2Q9ULI1 1742 aa23.77■■□□□ 1.4
PPM1N-206ENST00000415077 UBR2Q8IWV8 1755 aa23.76■■□□□ 1.39
PPM1N-206ENST00000415077 WNK3Q9BYP7 1800 aa23.76■■□□□ 1.39
PPM1N-206ENST00000415077 COPS6Q7L5N1 327 aa23.76■■□□□ 1.39
PPM1N-206ENST00000415077 PIGBQ92521 554 aa23.76■■□□□ 1.39
PPM1N-206ENST00000415077 LRRFIP2Q9Y608 721 aaKnown RBP23.76■■□□□ 1.39
PPM1N-206ENST00000415077 PAPPAQ13219 1627 aa23.76■■□□□ 1.39
PPM1N-206ENST00000415077 KCPQ6ZWJ8 1503 aa23.75■■□□□ 1.39
PPM1N-206ENST00000415077 TNS2Q63HR2 1409 aa23.75■■□□□ 1.39
PPM1N-206ENST00000415077 DDB1Q16531 1140 aa23.75■■□□□ 1.39
PPM1N-206ENST00000415077 XAGE3Q8WTP9 111 aa23.75■■□□□ 1.39
PPM1N-206ENST00000415077 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
PPM1N-206ENST00000415077 GLI3P10071 1580 aa23.75■■□□□ 1.39
PPM1N-206ENST00000415077 RIC3Q7Z5B4 369 aa23.74■■□□□ 1.39
PPM1N-206ENST00000415077 NGLY1Q96IV0 654 aa23.74■■□□□ 1.39
PPM1N-206ENST00000415077 ALDH1L1O75891 902 aa23.74■■□□□ 1.39
PPM1N-206ENST00000415077 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
PPM1N-206ENST00000415077 LRP10Q7Z4F1 713 aa23.74■■□□□ 1.39
PPM1N-206ENST00000415077 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
PPM1N-206ENST00000415077 LAMB4A4D0S4 1761 aa23.73■■□□□ 1.39
PPM1N-206ENST00000415077 NBPF7P0C2Y1 421 aaPredicted RBP23.72■■□□□ 1.39
PPM1N-206ENST00000415077 ATP8B2P98198 1209 aa23.72■■□□□ 1.39
PPM1N-206ENST00000415077 ZBTB47Q9UFB7 747 aaPredicted RBP23.72■■□□□ 1.39
PPM1N-206ENST00000415077 ASAP1Q9ULH1 1129 aa23.72■■□□□ 1.39
PPM1N-206ENST00000415077 ERBB4Q15303 1308 aa23.72■■□□□ 1.39
PPM1N-206ENST00000415077 BARGINQ6ZT62 677 aa23.72■■□□□ 1.39
PPM1N-206ENST00000415077 LINS1Q8NG48 757 aa23.72■■□□□ 1.39
PPM1N-206ENST00000415077 ANKRD13DQ6ZTN6 518 aa23.71■■□□□ 1.39
PPM1N-206ENST00000415077 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
PPM1N-206ENST00000415077 SPATA31A6Q5VVP1 1343 aa23.71■■□□□ 1.39
PPM1N-206ENST00000415077 ATG3Q9NT62 314 aa23.71■■□□□ 1.39
PPM1N-206ENST00000415077 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
PPM1N-206ENST00000415077 ITGB4P16144 1822 aa23.7■■□□□ 1.38
PPM1N-206ENST00000415077 NEXNQ0ZGT2 675 aa23.7■■□□□ 1.38
PPM1N-206ENST00000415077 SYTL4Q96C24 671 aaPredicted RBP23.7■■□□□ 1.38
PPM1N-206ENST00000415077 LRP6O75581 1613 aa23.7■■□□□ 1.38
PPM1N-206ENST00000415077 KAT6BQ8WYB5 2073 aa23.69■■□□□ 1.38
PPM1N-206ENST00000415077 PNMA6EA0A0J9YXQ4 647 aa23.69■■□□□ 1.38
PPM1N-206ENST00000415077 BCL9O00512 1426 aa23.69■■□□□ 1.38
PPM1N-206ENST00000415077 NBPF26B4DH59 902 aa23.69■■□□□ 1.38
PPM1N-206ENST00000415077 ANP32AP39687 249 aaKnown RBP23.69■■□□□ 1.38
PPM1N-206ENST00000415077 NBPF14Q5TI25 921 aa23.69■■□□□ 1.38
PPM1N-206ENST00000415077 NBPF10Q6P3W6 841 aaKnown RBP23.69■■□□□ 1.38
PPM1N-206ENST00000415077 NBPF15Q8N660 670 aa23.69■■□□□ 1.38
PPM1N-206ENST00000415077 APBB1O00213 710 aa23.67■■□□□ 1.38
PPM1N-206ENST00000415077 A1BGP04217 495 aa23.67■■□□□ 1.38
PPM1N-206ENST00000415077 VSIG10Q8N0Z9 540 aa23.67■■□□□ 1.38
PPM1N-206ENST00000415077 METTL22Q9BUU2 404 aaPredicted RBP23.67■■□□□ 1.38
PPM1N-206ENST00000415077 BCL9LQ86UU0 1499 aa23.67■■□□□ 1.38
PPM1N-206ENST00000415077 PRIM1P49642 420 aaKnown RBP23.67■■□□□ 1.38
PPM1N-206ENST00000415077 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
PPM1N-206ENST00000415077 TEX13AQ9BXU3 409 aaPredicted RBP23.67■■□□□ 1.38
PPM1N-206ENST00000415077 HDAC5Q9UQL6 1122 aa23.67■■□□□ 1.38
PPM1N-206ENST00000415077 VPS72Q15906 364 aa23.66■■□□□ 1.38
PPM1N-206ENST00000415077 FNBP4Q8N3X1 1017 aaPredicted RBP23.66■■□□□ 1.38
PPM1N-206ENST00000415077 RBM42Q9BTD8 480 aaKnown RBP23.66■■□□□ 1.38
PPM1N-206ENST00000415077 IGKV5-2P06315 115 aa23.65■■□□□ 1.38
PPM1N-206ENST00000415077 BCL11AQ9H165 835 aa23.65■■□□□ 1.38
PPM1N-206ENST00000415077 GRM8O00222 908 aa23.65■■□□□ 1.38
PPM1N-206ENST00000415077 PPP1R42Q7Z4L9 355 aa23.65■■□□□ 1.38
PPM1N-206ENST00000415077 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
PPM1N-206ENST00000415077 PLBD2Q8NHP8 589 aa23.65■■□□□ 1.38
PPM1N-206ENST00000415077 MYD88Q99836 296 aa23.65■■□□□ 1.38
PPM1N-206ENST00000415077 SSH3Q8TE77 659 aa23.64■■□□□ 1.38
PPM1N-206ENST00000415077 EXOC6BQ9Y2D4 811 aa23.64■■□□□ 1.38
PPM1N-206ENST00000415077 FAM98CQ17RN3 349 aaKnown RBP23.63■■□□□ 1.37
PPM1N-206ENST00000415077 NEURL1BA8MQ27 555 aa23.63■■□□□ 1.37
PPM1N-206ENST00000415077 SRGAP3O43295 1099 aa23.63■■□□□ 1.37
PPM1N-206ENST00000415077 HSPA1LP34931 641 aa23.63■■□□□ 1.37
PPM1N-206ENST00000415077 UTYO14607 1347 aa23.62■■□□□ 1.37
PPM1N-206ENST00000415077 SMARCA5O60264 1052 aaPredicted RBP23.62■■□□□ 1.37
PPM1N-206ENST00000415077 STARD3NLO95772 234 aa23.62■■□□□ 1.37
PPM1N-206ENST00000415077 DNAJC10Q8IXB1 793 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms