RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CERS3Q8IU89 383 aa5.14□□□□□ -1.59
SF3B1-203ENST00000414174 FAM177A1Q8N128 213 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-203ENST00000414174 BANK1Q8NDB2 785 aa5.14□□□□□ -1.59
SF3B1-203ENST00000414174 CCDC136Q96JN2 1154 aa5.14□□□□□ -1.59
SF3B1-203ENST00000414174 GGA1Q9UJY5 639 aa5.14□□□□□ -1.59
SF3B1-203ENST00000414174 ATXN7L1Q9ULK2 861 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-203ENST00000414174 MTMR7Q9Y216 660 aa5.14□□□□□ -1.59
SF3B1-203ENST00000414174 SOCS7O14512 581 aa5.13□□□□□ -1.59
SF3B1-203ENST00000414174 C2CD2LO14523 706 aa5.13□□□□□ -1.59
SF3B1-203ENST00000414174 GIGYF1O75420 1035 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-203ENST00000414174 BMP4P12644 408 aa5.13□□□□□ -1.59
SF3B1-203ENST00000414174 CLN3Q13286 438 aa5.13□□□□□ -1.59
SF3B1-203ENST00000414174 SPATA31C1P0DKV0 1188 aa5.12□□□□□ -1.59
SF3B1-203ENST00000414174 ARAFP10398 606 aa5.12□□□□□ -1.59
SF3B1-203ENST00000414174 RBM25P49756 843 aaKnown RBP5.12□□□□□ -1.59
SF3B1-203ENST00000414174 SETQ01105 290 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-203ENST00000414174 ANP32EQ9BTT0 268 aa5.12□□□□□ -1.59
SF3B1-203ENST00000414174 CWC22Q9HCG8 908 aaKnown RBP5.12□□□□□ -1.59
SF3B1-203ENST00000414174 PCDHB9Q9Y5E1 797 aa5.12□□□□□ -1.59
SF3B1-203ENST00000414174 A0A1B0GTH6 734 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 DYRK3O43781 588 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 NCLP19338 710 aaKnown RBP5.11□□□□□ -1.59
SF3B1-203ENST00000414174 ERVK-9P63128 1117 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 IRX6P78412 446 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-203ENST00000414174 NR1H3Q13133 447 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 ERICH6BQ5W0A0 696 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 RNF135Q8IUD6 432 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 PNMA1Q8ND90 353 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 NDFIP2Q9NV92 336 aa5.11□□□□□ -1.59
SF3B1-203ENST00000414174 CTBSQ01459 385 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 IRF5Q13568 498 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 TEX2Q8IWB9 1127 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 ZNF428Q96B54 188 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 TRAIPQ9BWF2 469 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 CLSPNQ9HAW4 1339 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 TPSG1Q9NRR2 321 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 TBC1D2BQ9UPU7 963 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 NDUFB9Q9Y6M9 179 aa5.1□□□□□ -1.59
SF3B1-203ENST00000414174 E9PSI1 815 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 FGFR3P22607 806 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 SCTRP47872 440 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 PRSS36Q5K4E3 855 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 TMCO4Q5TGY1 634 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 TMED8Q6PL24 325 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-203ENST00000414174 CHSY3Q70JA7 882 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 FOXD4L4Q8WXT5 416 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-203ENST00000414174 USP35Q9P2H5 1018 aa5.09□□□□□ -1.59
SF3B1-203ENST00000414174 ARID4BQ4LE39 1312 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-203ENST00000414174 BNIP3LO60238 219 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 CSB-PGBD3P0DP91 1061 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 MFAP1P55081 439 aaKnown RBP5.08□□□□□ -1.6
SF3B1-203ENST00000414174 LRP8Q14114 963 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 CYP2U1Q7Z449 544 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 PGBD3Q8N328 593 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 TRIM11Q96F44 468 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 PLVAPQ9BX97 442 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 PRDM16Q9HAZ2 1276 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 GPAMQ9HCL2 828 aa5.08□□□□□ -1.6
SF3B1-203ENST00000414174 A0A0U1RQG5 324 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-203ENST00000414174 SPDYE3A6NKU9 549 aa5.07□□□□□ -1.6
SF3B1-203ENST00000414174 NEURL1BA8MQ27 555 aa5.07□□□□□ -1.6
SF3B1-203ENST00000414174 HYAL3O43820 417 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-203ENST00000414174 CCDC27Q2M243 656 aa5.07□□□□□ -1.6
SF3B1-203ENST00000414174 EFHC2Q5JST6 749 aa5.07□□□□□ -1.6
SF3B1-203ENST00000414174 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
SF3B1-203ENST00000414174 ABHD17AQ96GS6 310 aa5.07□□□□□ -1.6
SF3B1-203ENST00000414174 AVENQ9NQS1 362 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-203ENST00000414174 PPM1GO15355 546 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-203ENST00000414174 MAFGO15525 162 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 H2AFB1P0C5Y9 115 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 H2AFB2P0C5Z0 115 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 RBM10P98175 930 aaKnown RBP5.06□□□□□ -1.6
SF3B1-203ENST00000414174 CENPCQ03188 943 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 RNF20Q5VTR2 975 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 CCDC85AQ96PX6 553 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-203ENST00000414174 PLCD4Q9BRC7 762 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 ESYT1Q9BSJ8 1104 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 OSBPL3Q9H4L5 887 aa5.06□□□□□ -1.6
SF3B1-203ENST00000414174 ARID3CA6NKF2 412 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 APBB1O00213 710 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 TRAK2O60296 914 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 GNRH1P01148 92 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 PTMSP20962 102 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 ADH6P28332 368 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 MSX1P28360 303 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 MCM6Q14566 821 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 TSGA10IPQ3SY00 556 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 CDCA7Q9BWT1 371 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-203ENST00000414174 KLF15Q9UIH9 416 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 HRH3Q9Y5N1 445 aa5.05□□□□□ -1.6
SF3B1-203ENST00000414174 TXKP42681 527 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 FAM182BQ5T319 152 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 FIGNL1Q6PIW4 674 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 PHTF2Q8N3S3 785 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 CRISPLD1Q9H336 500 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 RUBCNLQ9H714 662 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 GDPD2Q9HCC8 539 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 CEP126Q9P2H0 1117 aa5.04□□□□□ -1.6
SF3B1-203ENST00000414174 PCDHB11Q9Y5F2 797 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms