RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 POLRMTO00411 1230 aaKnown RBP22.34■■□□□ 1.17
SF1-207ENST00000413951 DDR1Q08345 913 aa22.34■■□□□ 1.17
SF1-207ENST00000413951 COL15A1P39059 1388 aa22.34■■□□□ 1.17
SF1-207ENST00000413951 KCNA3P22001 575 aa22.33■■□□□ 1.17
SF1-207ENST00000413951 NPM2Q86SE8 214 aaKnown RBP22.33■■□□□ 1.17
SF1-207ENST00000413951 ADAMTS7Q9UKP4 1686 aa22.33■■□□□ 1.16
SF1-207ENST00000413951 KIAA1551Q9HCM1 1747 aa22.32■■□□□ 1.16
SF1-207ENST00000413951 HSPA6P17066 643 aa22.32■■□□□ 1.16
SF1-207ENST00000413951 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
SF1-207ENST00000413951 ZBTB1Q9Y2K1 713 aa22.32■■□□□ 1.16
SF1-207ENST00000413951 N4BP2Q86UW6 1770 aaPredicted RBP22.32■■□□□ 1.16
SF1-207ENST00000413951 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
SF1-207ENST00000413951 COL3A1P02461 1466 aaPredicted RBP22.3■■□□□ 1.16
SF1-207ENST00000413951 ZNF790Q6PG37 636 aa22.3■■□□□ 1.16
SF1-207ENST00000413951 KIF3CO14782 793 aa22.29■■□□□ 1.16
SF1-207ENST00000413951 CANXP27824 592 aaKnown RBP22.29■■□□□ 1.16
SF1-207ENST00000413951 NFIXQ14938 502 aa22.28■■□□□ 1.16
SF1-207ENST00000413951 IL17REQ8NFR9 667 aa22.28■■□□□ 1.16
SF1-207ENST00000413951 FMNL2Q96PY5 1086 aa22.28■■□□□ 1.16
SF1-207ENST00000413951 PDZRN3Q9UPQ7 1066 aa22.28■■□□□ 1.16
SF1-207ENST00000413951 HEG1Q9ULI3 1381 aa22.27■■□□□ 1.16
SF1-207ENST00000413951 TOMM70O94826 608 aa22.27■■□□□ 1.16
SF1-207ENST00000413951 EIF5P55010 431 aaKnown RBP22.27■■□□□ 1.16
SF1-207ENST00000413951 C9orf131Q5VYM1 1079 aa22.27■■□□□ 1.16
SF1-207ENST00000413951 SERPINB2P05120 415 aa22.26■■□□□ 1.15
SF1-207ENST00000413951 CHRNA5P30532 468 aa22.26■■□□□ 1.15
SF1-207ENST00000413951 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
SF1-207ENST00000413951 ZNF496Q96IT1 587 aaPredicted RBP22.26■■□□□ 1.15
SF1-207ENST00000413951 KDM2BQ8NHM5 1336 aa22.26■■□□□ 1.15
SF1-207ENST00000413951 PRKAR2BP31323 418 aa22.25■■□□□ 1.15
SF1-207ENST00000413951 IL6STP40189 918 aaPredicted RBP22.25■■□□□ 1.15
SF1-207ENST00000413951 ARFGEF1Q9Y6D6 1849 aa22.24■■□□□ 1.15
SF1-207ENST00000413951 BRCA1P38398 1863 aaKnown RBP22.24■■□□□ 1.15
SF1-207ENST00000413951 BTBD11A6QL63 1104 aa22.24■■□□□ 1.15
SF1-207ENST00000413951 C16orf71Q8IYS4 520 aaPredicted RBP22.24■■□□□ 1.15
SF1-207ENST00000413951 CEMIPQ8WUJ3 1361 aa22.24■■□□□ 1.15
SF1-207ENST00000413951 UBR2Q8IWV8 1755 aa22.23■■□□□ 1.15
SF1-207ENST00000413951 H0YIN7 160 aa22.23■■□□□ 1.15
SF1-207ENST00000413951 U2AF1L5P0DN76 240 aaPredicted RBP22.23■■□□□ 1.15
SF1-207ENST00000413951 U2AF1Q01081 240 aaKnown RBP eCLIP22.23■■□□□ 1.151e-19■■■■■ 60.2
SF1-207ENST00000413951 RSPH6AQ9H0K4 717 aa22.23■■□□□ 1.15
SF1-207ENST00000413951 ZC3H4Q9UPT8 1303 aaKnown RBP22.23■■□□□ 1.15
SF1-207ENST00000413951 VIRMAQ69YN4 1812 aaKnown RBP22.22■■□□□ 1.15
SF1-207ENST00000413951 TTLL6Q8N841 843 aa22.22■■□□□ 1.15
SF1-207ENST00000413951 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
SF1-207ENST00000413951 RNF181Q9P0P0 153 aa22.22■■□□□ 1.15
SF1-207ENST00000413951 NEFMP07197 916 aa22.21■■□□□ 1.15
SF1-207ENST00000413951 APLP1P51693 650 aa22.21■■□□□ 1.15
SF1-207ENST00000413951 HTATSF1O43719 755 aaKnown RBP22.2■■□□□ 1.14
SF1-207ENST00000413951 PPP2R1AP30153 589 aa22.2■■□□□ 1.14
SF1-207ENST00000413951 PDE6BP35913 854 aa22.2■■□□□ 1.14
SF1-207ENST00000413951 RALBP1Q15311 655 aa22.2■■□□□ 1.14
SF1-207ENST00000413951 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
SF1-207ENST00000413951 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
SF1-207ENST00000413951 ZNF330Q9Y3S2 320 aaPredicted RBP22.2■■□□□ 1.14
SF1-207ENST00000413951 BICDL1Q6ZP65 573 aa22.19■■□□□ 1.14
SF1-207ENST00000413951 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
SF1-207ENST00000413951 RBM46Q8TBY0 533 aaKnown RBP22.18■■□□□ 1.14
SF1-207ENST00000413951 SETDB2Q96T68 719 aa22.18■■□□□ 1.14
SF1-207ENST00000413951 BRIP1Q9BX63 1249 aa22.18■■□□□ 1.14
SF1-207ENST00000413951 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
SF1-207ENST00000413951 NPHP1O15259 732 aa22.17■■□□□ 1.14
SF1-207ENST00000413951 LMNB1P20700 586 aa22.17■■□□□ 1.14
SF1-207ENST00000413951 PRKRIP1Q9H875 184 aaPredicted RBP22.17■■□□□ 1.14
SF1-207ENST00000413951 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
SF1-207ENST00000413951 TBC1D2BQ9UPU7 963 aa22.17■■□□□ 1.14
SF1-207ENST00000413951 SNRPA1P09661 255 aaKnown RBP22.16■■□□□ 1.14
SF1-207ENST00000413951 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
SF1-207ENST00000413951 FSTL1Q12841 308 aa22.15■■□□□ 1.14
SF1-207ENST00000413951 ZNF652Q9Y2D9 606 aa22.15■■□□□ 1.14
SF1-207ENST00000413951 A1BGP04217 495 aa22.14■■□□□ 1.13
SF1-207ENST00000413951 ST5P78524 1137 aa22.14■■□□□ 1.13
SF1-207ENST00000413951 CLEC4GQ6UXB4 293 aa22.14■■□□□ 1.13
SF1-207ENST00000413951 PNNQ9H307 717 aaKnown RBP22.14■■□□□ 1.13
SF1-207ENST00000413951 SIPA1L3O60292 1781 aaPredicted RBP22.14■■□□□ 1.13
SF1-207ENST00000413951 RGL2O15211 777 aa22.13■■□□□ 1.13
SF1-207ENST00000413951 DZIP3Q86Y13 1208 aaKnown RBP22.13■■□□□ 1.13
SF1-207ENST00000413951 CNBD1Q8NA66 436 aa22.13■■□□□ 1.13
SF1-207ENST00000413951 AFDNP55196 1824 aaKnown RBP22.13■■□□□ 1.13
SF1-207ENST00000413951 ZNF622Q969S3 477 aaKnown RBP eCLIP22.12■■□□□ 1.131e-14■□□□□ 11.1
SF1-207ENST00000413951 MYBBP1AQ9BQG0 1328 aaKnown RBP22.11■■□□□ 1.13
SF1-207ENST00000413951 CAMTA2O94983 1202 aa22.11■■□□□ 1.13
SF1-207ENST00000413951 PRR5LQ6MZQ0 368 aa22.11■■□□□ 1.13
SF1-207ENST00000413951 MCM10Q7L590 875 aa22.11■■□□□ 1.13
SF1-207ENST00000413951 PNISRQ8TF01 805 aaKnown RBP22.11■■□□□ 1.13
SF1-207ENST00000413951 CNKSR1Q969H4 720 aa22.11■■□□□ 1.13
SF1-207ENST00000413951 CEP350Q5VT06 3117 aa22.11■■□□□ 1.13
SF1-207ENST00000413951 KCNQ3O43525 872 aa22.1■■□□□ 1.13
SF1-207ENST00000413951 TAF7Q15545 349 aaPredicted RBP22.1■■□□□ 1.13
SF1-207ENST00000413951 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
SF1-207ENST00000413951 RRAGCQ9HB90 399 aa22.1■■□□□ 1.13
SF1-207ENST00000413951 USP16Q9Y5T5 823 aa22.1■■□□□ 1.13
SF1-207ENST00000413951 RASSF7Q02833 373 aa22.09■■□□□ 1.13
SF1-207ENST00000413951 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
SF1-207ENST00000413951 DLEC1Q9Y238 1755 aa22.09■■□□□ 1.13
SF1-207ENST00000413951 GLTPD2A6NH11 291 aa22.08■■□□□ 1.13
SF1-207ENST00000413951 STYK1Q6J9G0 422 aa22.08■■□□□ 1.13
SF1-207ENST00000413951 DPY19L2Q6NUT2 758 aa22.08■■□□□ 1.13
SF1-207ENST00000413951 VEGFAP15692 232 aaPredicted RBP22.07■■□□□ 1.12
SF1-207ENST00000413951 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms