RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 TICAM2Q86XR7 235 aa16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 FAM177A1Q8N128 213 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 MYD88Q99836 296 aa16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-202ENST00000413806 FLIIQ13045 1269 aa16.01■□□□□ 0.15
SMARCA4-202ENST00000413806 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
SMARCA4-202ENST00000413806 EVI5LQ96CN4 794 aa16.01■□□□□ 0.15
SMARCA4-202ENST00000413806 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-202ENST00000413806 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-202ENST00000413806 BOLA2Q9H3K6 86 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 KDM5BQ9UGL1 1544 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 PIK3R4Q99570 1358 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 IFIT1P09914 478 aaKnown RBP16■□□□□ 0.15
SMARCA4-202ENST00000413806 IDI1Q13907 227 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 TTC22Q5TAA0 569 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 FILIP1Q7Z7B0 1213 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 SKAP1Q86WV1 359 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 F6X3S4 739 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 TANGO6Q9C0B7 1094 aa16■□□□□ 0.15
SMARCA4-202ENST00000413806 CCDC196A0A1B0GTZ2 297 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 PARD3Q8TEW0 1356 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 IGHDP01880 384 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 TNNT1P13805 278 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 PRAG1Q86YV5 1406 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 NUCB1Q02818 461 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 CAMK4Q16566 473 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 FERMT3Q86UX7 667 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 FAM107BQ9H098 131 aa15.99■□□□□ 0.15
SMARCA4-202ENST00000413806 PTPRKQ15262 1439 aa15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 DDX19AQ9NUU7 478 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 POLR3GO15318 223 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 ATP2B2Q01814 1243 aa15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 EPB41L2O43491 1005 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 HMGB2P26583 209 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 CFAP100Q494V2 611 aa15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 ZNF287Q9HBT7 754 aa15.98■□□□□ 0.15
SMARCA4-202ENST00000413806 ZSCAN12O43309 604 aa15.97■□□□□ 0.15
SMARCA4-202ENST00000413806 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
SMARCA4-202ENST00000413806 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMARCA4-202ENST00000413806 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
SMARCA4-202ENST00000413806 ZNF652Q9Y2D9 606 aa15.97■□□□□ 0.15
SMARCA4-202ENST00000413806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.97■□□□□ 0.151e-6■■■■□ 25.1
SMARCA4-202ENST00000413806 GBP3Q9H0R5 595 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 NEMFO60524 1076 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 MCM5P33992 734 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 AMOTL2Q9Y2J4 779 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 CTTNBP2Q8WZ74 1663 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 PTPN14Q15678 1187 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 ENOX2Q16206 610 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 CFAP43Q8NDM7 1665 aa15.96■□□□□ 0.15
SMARCA4-202ENST00000413806 ZHX3Q9H4I2 956 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 USHBP1Q8N6Y0 703 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 CCDC8Q9H0W5 538 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 NEFHP12036 1026 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 IFIT5Q13325 482 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 ARHGAP29Q52LW3 1261 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 ZNF397Q8NF99 534 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 NAPBQ9H115 298 aa15.95■□□□□ 0.14
SMARCA4-202ENST00000413806 CLCN1P35523 988 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 UVSSAQ2YD98 709 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.94■□□□□ 0.141e-6■■■■■ 119.3
SMARCA4-202ENST00000413806 BAG4O95429 457 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 KLHL40Q2TBA0 621 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 CAVIN4Q5BKX8 364 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 PLCH2O75038 1416 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 STX6O43752 255 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 TMEM132AQ24JP5 1023 aa15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 RNF41Q9H4P4 317 aaPredicted RBP15.94■□□□□ 0.14
SMARCA4-202ENST00000413806 MPRIPQ6WCQ1 1025 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 ZNF213O14771 459 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 SLC5A1P13866 664 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 GJB2P29033 226 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 FBXO31Q5XUX0 539 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 KIAA1328Q86T90 577 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 TAX1BP1Q86VP1 789 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 PUS7Q96PZ0 661 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 WWC2Q6AWC2 1192 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 CCDC85AQ96PX6 553 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 GTPBP4Q9BZE4 634 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 CRACR2AQ9BSW2 395 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 CLIP2Q9UDT6 1046 aa15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-202ENST00000413806 CAVIN2O95810 425 aa15.92■□□□□ 0.14
SMARCA4-202ENST00000413806 KIF18AQ8NI77 898 aa15.92■□□□□ 0.14
SMARCA4-202ENST00000413806 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
SMARCA4-202ENST00000413806 ARHGEF12Q9NZN5 1544 aa15.92■□□□□ 0.14
SMARCA4-202ENST00000413806 ABCF2Q9UG63 623 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms