RNA–Protein interactions for RNA: ENST00000413587.5

ERGIC3-205, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 977 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-205ENST00000413587 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
ERGIC3-205ENST00000413587 COL5A3P25940 1745 aaPredicted RBP15.9■□□□□ 0.14
ERGIC3-205ENST00000413587 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
ERGIC3-205ENST00000413587 VIRMAQ69YN4 1812 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 TJP1Q07157 1748 aa15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 E9PSI1 815 aa15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 SLFN5Q08AF3 891 aa15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 INTS5Q6P9B9 1019 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 MCM10Q7L590 875 aa15.89■□□□□ 0.13
ERGIC3-205ENST00000413587 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 MYH14Q7Z406 1995 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 KCNQ3O43525 872 aa15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 NEFMP07197 916 aa15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 WWC1Q8IX03 1113 aa15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
ERGIC3-205ENST00000413587 MMP10P09238 476 aa15.87■□□□□ 0.13
ERGIC3-205ENST00000413587 CYP19A1P11511 503 aaPredicted RBP15.87■□□□□ 0.13
ERGIC3-205ENST00000413587 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
ERGIC3-205ENST00000413587 ZNF496Q96IT1 587 aaPredicted RBP15.87■□□□□ 0.13
ERGIC3-205ENST00000413587 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 TEFQ10587 303 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 FKBP8Q14318 412 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 CDCA7LQ96GN5 454 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
ERGIC3-205ENST00000413587 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
ERGIC3-205ENST00000413587 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
ERGIC3-205ENST00000413587 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
ERGIC3-205ENST00000413587 RCAN3Q9UKA8 241 aa15.85■□□□□ 0.13
ERGIC3-205ENST00000413587 TMPOP42166 694 aaKnown RBP15.84■□□□□ 0.13
ERGIC3-205ENST00000413587 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
ERGIC3-205ENST00000413587 ZNF526Q8TF50 670 aaPredicted RBP15.84■□□□□ 0.13
ERGIC3-205ENST00000413587 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
ERGIC3-205ENST00000413587 IL16Q14005 1332 aa15.84■□□□□ 0.13
ERGIC3-205ENST00000413587 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
ERGIC3-205ENST00000413587 HEG1Q9ULI3 1381 aa15.83■□□□□ 0.12
ERGIC3-205ENST00000413587 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
ERGIC3-205ENST00000413587 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
ERGIC3-205ENST00000413587 GYS1P13807 737 aa15.82■□□□□ 0.12
ERGIC3-205ENST00000413587 ADRA2BP18089 450 aa15.82■□□□□ 0.12
ERGIC3-205ENST00000413587 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
ERGIC3-205ENST00000413587 THUMPD2Q9BTF0 503 aaKnown RBP15.82■□□□□ 0.12
ERGIC3-205ENST00000413587 CCDC87Q9NVE4 849 aa15.82■□□□□ 0.12
ERGIC3-205ENST00000413587 SOS1Q07889 1333 aaPredicted RBP15.81■□□□□ 0.12
ERGIC3-205ENST00000413587 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
ERGIC3-205ENST00000413587 ZBTB1Q9Y2K1 713 aa15.81■□□□□ 0.12
ERGIC3-205ENST00000413587 A0A0G2JLW4 131 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 PRAMEF22A3QJZ6 481 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 KIF3CO14782 793 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 CT47B1P0C2W7 299 aaPredicted RBP15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 TGFB2P61812 414 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 CALD1Q05682 793 aaKnown RBP15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 TAF7Q15545 349 aaPredicted RBP15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 MIS18AQ9NYP9 233 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
ERGIC3-205ENST00000413587 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
ERGIC3-205ENST00000413587 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
ERGIC3-205ENST00000413587 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
ERGIC3-205ENST00000413587 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
ERGIC3-205ENST00000413587 DPEP1P16444 411 aa15.78■□□□□ 0.12
ERGIC3-205ENST00000413587 RFC4P35249 363 aa15.78■□□□□ 0.12
ERGIC3-205ENST00000413587 RIPK4P57078 832 aa15.78■□□□□ 0.12
ERGIC3-205ENST00000413587 HSPA6P17066 643 aa15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 KCNA3P22001 575 aa15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 EIF5P55010 431 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 TRIM35Q9UPQ4 493 aa15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 BCS1LQ9Y276 419 aa15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 RRP7AQ9Y3A4 280 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-205ENST00000413587 A1BGP04217 495 aa15.76■□□□□ 0.11
ERGIC3-205ENST00000413587 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
ERGIC3-205ENST00000413587 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
ERGIC3-205ENST00000413587 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.76■□□□□ 0.11
ERGIC3-205ENST00000413587 TEX13AQ9BXU3 409 aaPredicted RBP15.76■□□□□ 0.11
ERGIC3-205ENST00000413587 STARD3NLO95772 234 aa15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 TM4SF1P30408 202 aa15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 DDR1Q08345 913 aa15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 COL15A1P39059 1388 aa15.75■□□□□ 0.11
ERGIC3-205ENST00000413587 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
ERGIC3-205ENST00000413587 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
ERGIC3-205ENST00000413587 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
ERGIC3-205ENST00000413587 NARFQ9UHQ1 456 aa15.74■□□□□ 0.11
ERGIC3-205ENST00000413587 PARP3Q9Y6F1 533 aa15.74■□□□□ 0.11
ERGIC3-205ENST00000413587 NBPF26B4DH59 902 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms