RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 GNAT3A8MTJ3 354 aa25.86■■□□□ 1.73
CPSF7-204ENST00000413232 ZPR1O75312 459 aa25.86■■□□□ 1.73
CPSF7-204ENST00000413232 VSIG10Q8N0Z9 540 aa25.86■■□□□ 1.73
CPSF7-204ENST00000413232 BCL2L12Q9HB09 334 aa25.86■■□□□ 1.73
CPSF7-204ENST00000413232 COL15A1P39059 1388 aa25.85■■□□□ 1.73
CPSF7-204ENST00000413232 FCHSD2O94868 740 aa25.85■■□□□ 1.73
CPSF7-204ENST00000413232 GAS2L2Q8NHY3 880 aa25.85■■□□□ 1.73
CPSF7-204ENST00000413232 ZNF496Q96IT1 587 aaPredicted RBP25.85■■□□□ 1.73
CPSF7-204ENST00000413232 RSPH6AQ9H0K4 717 aa25.85■■□□□ 1.73
CPSF7-204ENST00000413232 NARFQ9UHQ1 456 aa25.85■■□□□ 1.73
CPSF7-204ENST00000413232 CHRNA5P30532 468 aa25.84■■□□□ 1.73
CPSF7-204ENST00000413232 ARHGAP27Q6ZUM4 889 aa25.84■■□□□ 1.73
CPSF7-204ENST00000413232 NRXN2Q9P2S2 1712 aa25.83■■□□□ 1.73
CPSF7-204ENST00000413232 CANXP27824 592 aaKnown RBP25.83■■□□□ 1.73
CPSF7-204ENST00000413232 PPP2R1AP30153 589 aa25.83■■□□□ 1.73
CPSF7-204ENST00000413232 PRKAR2BP31323 418 aa25.83■■□□□ 1.73
CPSF7-204ENST00000413232 NFIXQ14938 502 aa25.83■■□□□ 1.73
CPSF7-204ENST00000413232 ZNF790Q6PG37 636 aa25.82■■□□□ 1.72
CPSF7-204ENST00000413232 KCNQ3O43525 872 aa25.81■■□□□ 1.72
CPSF7-204ENST00000413232 TEFQ10587 303 aa25.81■■□□□ 1.72
CPSF7-204ENST00000413232 TTC5Q8N0Z6 440 aa25.81■■□□□ 1.72
CPSF7-204ENST00000413232 PIM2Q9P1W9 311 aa25.81■■□□□ 1.72
CPSF7-204ENST00000413232 SBF1O95248 1867 aa25.81■■□□□ 1.72
CPSF7-204ENST00000413232 CEMIPQ8WUJ3 1361 aa25.81■■□□□ 1.72
CPSF7-204ENST00000413232 EIF5P55010 431 aaKnown RBP25.8■■□□□ 1.72
CPSF7-204ENST00000413232 HEG1Q9ULI3 1381 aa25.8■■□□□ 1.72
CPSF7-204ENST00000413232 KIF3CO14782 793 aa25.79■■□□□ 1.72
CPSF7-204ENST00000413232 CFAP53Q96M91 514 aa25.79■■□□□ 1.72
CPSF7-204ENST00000413232 STARD3NLO95772 234 aa25.77■■□□□ 1.72
CPSF7-204ENST00000413232 DALRD3Q5D0E6 543 aaKnown RBP25.76■■□□□ 1.71
CPSF7-204ENST00000413232 SERPINB2P05120 415 aa25.75■■□□□ 1.71
CPSF7-204ENST00000413232 U2AF1L5P0DN76 240 aaPredicted RBP25.75■■□□□ 1.71
CPSF7-204ENST00000413232 U2AF1Q01081 240 aaKnown RBP eCLIP25.75■■□□□ 1.71
CPSF7-204ENST00000413232 DLEC1Q9Y238 1755 aa25.74■■□□□ 1.71
CPSF7-204ENST00000413232 A1BGP04217 495 aa25.74■■□□□ 1.71
CPSF7-204ENST00000413232 ANKRD31Q8N7Z5 1873 aa25.74■■□□□ 1.71
CPSF7-204ENST00000413232 CARMIL3Q8ND23 1372 aa25.73■■□□□ 1.71
CPSF7-204ENST00000413232 C9orf131Q5VYM1 1079 aa25.73■■□□□ 1.71
CPSF7-204ENST00000413232 BICDL1Q6ZP65 573 aa25.73■■□□□ 1.71
CPSF7-204ENST00000413232 NUDCQ9Y266 331 aa25.73■■□□□ 1.71
CPSF7-204ENST00000413232 SCN7AQ01118 1682 aa25.72■■□□□ 1.71
CPSF7-204ENST00000413232 BTBD11A6QL63 1104 aa25.72■■□□□ 1.71
CPSF7-204ENST00000413232 MCM10Q7L590 875 aa25.72■■□□□ 1.71
CPSF7-204ENST00000413232 FMNL2Q96PY5 1086 aa25.72■■□□□ 1.71
CPSF7-204ENST00000413232 TBC1D2BQ9UPU7 963 aa25.72■■□□□ 1.71
CPSF7-204ENST00000413232 CCDC88AQ3V6T2 1871 aa25.71■■□□□ 1.71
CPSF7-204ENST00000413232 PRAMEF22A3QJZ6 481 aa25.71■■□□□ 1.71
CPSF7-204ENST00000413232 DCTN1Q14203 1278 aa25.71■■□□□ 1.71
CPSF7-204ENST00000413232 TBC1D9BQ66K14 1250 aa25.71■■□□□ 1.71
CPSF7-204ENST00000413232 TEX13AQ9BXU3 409 aaPredicted RBP25.71■■□□□ 1.71
CPSF7-204ENST00000413232 DLG5Q8TDM6 1919 aa25.71■■□□□ 1.71
CPSF7-204ENST00000413232 ZNF330Q9Y3S2 320 aaPredicted RBP25.7■■□□□ 1.7
CPSF7-204ENST00000413232 USP16Q9Y5T5 823 aa25.7■■□□□ 1.7
CPSF7-204ENST00000413232 NMRK2Q9NPI5 230 aa25.69■■□□□ 1.7
CPSF7-204ENST00000413232 A0A087WZG4 1122 aa25.68■■□□□ 1.7
CPSF7-204ENST00000413232 IL6STP40189 918 aaPredicted RBP25.68■■□□□ 1.7
CPSF7-204ENST00000413232 PIP4K2AP48426 406 aaPredicted RBP25.68■■□□□ 1.7
CPSF7-204ENST00000413232 HSPA6P17066 643 aa25.67■■□□□ 1.7
CPSF7-204ENST00000413232 CCDC24Q8N4L8 307 aa25.67■■□□□ 1.7
CPSF7-204ENST00000413232 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
CPSF7-204ENST00000413232 CAMTA2O94983 1202 aa25.65■■□□□ 1.7
CPSF7-204ENST00000413232 PRELPP51888 382 aa25.65■■□□□ 1.7
CPSF7-204ENST00000413232 RASSF7Q02833 373 aa25.65■■□□□ 1.7
CPSF7-204ENST00000413232 C2CD5Q86YS7 1000 aa25.65■■□□□ 1.7
CPSF7-204ENST00000413232 RNF181Q9P0P0 153 aa25.65■■□□□ 1.7
CPSF7-204ENST00000413232 COL11A2P13942 1736 aaPredicted RBP25.64■■□□□ 1.7
CPSF7-204ENST00000413232 RTF1Q92541 710 aaKnown RBP25.64■■□□□ 1.7
CPSF7-204ENST00000413232 PRR5LQ6MZQ0 368 aa25.62■■□□□ 1.69
CPSF7-204ENST00000413232 TTLL6Q8N841 843 aa25.61■■□□□ 1.69
CPSF7-204ENST00000413232 MIS18AQ9NYP9 233 aa25.61■■□□□ 1.69
CPSF7-204ENST00000413232 CACNA1SQ13698 1873 aa25.6■■□□□ 1.69
CPSF7-204ENST00000413232 H0YIN7 160 aa25.6■■□□□ 1.69
CPSF7-204ENST00000413232 HTATSF1O43719 755 aaKnown RBP25.6■■□□□ 1.69
CPSF7-204ENST00000413232 TOMM70O94826 608 aa25.6■■□□□ 1.69
CPSF7-204ENST00000413232 DZIP3Q86Y13 1208 aaKnown RBP25.6■■□□□ 1.69
CPSF7-204ENST00000413232 NBPF26B4DH59 902 aa25.59■■□□□ 1.69
CPSF7-204ENST00000413232 SNRPA1P09661 255 aaKnown RBP25.59■■□□□ 1.69
CPSF7-204ENST00000413232 NBPF10Q6P3W6 841 aaKnown RBP25.59■■□□□ 1.69
CPSF7-204ENST00000413232 NBPF15Q8N660 670 aa25.59■■□□□ 1.69
CPSF7-204ENST00000413232 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
CPSF7-204ENST00000413232 BRIP1Q9BX63 1249 aa25.58■■□□□ 1.69
CPSF7-204ENST00000413232 TAF7Q15545 349 aaPredicted RBP25.57■■□□□ 1.68
CPSF7-204ENST00000413232 SETDB2Q96T68 719 aa25.57■■□□□ 1.68
CPSF7-204ENST00000413232 SLX4Q8IY92 1834 aa25.57■■□□□ 1.68
CPSF7-204ENST00000413232 FER1L6Q2WGJ9 1857 aa25.57■■□□□ 1.68
CPSF7-204ENST00000413232 NFKBIEO00221 500 aa25.56■■□□□ 1.68
CPSF7-204ENST00000413232 KDM3BQ7LBC6 1761 aa25.56■■□□□ 1.68
CPSF7-204ENST00000413232 NPM2Q86SE8 214 aaKnown RBP25.55■■□□□ 1.68
CPSF7-204ENST00000413232 ZNF622Q969S3 477 aaKnown RBP eCLIP25.55■■□□□ 1.682e-6■□□□□ 9.3
CPSF7-204ENST00000413232 RRAGCQ9HB90 399 aa25.55■■□□□ 1.68
CPSF7-204ENST00000413232 PDE6BP35913 854 aa25.54■■□□□ 1.68
CPSF7-204ENST00000413232 THUMPD2Q9BTF0 503 aaKnown RBP25.54■■□□□ 1.68
CPSF7-204ENST00000413232 TNRC6CQ9HCJ0 1690 aaKnown RBP25.54■■□□□ 1.68
CPSF7-204ENST00000413232 LAMB4A4D0S4 1761 aa25.54■■□□□ 1.68
CPSF7-204ENST00000413232 DICER1Q9UPY3 1922 aaKnown RBP25.53■■□□□ 1.68
CPSF7-204ENST00000413232 LMNB1P20700 586 aa25.53■■□□□ 1.68
CPSF7-204ENST00000413232 CNBD1Q8NA66 436 aa25.53■■□□□ 1.68
CPSF7-204ENST00000413232 ZNF219Q9P2Y4 722 aaPredicted RBP25.53■■□□□ 1.68
CPSF7-204ENST00000413232 TIAM2Q8IVF5 1701 aa25.53■■□□□ 1.68
CPSF7-204ENST00000413232 KDM2BQ8NHM5 1336 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms