RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 DDB1Q16531 1140 aa12.24□□□□□ -0.45
VSIG4-202ENST00000412866 FNBP4Q8N3X1 1017 aaPredicted RBP12.24□□□□□ -0.45
VSIG4-202ENST00000412866 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
VSIG4-202ENST00000412866 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
VSIG4-202ENST00000412866 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
VSIG4-202ENST00000412866 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
VSIG4-202ENST00000412866 ANXA1P04083 346 aa12.23□□□□□ -0.45
VSIG4-202ENST00000412866 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
VSIG4-202ENST00000412866 MEIS3Q99687 375 aa12.22□□□□□ -0.45
VSIG4-202ENST00000412866 ATP10DQ9P241 1426 aa12.22□□□□□ -0.45
VSIG4-202ENST00000412866 ADCY9O60503 1353 aa12.22□□□□□ -0.45
VSIG4-202ENST00000412866 PDIA6Q15084 440 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 MEX3CQ5U5Q3 659 aaKnown RBP12.21□□□□□ -0.45
VSIG4-202ENST00000412866 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 FBXO41Q8TF61 875 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 PIGBQ92521 554 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 BCL9O00512 1426 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 ITGB4P16144 1822 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 ERBB4Q15303 1308 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 DOT1LQ8TEK3 1739 aa12.21□□□□□ -0.45
VSIG4-202ENST00000412866 DDX58O95786 925 aaKnown RBP12.21□□□□□ -0.46
VSIG4-202ENST00000412866 DNAAF4Q8WXU2 420 aa12.21□□□□□ -0.46
VSIG4-202ENST00000412866 USP21Q9UK80 565 aa12.21□□□□□ -0.46
VSIG4-202ENST00000412866 USP16Q9Y5T5 823 aa12.21□□□□□ -0.46
VSIG4-202ENST00000412866 PI4KAP2A4QPH2 592 aa12.2□□□□□ -0.46
VSIG4-202ENST00000412866 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
VSIG4-202ENST00000412866 GNAI3P08754 354 aa12.2□□□□□ -0.46
VSIG4-202ENST00000412866 KSR2Q6VAB6 950 aa12.2□□□□□ -0.46
VSIG4-202ENST00000412866 SMC5Q8IY18 1101 aa12.2□□□□□ -0.46
VSIG4-202ENST00000412866 PI4KAP1Q8N8J0 262 aa12.2□□□□□ -0.46
VSIG4-202ENST00000412866 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
VSIG4-202ENST00000412866 MYL6BP14649 208 aa12.19□□□□□ -0.46
VSIG4-202ENST00000412866 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
VSIG4-202ENST00000412866 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
VSIG4-202ENST00000412866 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
VSIG4-202ENST00000412866 ATG3Q9NT62 314 aa12.19□□□□□ -0.46
VSIG4-202ENST00000412866 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
VSIG4-202ENST00000412866 PDZRN3Q9UPQ7 1066 aa12.19□□□□□ -0.46
VSIG4-202ENST00000412866 GNAI2P04899 355 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 RGS3P49796 1198 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 LRP10Q7Z4F1 713 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 SIRT2Q8IXJ6 389 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 RPAP2Q8IXW5 612 aaPredicted RBP12.18□□□□□ -0.46
VSIG4-202ENST00000412866 VSIG10Q8N0Z9 540 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 XAGE3Q8WTP9 111 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
VSIG4-202ENST00000412866 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
VSIG4-202ENST00000412866 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
VSIG4-202ENST00000412866 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
VSIG4-202ENST00000412866 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
VSIG4-202ENST00000412866 GCC1Q96CN9 775 aa12.17□□□□□ -0.46
VSIG4-202ENST00000412866 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
VSIG4-202ENST00000412866 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
VSIG4-202ENST00000412866 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
VSIG4-202ENST00000412866 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
VSIG4-202ENST00000412866 AFF2P51816 1311 aa12.16□□□□□ -0.46
VSIG4-202ENST00000412866 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 HMMRO75330 724 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
VSIG4-202ENST00000412866 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
VSIG4-202ENST00000412866 NUCB1Q02818 461 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 NBPF10Q6P3W6 841 aaKnown RBP12.15□□□□□ -0.46
VSIG4-202ENST00000412866 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 IBTKQ9P2D0 1353 aaPredicted RBP12.15□□□□□ -0.46
VSIG4-202ENST00000412866 ATRNO75882 1429 aa12.15□□□□□ -0.46
VSIG4-202ENST00000412866 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
VSIG4-202ENST00000412866 A0A0G2JS52 829 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 STARD3NLO95772 234 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 A1BGP04217 495 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 MYT1Q01538 1121 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 NEXNQ0ZGT2 675 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
VSIG4-202ENST00000412866 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
VSIG4-202ENST00000412866 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
VSIG4-202ENST00000412866 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
VSIG4-202ENST00000412866 PLBD2Q8NHP8 589 aa12.13□□□□□ -0.47
VSIG4-202ENST00000412866 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
VSIG4-202ENST00000412866 TRPC5Q9UL62 973 aaPredicted RBP12.13□□□□□ -0.47
VSIG4-202ENST00000412866 TJP1Q07157 1748 aa12.13□□□□□ -0.47
VSIG4-202ENST00000412866 ARFGEF2Q9Y6D5 1785 aa12.13□□□□□ -0.47
VSIG4-202ENST00000412866 CWF19L2Q2TBE0 894 aaKnown RBP12.12□□□□□ -0.47
VSIG4-202ENST00000412866 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
VSIG4-202ENST00000412866 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
VSIG4-202ENST00000412866 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 GRM8O00222 908 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
VSIG4-202ENST00000412866 PDE4AP27815 886 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 SLC4A9Q96Q91 983 aa12.11□□□□□ -0.47
VSIG4-202ENST00000412866 MYD88Q99836 296 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms