RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 RRAGCQ9HB90 399 aa17.71■□□□□ 0.43
PTPRN-203ENST00000412847 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
PTPRN-203ENST00000412847 ZC3H4Q9UPT8 1303 aaKnown RBP17.71■□□□□ 0.42
PTPRN-203ENST00000412847 TM4SF1P30408 202 aa17.7■□□□□ 0.42
PTPRN-203ENST00000412847 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
PTPRN-203ENST00000412847 PANK3Q9H999 370 aa17.7■□□□□ 0.42
PTPRN-203ENST00000412847 SOS1Q07889 1333 aaPredicted RBP17.7■□□□□ 0.42
PTPRN-203ENST00000412847 COL15A1P39059 1388 aa17.69■□□□□ 0.42
PTPRN-203ENST00000412847 ZPR1O75312 459 aa17.69■□□□□ 0.42
PTPRN-203ENST00000412847 RASSF7Q02833 373 aa17.69■□□□□ 0.42
PTPRN-203ENST00000412847 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
PTPRN-203ENST00000412847 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
PTPRN-203ENST00000412847 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
PTPRN-203ENST00000412847 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
PTPRN-203ENST00000412847 AKAP4Q5JQC9 854 aa17.67■□□□□ 0.42
PTPRN-203ENST00000412847 COL13A1Q5TAT6 717 aaPredicted RBP17.66■□□□□ 0.42
PTPRN-203ENST00000412847 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
PTPRN-203ENST00000412847 IL13P35225 146 aa17.65■□□□□ 0.42
PTPRN-203ENST00000412847 NFIXQ14938 502 aa17.65■□□□□ 0.42
PTPRN-203ENST00000412847 NARFQ9UHQ1 456 aa17.65■□□□□ 0.42
PTPRN-203ENST00000412847 CYP19A1P11511 503 aaPredicted RBP17.64■□□□□ 0.41
PTPRN-203ENST00000412847 LMNB1P20700 586 aa17.64■□□□□ 0.41
PTPRN-203ENST00000412847 TRIM26Q12899 539 aaPredicted RBP17.64■□□□□ 0.41
PTPRN-203ENST00000412847 CARMIL3Q8ND23 1372 aa17.64■□□□□ 0.41
PTPRN-203ENST00000412847 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRN-203ENST00000412847 ZBTB1Q9Y2K1 713 aa17.63■□□□□ 0.41
PTPRN-203ENST00000412847 GLTPD2A6NH11 291 aa17.62■□□□□ 0.41
PTPRN-203ENST00000412847 SERPINB2P05120 415 aa17.62■□□□□ 0.41
PTPRN-203ENST00000412847 HSPA5P11021 654 aaKnown RBP17.62■□□□□ 0.41
PTPRN-203ENST00000412847 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
PTPRN-203ENST00000412847 LGR6Q9HBX8 967 aa17.62■□□□□ 0.41
PTPRN-203ENST00000412847 SLX4Q8IY92 1834 aa17.61■□□□□ 0.41
PTPRN-203ENST00000412847 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
PTPRN-203ENST00000412847 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
PTPRN-203ENST00000412847 PRELPP51888 382 aa17.61■□□□□ 0.41
PTPRN-203ENST00000412847 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
PTPRN-203ENST00000412847 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
PTPRN-203ENST00000412847 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
PTPRN-203ENST00000412847 CAPN15O75808 1086 aa17.6■□□□□ 0.41
PTPRN-203ENST00000412847 TNS4Q8IZW8 715 aa17.6■□□□□ 0.41
PTPRN-203ENST00000412847 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
PTPRN-203ENST00000412847 SCN4AP35499 1836 aa17.6■□□□□ 0.41
PTPRN-203ENST00000412847 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
PTPRN-203ENST00000412847 KNSTRNQ9Y448 316 aa17.59■□□□□ 0.41
PTPRN-203ENST00000412847 H0YIN7 160 aa17.58■□□□□ 0.4
PTPRN-203ENST00000412847 NFKBIEO00221 500 aa17.58■□□□□ 0.4
PTPRN-203ENST00000412847 HMOX1P09601 288 aa17.58■□□□□ 0.4
PTPRN-203ENST00000412847 HSPA1AP0DMV8 641 aaKnown RBP17.57■□□□□ 0.4
PTPRN-203ENST00000412847 HSPA1BP0DMV9 641 aaKnown RBP17.57■□□□□ 0.4
PTPRN-203ENST00000412847 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
PTPRN-203ENST00000412847 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
PTPRN-203ENST00000412847 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
PTPRN-203ENST00000412847 A0A087WZG4 1122 aa17.54■□□□□ 0.4
PTPRN-203ENST00000412847 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
PTPRN-203ENST00000412847 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
PTPRN-203ENST00000412847 POTECB2RU33 542 aa17.53■□□□□ 0.4
PTPRN-203ENST00000412847 STARD3NLO95772 234 aa17.53■□□□□ 0.4
PTPRN-203ENST00000412847 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
PTPRN-203ENST00000412847 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
PTPRN-203ENST00000412847 DPY19L2Q6NUT2 758 aa17.53■□□□□ 0.4
PTPRN-203ENST00000412847 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPRN-203ENST00000412847 PDE6BP35913 854 aa17.52■□□□□ 0.4
PTPRN-203ENST00000412847 TBC1D9BQ66K14 1250 aa17.52■□□□□ 0.4
PTPRN-203ENST00000412847 HEG1Q9ULI3 1381 aa17.52■□□□□ 0.39
PTPRN-203ENST00000412847 COL3A1P02461 1466 aaPredicted RBP17.51■□□□□ 0.39
PTPRN-203ENST00000412847 C21orf2O43822 256 aa17.51■□□□□ 0.39
PTPRN-203ENST00000412847 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
PTPRN-203ENST00000412847 BRIP1Q9BX63 1249 aa17.51■□□□□ 0.39
PTPRN-203ENST00000412847 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
PTPRN-203ENST00000412847 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
PTPRN-203ENST00000412847 LTBP3Q9NS15 1303 aa17.5■□□□□ 0.39
PTPRN-203ENST00000412847 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
PTPRN-203ENST00000412847 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
PTPRN-203ENST00000412847 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
PTPRN-203ENST00000412847 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
PTPRN-203ENST00000412847 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
PTPRN-203ENST00000412847 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
PTPRN-203ENST00000412847 PCNTO95613 3336 aa17.48■□□□□ 0.39
PTPRN-203ENST00000412847 TEFQ10587 303 aa17.48■□□□□ 0.39
PTPRN-203ENST00000412847 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
PTPRN-203ENST00000412847 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
PTPRN-203ENST00000412847 ZNF496Q96IT1 587 aaPredicted RBP17.48■□□□□ 0.39
PTPRN-203ENST00000412847 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
PTPRN-203ENST00000412847 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
PTPRN-203ENST00000412847 IL6STP40189 918 aaPredicted RBP17.47■□□□□ 0.39
PTPRN-203ENST00000412847 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
PTPRN-203ENST00000412847 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
PTPRN-203ENST00000412847 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
PTPRN-203ENST00000412847 NPHP1O15259 732 aa17.46■□□□□ 0.39
PTPRN-203ENST00000412847 CNKSR1Q969H4 720 aa17.46■□□□□ 0.39
PTPRN-203ENST00000412847 NUP98P52948 1817 aa17.46■□□□□ 0.39
PTPRN-203ENST00000412847 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
PTPRN-203ENST00000412847 ST5P78524 1137 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
PTPRN-203ENST00000412847 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
PTPRN-203ENST00000412847 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 MKRN1Q9UHC7 482 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms