RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 BCL2L12Q9HB09 334 aa16.55■□□□□ 0.24
PHBP3-201ENST00000412562 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
PHBP3-201ENST00000412562 ZPR1O75312 459 aa16.54■□□□□ 0.24
PHBP3-201ENST00000412562 U2AF1L5P0DN76 240 aaPredicted RBP16.54■□□□□ 0.24
PHBP3-201ENST00000412562 CHRNA5P30532 468 aa16.54■□□□□ 0.24
PHBP3-201ENST00000412562 U2AF1Q01081 240 aaKnown RBP eCLIP16.54■□□□□ 0.24
PHBP3-201ENST00000412562 TEFQ10587 303 aa16.54■□□□□ 0.24
PHBP3-201ENST00000412562 CFAP53Q96M91 514 aa16.54■□□□□ 0.24
PHBP3-201ENST00000412562 COL15A1P39059 1388 aa16.53■□□□□ 0.24
PHBP3-201ENST00000412562 NFIXQ14938 502 aa16.53■□□□□ 0.24
PHBP3-201ENST00000412562 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
PHBP3-201ENST00000412562 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
PHBP3-201ENST00000412562 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
PHBP3-201ENST00000412562 NARFQ9UHQ1 456 aa16.53■□□□□ 0.24
PHBP3-201ENST00000412562 FCHSD2O94868 740 aa16.52■□□□□ 0.24
PHBP3-201ENST00000412562 ARHGAP27Q6ZUM4 889 aa16.52■□□□□ 0.24
PHBP3-201ENST00000412562 MCM10Q7L590 875 aa16.52■□□□□ 0.24
PHBP3-201ENST00000412562 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
PHBP3-201ENST00000412562 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
PHBP3-201ENST00000412562 DCTN1Q14203 1278 aa16.51■□□□□ 0.23
PHBP3-201ENST00000412562 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
PHBP3-201ENST00000412562 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
PHBP3-201ENST00000412562 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
PHBP3-201ENST00000412562 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
PHBP3-201ENST00000412562 PRAMEF22A3QJZ6 481 aa16.49■□□□□ 0.23
PHBP3-201ENST00000412562 STARD3NLO95772 234 aa16.49■□□□□ 0.23
PHBP3-201ENST00000412562 A1BGP04217 495 aa16.49■□□□□ 0.23
PHBP3-201ENST00000412562 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
PHBP3-201ENST00000412562 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
PHBP3-201ENST00000412562 PIM2Q9P1W9 311 aa16.49■□□□□ 0.23
PHBP3-201ENST00000412562 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
PHBP3-201ENST00000412562 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
PHBP3-201ENST00000412562 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
PHBP3-201ENST00000412562 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
PHBP3-201ENST00000412562 SERPINB2P05120 415 aa16.47■□□□□ 0.23
PHBP3-201ENST00000412562 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
PHBP3-201ENST00000412562 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
PHBP3-201ENST00000412562 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
PHBP3-201ENST00000412562 CARMIL3Q8ND23 1372 aa16.47■□□□□ 0.23
PHBP3-201ENST00000412562 CEP350Q5VT06 3117 aa16.47■□□□□ 0.23
PHBP3-201ENST00000412562 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
PHBP3-201ENST00000412562 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
PHBP3-201ENST00000412562 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
PHBP3-201ENST00000412562 KIF3CO14782 793 aa16.45■□□□□ 0.22
PHBP3-201ENST00000412562 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
PHBP3-201ENST00000412562 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
PHBP3-201ENST00000412562 C9orf131Q5VYM1 1079 aa16.44■□□□□ 0.22
PHBP3-201ENST00000412562 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
PHBP3-201ENST00000412562 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
PHBP3-201ENST00000412562 A0A087WZG4 1122 aa16.43■□□□□ 0.22
PHBP3-201ENST00000412562 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
PHBP3-201ENST00000412562 IL6STP40189 918 aaPredicted RBP16.42■□□□□ 0.22
PHBP3-201ENST00000412562 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
PHBP3-201ENST00000412562 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
PHBP3-201ENST00000412562 PLEKHF1Q96S99 279 aa16.41■□□□□ 0.22
PHBP3-201ENST00000412562 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
PHBP3-201ENST00000412562 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
PHBP3-201ENST00000412562 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
PHBP3-201ENST00000412562 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
PHBP3-201ENST00000412562 PRELPP51888 382 aa16.4■□□□□ 0.22
PHBP3-201ENST00000412562 RASSF7Q02833 373 aa16.4■□□□□ 0.22
PHBP3-201ENST00000412562 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
PHBP3-201ENST00000412562 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
PHBP3-201ENST00000412562 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
PHBP3-201ENST00000412562 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
PHBP3-201ENST00000412562 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
PHBP3-201ENST00000412562 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
PHBP3-201ENST00000412562 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
PHBP3-201ENST00000412562 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
PHBP3-201ENST00000412562 H0YIN7 160 aa16.37■□□□□ 0.21
PHBP3-201ENST00000412562 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
PHBP3-201ENST00000412562 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
PHBP3-201ENST00000412562 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
PHBP3-201ENST00000412562 ZNF622Q969S3 477 aaKnown RBP eCLIP16.36■□□□□ 0.21
PHBP3-201ENST00000412562 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
PHBP3-201ENST00000412562 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
PHBP3-201ENST00000412562 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
PHBP3-201ENST00000412562 HSPA6P17066 643 aa16.35■□□□□ 0.21
PHBP3-201ENST00000412562 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
PHBP3-201ENST00000412562 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
PHBP3-201ENST00000412562 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
PHBP3-201ENST00000412562 NFKBIEO00221 500 aa16.34■□□□□ 0.21
PHBP3-201ENST00000412562 SBF1O95248 1867 aa16.33■□□□□ 0.21
PHBP3-201ENST00000412562 C21orf2O43822 256 aa16.33■□□□□ 0.2
PHBP3-201ENST00000412562 HLFQ16534 295 aa16.33■□□□□ 0.2
PHBP3-201ENST00000412562 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
PHBP3-201ENST00000412562 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
PHBP3-201ENST00000412562 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.2
PHBP3-201ENST00000412562 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.2
PHBP3-201ENST00000412562 FAM177BA6PVY3 158 aa16.32■□□□□ 0.2
PHBP3-201ENST00000412562 PDE6BP35913 854 aa16.32■□□□□ 0.2
PHBP3-201ENST00000412562 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
PHBP3-201ENST00000412562 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
PHBP3-201ENST00000412562 COL11A2P13942 1736 aaPredicted RBP16.31■□□□□ 0.2
PHBP3-201ENST00000412562 TOMM70O94826 608 aa16.31■□□□□ 0.2
PHBP3-201ENST00000412562 NEFMP07197 916 aa16.31■□□□□ 0.2
PHBP3-201ENST00000412562 BCORQ6W2J9 1755 aa16.31■□□□□ 0.2
PHBP3-201ENST00000412562 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
PHBP3-201ENST00000412562 NPHP1O15259 732 aa16.3■□□□□ 0.2
PHBP3-201ENST00000412562 SRGNP10124 158 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms