RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
LINC00342-201ENST00000412393 MYO5CQ9NQX4 1742 aa8.44□□□□□ -1.06
LINC00342-201ENST00000412393 SKIV2LQ15477 1246 aaKnown RBP8.44□□□□□ -1.06
LINC00342-201ENST00000412393 PHF24Q9UPV7 400 aa8.44□□□□□ -1.06
LINC00342-201ENST00000412393 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
LINC00342-201ENST00000412393 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
LINC00342-201ENST00000412393 RICTORQ6R327 1708 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 KRBA1A5PL33 1030 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 SPATA31C2B4DYI2 1134 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 RAPGEF3O95398 923 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 SLC27A3Q5K4L6 730 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 NUCKS1Q9H1E3 243 aaKnown RBP8.43□□□□□ -1.06
LINC00342-201ENST00000412393 CYLDQ9NQC7 956 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 AKNAQ7Z591 1439 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 FANCAO15360 1455 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 FRMPD1Q5SYB0 1578 aa8.43□□□□□ -1.06
LINC00342-201ENST00000412393 MEN1O00255 615 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 F11P03951 625 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
LINC00342-201ENST00000412393 NBPF15Q8N660 670 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 GAS2L1Q99501 681 aaPredicted RBP8.42□□□□□ -1.06
LINC00342-201ENST00000412393 CLIP1P30622 1438 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 CASKIN1Q8WXD9 1431 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 DENND4BO75064 1496 aaPredicted RBP8.42□□□□□ -1.06
LINC00342-201ENST00000412393 KIF14Q15058 1648 aa8.42□□□□□ -1.06
LINC00342-201ENST00000412393 CCDC18Q5T9S5 1454 aa8.41□□□□□ -1.06
LINC00342-201ENST00000412393 TROQ12816 1431 aaPredicted RBP8.41□□□□□ -1.06
LINC00342-201ENST00000412393 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
LINC00342-201ENST00000412393 CLN3Q13286 438 aa8.41□□□□□ -1.06
LINC00342-201ENST00000412393 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
LINC00342-201ENST00000412393 PSMG3-AS1Q96PY0 264 aa8.41□□□□□ -1.06
LINC00342-201ENST00000412393 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
LINC00342-201ENST00000412393 PLCH2O75038 1416 aa8.4□□□□□ -1.06
LINC00342-201ENST00000412393 SNRPNP63162 240 aaKnown RBP8.4□□□□□ -1.06
LINC00342-201ENST00000412393 POU4F2Q12837 409 aa8.4□□□□□ -1.06
LINC00342-201ENST00000412393 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
LINC00342-201ENST00000412393 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
LINC00342-201ENST00000412393 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
LINC00342-201ENST00000412393 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00342-201ENST00000412393 FYCO1Q9BQS8 1478 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 TAS1R3Q7RTX0 852 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 CYP2U1Q7Z449 544 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 CDC42BPBQ9Y5S2 1711 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 ZMYM4Q5VZL5 1548 aa8.39□□□□□ -1.07
LINC00342-201ENST00000412393 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
LINC00342-201ENST00000412393 EFCAB2Q5VUJ9 269 aa8.38□□□□□ -1.07
LINC00342-201ENST00000412393 ARHGAP5Q13017 1502 aa8.38□□□□□ -1.07
LINC00342-201ENST00000412393 ARHGEF40Q8TER5 1519 aa8.38□□□□□ -1.07
LINC00342-201ENST00000412393 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 BCORL1Q5H9F3 1711 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 ADAMTSL3P82987 1691 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
LINC00342-201ENST00000412393 AP1G2O75843 785 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 FURINP09958 794 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 EDARADDQ8WWZ3 215 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 CDC42BPAQ5VT25 1732 aa8.37□□□□□ -1.07
LINC00342-201ENST00000412393 PREX2Q70Z35 1606 aa8.36□□□□□ -1.07
LINC00342-201ENST00000412393 ARID4BQ4LE39 1312 aaPredicted RBP8.36□□□□□ -1.07
LINC00342-201ENST00000412393 ZFYVE16Q7Z3T8 1539 aa8.36□□□□□ -1.07
LINC00342-201ENST00000412393 COL8A1P27658 744 aa8.36□□□□□ -1.07
LINC00342-201ENST00000412393 KLRG1Q96E93 195 aa8.36□□□□□ -1.07
LINC00342-201ENST00000412393 NOP53Q9NZM5 478 aaKnown RBP8.36□□□□□ -1.07
LINC00342-201ENST00000412393 MAGI2Q86UL8 1455 aa8.35□□□□□ -1.07
LINC00342-201ENST00000412393 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
LINC00342-201ENST00000412393 GNB5O14775 395 aa8.35□□□□□ -1.07
LINC00342-201ENST00000412393 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
LINC00342-201ENST00000412393 POGZQ7Z3K3 1410 aa8.35□□□□□ -1.07
LINC00342-201ENST00000412393 MADDQ8WXG6 1647 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 A0A1B0GTH6 734 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 CEP162Q5TB80 1403 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 YEATS2Q9ULM3 1422 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 SIGLEC1Q9BZZ2 1709 aa8.34□□□□□ -1.07
LINC00342-201ENST00000412393 ZBBXA8MT70 800 aa8.33□□□□□ -1.08
LINC00342-201ENST00000412393 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
LINC00342-201ENST00000412393 EPS8L1Q8TE68 723 aa8.33□□□□□ -1.08
LINC00342-201ENST00000412393 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
LINC00342-201ENST00000412393 ATXN7L1Q9ULK2 861 aaPredicted RBP8.33□□□□□ -1.08
LINC00342-201ENST00000412393 RIMS1Q86UR5 1692 aaKnown RBP8.33□□□□□ -1.08
LINC00342-201ENST00000412393 ITSN2Q9NZM3 1697 aa8.33□□□□□ -1.08
LINC00342-201ENST00000412393 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
LINC00342-201ENST00000412393 HECW2Q9P2P5 1572 aa8.32□□□□□ -1.08
LINC00342-201ENST00000412393 GRIN2CQ14957 1233 aa8.32□□□□□ -1.08
LINC00342-201ENST00000412393 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
LINC00342-201ENST00000412393 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
LINC00342-201ENST00000412393 ESF1Q9H501 851 aaKnown RBP8.32□□□□□ -1.08
LINC00342-201ENST00000412393 PTPRMP28827 1452 aa8.32□□□□□ -1.08
LINC00342-201ENST00000412393 KDM5CP41229 1560 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 FER1L4A9Z1Z3 1794 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 ABCC1P33527 1531 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 GNRH1P01148 92 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 AMPD1P23109 780 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 HMX1Q9NP08 348 aaPredicted RBP8.31□□□□□ -1.08
LINC00342-201ENST00000412393 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms