RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
SNRNP35-202ENST00000412157 VPS72Q15906 364 aa14.74□□□□□ -0.05
SNRNP35-202ENST00000412157 BARGINQ6ZT62 677 aa14.74□□□□□ -0.05
SNRNP35-202ENST00000412157 NECTIN2Q92692 538 aa14.74□□□□□ -0.05
SNRNP35-202ENST00000412157 LRP5O75197 1615 aa14.74□□□□□ -0.05
SNRNP35-202ENST00000412157 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
SNRNP35-202ENST00000412157 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
SNRNP35-202ENST00000412157 DDB1Q16531 1140 aa14.73□□□□□ -0.05
SNRNP35-202ENST00000412157 FMNL2Q96PY5 1086 aa14.73□□□□□ -0.05
SNRNP35-202ENST00000412157 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
SNRNP35-202ENST00000412157 PXDNLA1KZ92 1463 aa14.72□□□□□ -0.05
SNRNP35-202ENST00000412157 BAG6P46379 1132 aa14.72□□□□□ -0.05
SNRNP35-202ENST00000412157 KCPQ6ZWJ8 1503 aa14.71□□□□□ -0.05
SNRNP35-202ENST00000412157 THSD7AQ9UPZ6 1657 aa14.71□□□□□ -0.05
SNRNP35-202ENST00000412157 FLIIQ13045 1269 aa14.71□□□□□ -0.05
SNRNP35-202ENST00000412157 SNRPA1P09661 255 aaKnown RBP14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 FKBP5Q13451 457 aaPredicted RBP14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 G2E3Q7L622 706 aa14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 ZNF496Q96IT1 587 aaPredicted RBP14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 CHPF2Q9P2E5 772 aa14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 DBF4Q9UBU7 674 aaPredicted RBP14.7□□□□□ -0.06
SNRNP35-202ENST00000412157 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
SNRNP35-202ENST00000412157 INTS3Q68E01 1043 aaKnown RBP14.68□□□□□ -0.06
SNRNP35-202ENST00000412157 CCT4P50991 539 aaKnown RBP14.67□□□□□ -0.06
SNRNP35-202ENST00000412157 HYPKQ9NX55 129 aa14.67□□□□□ -0.06
SNRNP35-202ENST00000412157 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 BCL9O00512 1426 aa14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 PRAMEF22A3QJZ6 481 aa14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 SLC4A10Q6U841 1118 aa14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 RWDD1Q9H446 243 aaPredicted RBP14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 AFDNP55196 1824 aaKnown RBP14.66□□□□□ -0.06
SNRNP35-202ENST00000412157 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
SNRNP35-202ENST00000412157 ONECUT3O60422 494 aaPredicted RBP14.65□□□□□ -0.06
SNRNP35-202ENST00000412157 SYTL4Q96C24 671 aaPredicted RBP14.65□□□□□ -0.06
SNRNP35-202ENST00000412157 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
SNRNP35-202ENST00000412157 ZBTB40Q9NUA8 1239 aa14.65□□□□□ -0.06
SNRNP35-202ENST00000412157 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
SNRNP35-202ENST00000412157 F6X3S4 739 aa14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 FAM182BQ5T319 152 aa14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 PIGBQ92521 554 aa14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
SNRNP35-202ENST00000412157 TJP1Q07157 1748 aa14.63□□□□□ -0.07
SNRNP35-202ENST00000412157 NHSQ6T4R5 1651 aa14.63□□□□□ -0.07
SNRNP35-202ENST00000412157 PTCD1O75127 700 aaKnown RBP14.63□□□□□ -0.07
SNRNP35-202ENST00000412157 ANXA1P04083 346 aa14.63□□□□□ -0.07
SNRNP35-202ENST00000412157 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
SNRNP35-202ENST00000412157 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
SNRNP35-202ENST00000412157 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 R3HDM1Q15032 1099 aaKnown RBP14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 NUP188Q5SRE5 1749 aa14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 DNAAF4Q8WXU2 420 aa14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 TEX13AQ9BXU3 409 aaPredicted RBP14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 ATG3Q9NT62 314 aa14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 USP16Q9Y5T5 823 aa14.62□□□□□ -0.07
SNRNP35-202ENST00000412157 ATP10DQ9P241 1426 aa14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 MYL6BP14649 208 aa14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 PROSER3Q2NL68 480 aa14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 ASAP1Q9ULH1 1129 aa14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 BTAF1O14981 1849 aa14.61□□□□□ -0.07
SNRNP35-202ENST00000412157 ADCY9O60503 1353 aa14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 IGHDP01880 384 aa14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 HDAC1Q13547 482 aaPredicted RBP14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 PDIA6Q15084 440 aa14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 ACSBG1Q96GR2 724 aa14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 SRCIN1Q9C0H9 1055 aa14.6□□□□□ -0.07
SNRNP35-202ENST00000412157 ZNF831Q5JPB2 1677 aa14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 TNS1Q9HBL0 1735 aaKnown RBP14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 PI4KAP2A4QPH2 592 aa14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 GNAI3P08754 354 aa14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 PI4KAP1Q8N8J0 262 aa14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 C1orf115Q9H7X2 142 aa14.59□□□□□ -0.07
SNRNP35-202ENST00000412157 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
SNRNP35-202ENST00000412157 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.08
SNRNP35-202ENST00000412157 MEIS3Q99687 375 aa14.58□□□□□ -0.08
SNRNP35-202ENST00000412157 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.08
SNRNP35-202ENST00000412157 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
SNRNP35-202ENST00000412157 STARD3NLO95772 234 aa14.57□□□□□ -0.08
SNRNP35-202ENST00000412157 NEXNQ0ZGT2 675 aa14.57□□□□□ -0.08
SNRNP35-202ENST00000412157 EZH2Q15910 746 aaKnown RBP14.57□□□□□ -0.08
SNRNP35-202ENST00000412157 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-202ENST00000412157 COL5A3P25940 1745 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-202ENST00000412157 RREB1Q92766 1687 aa14.56□□□□□ -0.08
SNRNP35-202ENST00000412157 ANKRD36CQ5JPF3 1778 aa14.56□□□□□ -0.08
SNRNP35-202ENST00000412157 GNAI2P04899 355 aa14.56□□□□□ -0.08
SNRNP35-202ENST00000412157 BEND3Q5T5X7 828 aa14.56□□□□□ -0.08
SNRNP35-202ENST00000412157 COPS6Q7L5N1 327 aa14.56□□□□□ -0.08
SNRNP35-202ENST00000412157 DNAJC10Q8IXB1 793 aa14.56□□□□□ -0.08
SNRNP35-202ENST00000412157 TRIM37O94972 964 aa14.55□□□□□ -0.08
SNRNP35-202ENST00000412157 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
SNRNP35-202ENST00000412157 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms