RNA–Protein interactions for RNA: ENST00000411341.1

RN7SKP172-201, Transcript of RNA, 7SK small nuclear pseudogene 172, humanhuman

BASIC

Gene RN7SKP172, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP172-201ENST00000411341 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
RN7SKP172-201ENST00000411341 CHD4Q14839 1912 aa13.46□□□□□ -0.25
RN7SKP172-201ENST00000411341 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
RN7SKP172-201ENST00000411341 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP172-201ENST00000411341 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
RN7SKP172-201ENST00000411341 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
RN7SKP172-201ENST00000411341 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
RN7SKP172-201ENST00000411341 PXDNLA1KZ92 1463 aa13.44□□□□□ -0.26
RN7SKP172-201ENST00000411341 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
RN7SKP172-201ENST00000411341 SERPINB2P05120 415 aa13.44□□□□□ -0.26
RN7SKP172-201ENST00000411341 TM4SF1P30408 202 aa13.44□□□□□ -0.26
RN7SKP172-201ENST00000411341 C10orf71Q711Q0 1435 aa13.44□□□□□ -0.26
RN7SKP172-201ENST00000411341 MRC1P22897 1456 aa13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 H0YIN7 160 aa13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 POLRMTO00411 1230 aaKnown RBP13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 DDR1Q08345 913 aa13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 NFIXQ14938 502 aa13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 SCN11AQ9UI33 1791 aa13.43□□□□□ -0.26
RN7SKP172-201ENST00000411341 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
RN7SKP172-201ENST00000411341 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
RN7SKP172-201ENST00000411341 SNRPA1P09661 255 aaKnown RBP13.42□□□□□ -0.26
RN7SKP172-201ENST00000411341 CHRNA5P30532 468 aa13.42□□□□□ -0.26
RN7SKP172-201ENST00000411341 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
RN7SKP172-201ENST00000411341 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
RN7SKP172-201ENST00000411341 EIF5P55010 431 aaKnown RBP13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 MCM10Q7L590 875 aa13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 C16orf71Q8IYS4 520 aaPredicted RBP13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 PNISRQ8TF01 805 aaKnown RBP13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 SETDB2Q96T68 719 aa13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
RN7SKP172-201ENST00000411341 PDE6BP35913 854 aa13.4□□□□□ -0.26
RN7SKP172-201ENST00000411341 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
RN7SKP172-201ENST00000411341 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
RN7SKP172-201ENST00000411341 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 A1BGP04217 495 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 KCNA3P22001 575 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 ST5P78524 1137 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 C9orf131Q5VYM1 1079 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 TTLL6Q8N841 843 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 TJP1Q07157 1748 aa13.39□□□□□ -0.27
RN7SKP172-201ENST00000411341 RALBP1Q15311 655 aa13.38□□□□□ -0.27
RN7SKP172-201ENST00000411341 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
RN7SKP172-201ENST00000411341 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
RN7SKP172-201ENST00000411341 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
RN7SKP172-201ENST00000411341 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
RN7SKP172-201ENST00000411341 KCNQ3O43525 872 aa13.37□□□□□ -0.27
RN7SKP172-201ENST00000411341 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
RN7SKP172-201ENST00000411341 CNBD1Q8NA66 436 aa13.37□□□□□ -0.27
RN7SKP172-201ENST00000411341 ADCY9O60503 1353 aa13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
RN7SKP172-201ENST00000411341 TOMM70O94826 608 aa13.35□□□□□ -0.27
RN7SKP172-201ENST00000411341 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP172-201ENST00000411341 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 DDX10Q13206 875 aaKnown RBP13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
RN7SKP172-201ENST00000411341 CAMTA2O94983 1202 aa13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 HSPA6P17066 643 aa13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 LMNB1P20700 586 aa13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP172-201ENST00000411341 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 NGEFQ8N5V2 710 aa13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 NIP7Q9Y221 180 aaKnown RBP eCLIP13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 KIF13BQ9NQT8 1826 aa13.32□□□□□ -0.28
RN7SKP172-201ENST00000411341 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
RN7SKP172-201ENST00000411341 KIF3CO14782 793 aa13.31□□□□□ -0.28
RN7SKP172-201ENST00000411341 RIPK4P57078 832 aa13.31□□□□□ -0.28
RN7SKP172-201ENST00000411341 CCDC24Q8N4L8 307 aa13.31□□□□□ -0.28
RN7SKP172-201ENST00000411341 RRP7AQ9Y3A4 280 aaKnown RBP13.31□□□□□ -0.28
RN7SKP172-201ENST00000411341 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
RN7SKP172-201ENST00000411341 C21orf2O43822 256 aa13.3□□□□□ -0.28
RN7SKP172-201ENST00000411341 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
RN7SKP172-201ENST00000411341 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
RN7SKP172-201ENST00000411341 TSPYL4Q9UJ04 414 aa13.3□□□□□ -0.28
RN7SKP172-201ENST00000411341 ZC3H4Q9UPT8 1303 aaKnown RBP13.3□□□□□ -0.28
RN7SKP172-201ENST00000411341 RGL2O15211 777 aa13.29□□□□□ -0.28
RN7SKP172-201ENST00000411341 APLP1P51693 650 aa13.29□□□□□ -0.28
RN7SKP172-201ENST00000411341 RASSF7Q02833 373 aa13.29□□□□□ -0.28
RN7SKP172-201ENST00000411341 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
RN7SKP172-201ENST00000411341 PLEKHF1Q96S99 279 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms