RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
RN7SKP54-201ENST00000410704 TJP1Q07157 1748 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 KCNQ4P56696 695 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 RGPD3A6NKT7 1758 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 RGPD4Q7Z3J3 1758 aa12.93□□□□□ -0.34
RN7SKP54-201ENST00000410704 A1BGP04217 495 aa12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 HYPKQ9NX55 129 aa12.92□□□□□ -0.34
RN7SKP54-201ENST00000410704 BCAR3O75815 825 aa12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 MYL6BP14649 208 aa12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 RC3H1Q5TC82 1133 aaKnown RBP12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 AK7Q96M32 723 aa12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
RN7SKP54-201ENST00000410704 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 EZH2Q15910 746 aaKnown RBP12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 INTS5Q6P9B9 1019 aaKnown RBP12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 ILDR2Q71H61 639 aa12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 PROM2Q8N271 834 aa12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
RN7SKP54-201ENST00000410704 EP400Q96L91 3159 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 ANXA1P04083 346 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 PDIA6Q15084 440 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 NBPF10Q6P3W6 841 aaKnown RBP12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 NBPF15Q8N660 670 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP54-201ENST00000410704 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 GNPATO15228 680 aa12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 IL6STP40189 918 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 PTPRCP08575 1304 aa12.88□□□□□ -0.35
RN7SKP54-201ENST00000410704 RREB1Q92766 1687 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 A0A087WZG4 1122 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 AIMP1Q12904 312 aaKnown RBP12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 FLIIQ13045 1269 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 XAGE3Q8WTP9 111 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 ARXQ96QS3 562 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 PHAXQ9H814 394 aaKnown RBP12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 TAF1LQ8IZX4 1826 aa12.87□□□□□ -0.35
RN7SKP54-201ENST00000410704 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
RN7SKP54-201ENST00000410704 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
RN7SKP54-201ENST00000410704 G2E3Q7L622 706 aa12.86□□□□□ -0.35
RN7SKP54-201ENST00000410704 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
RN7SKP54-201ENST00000410704 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
RN7SKP54-201ENST00000410704 SUPT16HQ9Y5B9 1047 aaKnown RBP12.86□□□□□ -0.35
RN7SKP54-201ENST00000410704 COL15A1P39059 1388 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 MS4A1P11836 297 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 ADRA2BP18089 450 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 LRP10Q7Z4F1 713 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 STK32BQ9NY57 414 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 CACNA1FO60840 1977 aa12.85□□□□□ -0.35
RN7SKP54-201ENST00000410704 PHF14O94880 888 aa12.84□□□□□ -0.35
RN7SKP54-201ENST00000410704 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
RN7SKP54-201ENST00000410704 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
RN7SKP54-201ENST00000410704 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
RN7SKP54-201ENST00000410704 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
RN7SKP54-201ENST00000410704 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
RN7SKP54-201ENST00000410704 PLIN1O60240 522 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 SSFA2P28290 1259 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 RFC4P35249 363 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 ZNF827Q17R98 1081 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 PLBD2Q8NHP8 589 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
RN7SKP54-201ENST00000410704 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
RN7SKP54-201ENST00000410704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms