RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 MYD88Q99836 296 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 FERMT1Q9BQL6 677 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 SLC5A1P13866 664 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 GPTP24298 496 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 SH3BP5O60239 455 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
PRPF40A-202ENST00000410080 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 BAG4O95429 457 aaKnown RBP13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 GUCY1B3Q02153 619 aa13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 CDK13Q14004 1512 aaKnown RBP13.02□□□□□ -0.32
PRPF40A-202ENST00000410080 TRAK2O60296 914 aa13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 RAB34Q9BZG1 259 aa13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 AKNAQ7Z591 1439 aa13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 PRKCSHP14314 528 aaPredicted RBP13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 ERLIN1O75477 346 aa13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 MCM10Q7L590 875 aa13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
PRPF40A-202ENST00000410080 IFIT5Q13325 482 aaKnown RBP13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 TCERG1LQ5VWI1 586 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 PRC1O43663 620 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 TERF1P54274 439 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 CASQ1P31415 396 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 IQCA1Q86XH1 822 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 APBB1IPQ7Z5R6 666 aaPredicted RBP13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
PRPF40A-202ENST00000410080 MBD3O95983 291 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 ANKRD18BA2A2Z9 1011 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 CCDC66A2RUB6 948 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
PRPF40A-202ENST00000410080 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
PRPF40A-202ENST00000410080 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
PRPF40A-202ENST00000410080 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 U3KPZ7 1027 aaPredicted RBP13□□□□□ -0.33
PRPF40A-202ENST00000410080 TDRD12Q587J7 1177 aaKnown RBP13□□□□□ -0.33
PRPF40A-202ENST00000410080 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 GIMAP7Q8NHV1 300 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 A0A087WZG4 1122 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 ERICH4A6NGS2 130 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 MAP3K12Q12852 859 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 RAB3IL1Q8TBN0 382 aa13□□□□□ -0.33
PRPF40A-202ENST00000410080 SMTNL1A8MU46 457 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 MYZAPP0CAP1 466 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 GCC1Q96CN9 775 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 DDX46Q7L014 1031 aaKnown RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 HLA-DOAP06340 250 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 PPP1R14CQ8TAE6 165 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 CETN1Q12798 172 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 LRRC45Q96CN5 670 aa12.99□□□□□ -0.33
PRPF40A-202ENST00000410080 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 KIAA1107Q9UPP5 1409 aa12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 ODF2LQ9ULJ1 636 aa12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 UQCRHP07919 91 aa12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 TICAM2Q86XR7 235 aa12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 NOP2P46087 812 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-202ENST00000410080 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 CALML4Q96GE6 196 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 CRACR2AQ9BSW2 395 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 CCDC174Q6PII3 467 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 ZNF213O14771 459 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 PHACTR2O75167 634 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 EP400NLQ6ZTU2 488 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
PRPF40A-202ENST00000410080 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
PRPF40A-202ENST00000410080 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms