RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 ZHX1Q9UKY1 873 aaPredicted RBP4.12□□□□□ -1.75
RGPD3-202ENST00000409886 COL5A3P25940 1745 aaPredicted RBP4.12□□□□□ -1.75
RGPD3-202ENST00000409886 PASKQ96RG2 1323 aa4.12□□□□□ -1.75
RGPD3-202ENST00000409886 NAA30Q147X3 362 aaPredicted RBP4.12□□□□□ -1.75
RGPD3-202ENST00000409886 RASSF10A6NK89 507 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 TBC1D2Q9BYX2 928 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 MAP2P11137 1827 aaKnown RBP4.11□□□□□ -1.75
RGPD3-202ENST00000409886 TONSLQ96HA7 1378 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 FAM182BQ5T319 152 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 LAMB4A4D0S4 1761 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 CNTRLQ7Z7A1 2325 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 BSNQ9UPA5 3926 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 ERICH6BQ5W0A0 696 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 ZBTB7CA1YPR0 619 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 DLL1O00548 723 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 HABP4Q5JVS0 413 aaKnown RBP4.11□□□□□ -1.75
RGPD3-202ENST00000409886 NFAT5O94916 1531 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 FBLN1P23142 703 aa4.11□□□□□ -1.75
RGPD3-202ENST00000409886 ARIH1Q9Y4X5 557 aaPredicted RBP4.11□□□□□ -1.75
RGPD3-202ENST00000409886 GTF2E1P29083 439 aaPredicted RBP4.1□□□□□ -1.75
RGPD3-202ENST00000409886 C17orf53Q8N3J3 647 aaPredicted RBP4.1□□□□□ -1.75
RGPD3-202ENST00000409886 FAM163AQ96GL9 167 aaPredicted RBP4.1□□□□□ -1.75
RGPD3-202ENST00000409886 CPSF1Q10570 1443 aaKnown RBP4.1□□□□□ -1.75
RGPD3-202ENST00000409886 FER1L6Q2WGJ9 1857 aa4.1□□□□□ -1.75
RGPD3-202ENST00000409886 NMRK2Q9NPI5 230 aa4.1□□□□□ -1.75
RGPD3-202ENST00000409886 RCAN3Q9UKA8 241 aa4.1□□□□□ -1.75
RGPD3-202ENST00000409886 WDR17Q8IZU2 1322 aa4.1□□□□□ -1.75
RGPD3-202ENST00000409886 VGLL3A8MV65 326 aa4.1□□□□□ -1.75
RGPD3-202ENST00000409886 EVA1CP58658 441 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 MARCH10Q8NA82 808 aaPredicted RBP4.09□□□□□ -1.75
RGPD3-202ENST00000409886 PANK1Q8TE04 598 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 CARD10Q9BWT7 1032 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 PANK3Q9H999 370 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 NSD2O96028 1365 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 KIF20BQ96Q89 1820 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 CABLES1Q8TDN4 633 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 EIF4G2P78344 907 aaKnown RBP eCLIP4.09□□□□□ -1.75
RGPD3-202ENST00000409886 NFATC2IPQ8NCF5 419 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 DCAF5Q96JK2 942 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 ANKRD36BQ8N2N9 1353 aa4.09□□□□□ -1.75
RGPD3-202ENST00000409886 MON2Q7Z3U7 1717 aa4.09□□□□□ -1.76
RGPD3-202ENST00000409886 CCDC85CA6NKD9 419 aa4.09□□□□□ -1.76
RGPD3-202ENST00000409886 ZSCAN20P17040 1043 aaPredicted RBP4.09□□□□□ -1.76
RGPD3-202ENST00000409886 LTN1O94822 1766 aa4.09□□□□□ -1.76
RGPD3-202ENST00000409886 LBX1P52954 281 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 XPCQ01831 940 aaPredicted RBP4.08□□□□□ -1.76
RGPD3-202ENST00000409886 CHADLQ6NUI6 762 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 PODXL2Q9NZ53 605 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 HHIPL1Q96JK4 782 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 SAGE1Q9NXZ1 904 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 ERICH6Q7L0X2 663 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 CCDC146Q8IYE0 955 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 ZNF710Q8N1W2 664 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 KDM2AQ9Y2K7 1162 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 DMXL2Q8TDJ6 3036 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 VEGFAP15692 232 aaPredicted RBP4.08□□□□□ -1.76
RGPD3-202ENST00000409886 DDIT3P35638 169 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 LARP1Q6PKG0 1096 aaKnown RBP4.08□□□□□ -1.76
RGPD3-202ENST00000409886 CLUAP1Q96AJ1 413 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 ZNF526Q8TF50 670 aaPredicted RBP4.08□□□□□ -1.76
RGPD3-202ENST00000409886 CEP290O15078 2479 aa4.08□□□□□ -1.76
RGPD3-202ENST00000409886 TRMT2AQ8IZ69 625 aaKnown RBP4.07□□□□□ -1.76
RGPD3-202ENST00000409886 ZBTB9Q96C00 473 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 ZNF830Q96NB3 372 aaPredicted RBP4.07□□□□□ -1.76
RGPD3-202ENST00000409886 MCOLN1Q9GZU1 580 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 CCDC88AQ3V6T2 1871 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 LAMA4Q16363 1823 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 IGSF5Q9NSI5 407 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 CHD7Q9P2D1 2997 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 CC2D1BQ5T0F9 858 aaKnown RBP4.07□□□□□ -1.76
RGPD3-202ENST00000409886 ANKRD26Q9UPS8 1709 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 ECE1P42892 770 aa4.07□□□□□ -1.76
RGPD3-202ENST00000409886 CHMP4BQ9H444 224 aaKnown RBP4.07□□□□□ -1.76
RGPD3-202ENST00000409886 MAP2K2P36507 400 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 COG6Q9Y2V7 657 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 TRANK1O15050 2925 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 SYNGAP1Q96PV0 1343 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 GLTPD2A6NH11 291 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 FXR1P51114 621 aaKnown RBP eCLIP4.06□□□□□ -1.76
RGPD3-202ENST00000409886 PKN2Q16513 984 aaKnown RBP4.06□□□□□ -1.76
RGPD3-202ENST00000409886 TMEM88BA6NKF7 163 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 PLCD3Q8N3E9 789 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 CARD14Q9BXL6 1004 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 KTN1Q86UP2 1357 aaKnown RBP4.06□□□□□ -1.76
RGPD3-202ENST00000409886 MICAL3Q7RTP6 2002 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 AP5Z1O43299 807 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 GPR153Q6NV75 609 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 RRAGCQ9HB90 399 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 USP47Q96K76 1375 aa4.06□□□□□ -1.76
RGPD3-202ENST00000409886 TSGA10IPQ3SY00 556 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 C9orf131Q5VYM1 1079 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 IL25Q9H293 177 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 LTBP3Q9NS15 1303 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 SSFA2P28290 1259 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 LDHDQ86WU2 507 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 TMEM51Q9NW97 253 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 KDM3BQ7LBC6 1761 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 CLCN1P35523 988 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 ANP32AP39687 249 aaKnown RBP4.05□□□□□ -1.76
RGPD3-202ENST00000409886 VEGFBP49765 207 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 979 ms