RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 FMNL2Q96PY5 1086 aa17.99■□□□□ 0.47
MINDY4-202ENST00000409881 RRAGDQ9NQL2 400 aaPredicted RBP17.99■□□□□ 0.47
MINDY4-202ENST00000409881 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
MINDY4-202ENST00000409881 VAMP4O75379 141 aa17.98■□□□□ 0.47
MINDY4-202ENST00000409881 NHSQ6T4R5 1651 aa17.98■□□□□ 0.47
MINDY4-202ENST00000409881 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
MINDY4-202ENST00000409881 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
MINDY4-202ENST00000409881 BCL2L13Q9BXK5 485 aa17.97■□□□□ 0.47
MINDY4-202ENST00000409881 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
MINDY4-202ENST00000409881 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.47
MINDY4-202ENST00000409881 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
MINDY4-202ENST00000409881 SBF2Q86WG5 1849 aa17.96■□□□□ 0.47
MINDY4-202ENST00000409881 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
MINDY4-202ENST00000409881 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
MINDY4-202ENST00000409881 TRIM37O94972 964 aa17.95■□□□□ 0.46
MINDY4-202ENST00000409881 EIF2S2P20042 333 aaKnown RBP17.95■□□□□ 0.46
MINDY4-202ENST00000409881 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
MINDY4-202ENST00000409881 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
MINDY4-202ENST00000409881 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
MINDY4-202ENST00000409881 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
MINDY4-202ENST00000409881 BCAR3O75815 825 aa17.94■□□□□ 0.46
MINDY4-202ENST00000409881 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
MINDY4-202ENST00000409881 SLKQ9H2G2 1235 aaPredicted RBP17.94■□□□□ 0.46
MINDY4-202ENST00000409881 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
MINDY4-202ENST00000409881 BTAF1O14981 1849 aa17.94■□□□□ 0.46
MINDY4-202ENST00000409881 HOXB7P09629 217 aa17.94■□□□□ 0.46
MINDY4-202ENST00000409881 HDGFL1Q5TGJ6 251 aa17.94■□□□□ 0.46
MINDY4-202ENST00000409881 SMARCC1Q92922 1105 aaPredicted RBP17.94■□□□□ 0.46
MINDY4-202ENST00000409881 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
MINDY4-202ENST00000409881 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.93■□□□□ 0.46
MINDY4-202ENST00000409881 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
MINDY4-202ENST00000409881 ARXQ96QS3 562 aa17.93■□□□□ 0.46
MINDY4-202ENST00000409881 C5P01031 1676 aa17.92■□□□□ 0.46
MINDY4-202ENST00000409881 SEC24BO95487 1268 aa17.91■□□□□ 0.46
MINDY4-202ENST00000409881 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
MINDY4-202ENST00000409881 CCDC30Q5VVM6 783 aa17.91■□□□□ 0.46
MINDY4-202ENST00000409881 EP400Q96L91 3159 aa17.91■□□□□ 0.46
MINDY4-202ENST00000409881 SLC4A9Q96Q91 983 aa17.91■□□□□ 0.46
MINDY4-202ENST00000409881 USP16Q9Y5T5 823 aa17.91■□□□□ 0.46
MINDY4-202ENST00000409881 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
MINDY4-202ENST00000409881 SIK1P57059 783 aa17.9■□□□□ 0.46
MINDY4-202ENST00000409881 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
MINDY4-202ENST00000409881 DNAJC10Q8IXB1 793 aa17.9■□□□□ 0.46
MINDY4-202ENST00000409881 VSIG10Q8N0Z9 540 aa17.9■□□□□ 0.46
MINDY4-202ENST00000409881 ATP6V1AP38606 617 aa17.89■□□□□ 0.45
MINDY4-202ENST00000409881 CHPF2Q9P2E5 772 aa17.89■□□□□ 0.45
MINDY4-202ENST00000409881 IGHDP01880 384 aa17.88■□□□□ 0.45
MINDY4-202ENST00000409881 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
MINDY4-202ENST00000409881 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
MINDY4-202ENST00000409881 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
MINDY4-202ENST00000409881 MRPL50Q8N5N7 158 aaKnown RBP17.88■□□□□ 0.45
MINDY4-202ENST00000409881 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
MINDY4-202ENST00000409881 LAMB4A4D0S4 1761 aa17.87■□□□□ 0.45
MINDY4-202ENST00000409881 ANXA1P04083 346 aa17.87■□□□□ 0.45
MINDY4-202ENST00000409881 KCNQ4P56696 695 aa17.87■□□□□ 0.45
MINDY4-202ENST00000409881 BECN1Q14457 450 aa17.87■□□□□ 0.45
MINDY4-202ENST00000409881 TEX13AQ9BXU3 409 aaPredicted RBP17.87■□□□□ 0.45
MINDY4-202ENST00000409881 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
MINDY4-202ENST00000409881 STARD3NLO95772 234 aa17.86■□□□□ 0.45
MINDY4-202ENST00000409881 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
MINDY4-202ENST00000409881 KIF16BQ96L93 1317 aa17.85■□□□□ 0.45
MINDY4-202ENST00000409881 TJP1Q07157 1748 aa17.85■□□□□ 0.45
MINDY4-202ENST00000409881 APBA3O96018 575 aa17.85■□□□□ 0.45
MINDY4-202ENST00000409881 ITPK1Q13572 414 aa17.85■□□□□ 0.45
MINDY4-202ENST00000409881 PROSER3Q2NL68 480 aa17.85■□□□□ 0.45
MINDY4-202ENST00000409881 PKNOX2Q96KN3 472 aa17.85■□□□□ 0.45
MINDY4-202ENST00000409881 CCNL1Q9UK58 526 aaPredicted RBP17.85■□□□□ 0.45
MINDY4-202ENST00000409881 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
MINDY4-202ENST00000409881 A1BGP04217 495 aa17.84■□□□□ 0.45
MINDY4-202ENST00000409881 MYL6BP14649 208 aa17.84■□□□□ 0.45
MINDY4-202ENST00000409881 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.45
MINDY4-202ENST00000409881 G2E3Q7L622 706 aa17.83■□□□□ 0.45
MINDY4-202ENST00000409881 NAP1L5Q96NT1 182 aaPredicted RBP17.83■□□□□ 0.44
MINDY4-202ENST00000409881 DDX21Q9NR30 783 aaKnown RBP eCLIP17.83■□□□□ 0.44
MINDY4-202ENST00000409881 BRPF1P55201 1214 aaPredicted RBP17.82■□□□□ 0.44
MINDY4-202ENST00000409881 PDIA6Q15084 440 aa17.82■□□□□ 0.44
MINDY4-202ENST00000409881 LY75O60449 1722 aa17.82■□□□□ 0.44
MINDY4-202ENST00000409881 ZKSCAN2Q63HK3 967 aa17.82■□□□□ 0.44
MINDY4-202ENST00000409881 PHAXQ9H814 394 aaKnown RBP17.82■□□□□ 0.44
MINDY4-202ENST00000409881 TNS1Q9HBL0 1735 aaKnown RBP17.82■□□□□ 0.44
MINDY4-202ENST00000409881 NBPF26B4DH59 902 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
MINDY4-202ENST00000409881 NBPF14Q5TI25 921 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 NBPF10Q6P3W6 841 aaKnown RBP17.81■□□□□ 0.44
MINDY4-202ENST00000409881 NBPF15Q8N660 670 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 ANTXR1Q9H6X2 564 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 IPO8O15397 1037 aaKnown RBP17.81■□□□□ 0.44
MINDY4-202ENST00000409881 FLIIQ13045 1269 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 LINC00116Q8NCU8 138 aa17.81■□□□□ 0.44
MINDY4-202ENST00000409881 ZNF330Q9Y3S2 320 aaPredicted RBP17.81■□□□□ 0.44
MINDY4-202ENST00000409881 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
MINDY4-202ENST00000409881 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
MINDY4-202ENST00000409881 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
MINDY4-202ENST00000409881 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
MINDY4-202ENST00000409881 ZNF831Q5JPB2 1677 aa17.79■□□□□ 0.44
MINDY4-202ENST00000409881 AIMP1Q12904 312 aaKnown RBP17.79■□□□□ 0.44
MINDY4-202ENST00000409881 FKBP5Q13451 457 aaPredicted RBP17.79■□□□□ 0.44
MINDY4-202ENST00000409881 ATF7IPQ6VMQ6 1270 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms