RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ANXA1P04083 346 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 FKBP5Q13451 457 aaPredicted RBP24.47■■□□□ 1.51
LIMS2-207ENST00000409808 CHPF2Q9P2E5 772 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 CACNA1FO60840 1977 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 PLEKHG2Q9H7P9 1386 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
LIMS2-207ENST00000409808 FSD2A1L4K1 749 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 GOLGA6L3A6NEY3 463 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 ZNF790Q6PG37 636 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 PCDH11XQ9BZA7 1347 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 PCDH11YQ9BZA8 1340 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 TRAK2O60296 914 aa24.45■■□□□ 1.51
LIMS2-207ENST00000409808 SHANK3Q9BYB0 1731 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 HEG1Q9ULI3 1381 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 HSP90AB1P08238 724 aaKnown RBP24.45■■□□□ 1.5
LIMS2-207ENST00000409808 HOXB7P09629 217 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 PTMSP20962 102 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 SIRT2Q8IXJ6 389 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 CABP4P57796 275 aa24.44■■□□□ 1.5
LIMS2-207ENST00000409808 ISY1Q9ULR0 285 aaKnown RBP24.44■■□□□ 1.5
LIMS2-207ENST00000409808 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
LIMS2-207ENST00000409808 MEIS3Q99687 375 aa24.42■■□□□ 1.5
LIMS2-207ENST00000409808 MRC1P22897 1456 aa24.42■■□□□ 1.5
LIMS2-207ENST00000409808 TBC1D9Q6ZT07 1266 aa24.41■■□□□ 1.5
LIMS2-207ENST00000409808 CDC45O75419 566 aa24.41■■□□□ 1.5
LIMS2-207ENST00000409808 PROSER3Q2NL68 480 aa24.41■■□□□ 1.5
LIMS2-207ENST00000409808 ZNF496Q96IT1 587 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-207ENST00000409808 KIF2CQ99661 725 aa24.4■■□□□ 1.5
LIMS2-207ENST00000409808 DCTPP1Q9H773 170 aa24.4■■□□□ 1.5
LIMS2-207ENST00000409808 PLCH1Q4KWH8 1693 aa24.4■■□□□ 1.5
LIMS2-207ENST00000409808 C5P01031 1676 aa24.39■■□□□ 1.5
LIMS2-207ENST00000409808 GBP4Q96PP9 640 aa24.39■■□□□ 1.5
LIMS2-207ENST00000409808 CCT4P50991 539 aaKnown RBP24.38■■□□□ 1.49
LIMS2-207ENST00000409808 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
LIMS2-207ENST00000409808 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
LIMS2-207ENST00000409808 RPAP2Q8IXW5 612 aaPredicted RBP24.37■■□□□ 1.49
LIMS2-207ENST00000409808 XRCC6P12956 609 aaKnown RBP eCLIP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 RAB3GAP1Q15042 981 aa24.36■■□□□ 1.49
LIMS2-207ENST00000409808 SKOR2Q2VWA4 1001 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 ANO8Q9HCE9 1232 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 DBF4Q9UBU7 674 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 K7ELQ4 463 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 MRE11P49959 708 aa24.36■■□□□ 1.49
LIMS2-207ENST00000409808 ANKRD44Q8N8A2 993 aa24.35■■□□□ 1.49
LIMS2-207ENST00000409808 PI4KAP2A4QPH2 592 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 ERVV-2B6SEH9 535 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 PLEKHM2Q8IWE5 1019 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 PI4KAP1Q8N8J0 262 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 TNPO1Q92973 898 aaKnown RBP24.34■■□□□ 1.49
LIMS2-207ENST00000409808 USP16Q9Y5T5 823 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 DISP2A7MBM2 1401 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 CHMP4AQ9BY43 222 aa24.33■■□□□ 1.49
LIMS2-207ENST00000409808 TOGARAM1Q9Y4F4 1720 aa24.33■■□□□ 1.49
LIMS2-207ENST00000409808 PDIA6Q15084 440 aa24.33■■□□□ 1.48
LIMS2-207ENST00000409808 PIP4K2AP48426 406 aaPredicted RBP24.32■■□□□ 1.48
LIMS2-207ENST00000409808 FMNL2Q96PY5 1086 aa24.32■■□□□ 1.48
LIMS2-207ENST00000409808 ATP10DQ9P241 1426 aa24.32■■□□□ 1.48
LIMS2-207ENST00000409808 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
LIMS2-207ENST00000409808 HSP90AA1P07900 732 aaKnown RBP24.32■■□□□ 1.48
LIMS2-207ENST00000409808 TTC22Q5TAA0 569 aa24.31■■□□□ 1.48
LIMS2-207ENST00000409808 GZF1Q9H116 711 aaPredicted RBP24.31■■□□□ 1.48
LIMS2-207ENST00000409808 SNRPA1P09661 255 aaKnown RBP24.3■■□□□ 1.48
LIMS2-207ENST00000409808 MYL6BP14649 208 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 CEP85Q6P2H3 762 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 ADCY9O60503 1353 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 AIMP1Q12904 312 aaKnown RBP24.3■■□□□ 1.48
LIMS2-207ENST00000409808 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 RABEP1Q15276 862 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
LIMS2-207ENST00000409808 GSPT1P15170 499 aaKnown RBP24.29■■□□□ 1.48
LIMS2-207ENST00000409808 CLEC17AQ6ZS10 378 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 CERKQ8TCT0 537 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 DNAAF4Q8WXU2 420 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 N4BP2Q86UW6 1770 aaPredicted RBP24.28■■□□□ 1.48
LIMS2-207ENST00000409808 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
LIMS2-207ENST00000409808 GLI3P10071 1580 aa24.28■■□□□ 1.48
LIMS2-207ENST00000409808 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
LIMS2-207ENST00000409808 HYPKQ9NX55 129 aa24.28■■□□□ 1.48
LIMS2-207ENST00000409808 EXOC5O00471 708 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 MAP3K2Q9Y2U5 619 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 CCDC9Q9Y3X0 531 aaKnown RBP24.27■■□□□ 1.48
LIMS2-207ENST00000409808 PXDNLA1KZ92 1463 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 WNK3Q9BYP7 1800 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 BEND3Q5T5X7 828 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 CASC1Q6TDU7 716 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 SRCIN1Q9C0H9 1055 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 TMOD3Q9NYL9 352 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 C8orf37Q96NL8 207 aa24.25■■□□□ 1.47
LIMS2-207ENST00000409808 GNAI2P04899 355 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 GRPEL1Q9HAV7 217 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 SLIT2O94813 1529 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 GOLGA6L22H0YM25 854 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 KSR2Q6VAB6 950 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 PIGBQ92521 554 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 KCPQ6ZWJ8 1503 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 JCADQ9P266 1359 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 CD2BP2O95400 341 aaKnown RBP24.23■■□□□ 1.47
LIMS2-207ENST00000409808 PAPPAQ13219 1627 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms