RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ANXA1P04083 346 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 FKBP5Q13451 457 aaPredicted RBP24.47■■□□□ 1.51
LIMS2-207ENST00000409808 CHPF2Q9P2E5 772 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 CACNA1FO60840 1977 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 PLEKHG2Q9H7P9 1386 aa24.47■■□□□ 1.51
LIMS2-207ENST00000409808 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
LIMS2-207ENST00000409808 FSD2A1L4K1 749 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 GOLGA6L3A6NEY3 463 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 ZNF790Q6PG37 636 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 PCDH11XQ9BZA7 1347 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 PCDH11YQ9BZA8 1340 aa24.46■■□□□ 1.51
LIMS2-207ENST00000409808 TRAK2O60296 914 aa24.45■■□□□ 1.51
LIMS2-207ENST00000409808 SHANK3Q9BYB0 1731 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 HEG1Q9ULI3 1381 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 HSP90AB1P08238 724 aaKnown RBP24.45■■□□□ 1.5
LIMS2-207ENST00000409808 HOXB7P09629 217 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 PTMSP20962 102 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 SIRT2Q8IXJ6 389 aa24.45■■□□□ 1.5
LIMS2-207ENST00000409808 CABP4P57796 275 aa24.44■■□□□ 1.5
LIMS2-207ENST00000409808 ISY1Q9ULR0 285 aaKnown RBP24.44■■□□□ 1.5
LIMS2-207ENST00000409808 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
LIMS2-207ENST00000409808 MEIS3Q99687 375 aa24.42■■□□□ 1.5
LIMS2-207ENST00000409808 MRC1P22897 1456 aa24.42■■□□□ 1.5
LIMS2-207ENST00000409808 TBC1D9Q6ZT07 1266 aa24.41■■□□□ 1.5
LIMS2-207ENST00000409808 CDC45O75419 566 aa24.41■■□□□ 1.5
LIMS2-207ENST00000409808 PROSER3Q2NL68 480 aa24.41■■□□□ 1.5
LIMS2-207ENST00000409808 ZNF496Q96IT1 587 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-207ENST00000409808 KIF2CQ99661 725 aa24.4■■□□□ 1.5
LIMS2-207ENST00000409808 DCTPP1Q9H773 170 aa24.4■■□□□ 1.5
LIMS2-207ENST00000409808 PLCH1Q4KWH8 1693 aa24.4■■□□□ 1.5
LIMS2-207ENST00000409808 C5P01031 1676 aa24.39■■□□□ 1.5
LIMS2-207ENST00000409808 GBP4Q96PP9 640 aa24.39■■□□□ 1.5
LIMS2-207ENST00000409808 CCT4P50991 539 aaKnown RBP24.38■■□□□ 1.49
LIMS2-207ENST00000409808 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
LIMS2-207ENST00000409808 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
LIMS2-207ENST00000409808 RPAP2Q8IXW5 612 aaPredicted RBP24.37■■□□□ 1.49
LIMS2-207ENST00000409808 XRCC6P12956 609 aaKnown RBP eCLIP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 RAB3GAP1Q15042 981 aa24.36■■□□□ 1.49
LIMS2-207ENST00000409808 SKOR2Q2VWA4 1001 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 ANO8Q9HCE9 1232 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 DBF4Q9UBU7 674 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 K7ELQ4 463 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-207ENST00000409808 MRE11P49959 708 aa24.36■■□□□ 1.49
LIMS2-207ENST00000409808 ANKRD44Q8N8A2 993 aa24.35■■□□□ 1.49
LIMS2-207ENST00000409808 PI4KAP2A4QPH2 592 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 ERVV-2B6SEH9 535 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 PLEKHM2Q8IWE5 1019 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 PI4KAP1Q8N8J0 262 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 TNPO1Q92973 898 aaKnown RBP24.34■■□□□ 1.49
LIMS2-207ENST00000409808 USP16Q9Y5T5 823 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 DISP2A7MBM2 1401 aa24.34■■□□□ 1.49
LIMS2-207ENST00000409808 CHMP4AQ9BY43 222 aa24.33■■□□□ 1.49
LIMS2-207ENST00000409808 TOGARAM1Q9Y4F4 1720 aa24.33■■□□□ 1.49
LIMS2-207ENST00000409808 PDIA6Q15084 440 aa24.33■■□□□ 1.48
LIMS2-207ENST00000409808 PIP4K2AP48426 406 aaPredicted RBP24.32■■□□□ 1.48
LIMS2-207ENST00000409808 FMNL2Q96PY5 1086 aa24.32■■□□□ 1.48
LIMS2-207ENST00000409808 ATP10DQ9P241 1426 aa24.32■■□□□ 1.48
LIMS2-207ENST00000409808 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
LIMS2-207ENST00000409808 HSP90AA1P07900 732 aaKnown RBP24.32■■□□□ 1.48
LIMS2-207ENST00000409808 TTC22Q5TAA0 569 aa24.31■■□□□ 1.48
LIMS2-207ENST00000409808 GZF1Q9H116 711 aaPredicted RBP24.31■■□□□ 1.48
LIMS2-207ENST00000409808 SNRPA1P09661 255 aaKnown RBP24.3■■□□□ 1.48
LIMS2-207ENST00000409808 MYL6BP14649 208 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 CEP85Q6P2H3 762 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 ADCY9O60503 1353 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 AIMP1Q12904 312 aaKnown RBP24.3■■□□□ 1.48
LIMS2-207ENST00000409808 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
LIMS2-207ENST00000409808 RABEP1Q15276 862 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
LIMS2-207ENST00000409808 GSPT1P15170 499 aaKnown RBP24.29■■□□□ 1.48
LIMS2-207ENST00000409808 CLEC17AQ6ZS10 378 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 CERKQ8TCT0 537 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 DNAAF4Q8WXU2 420 aa24.29■■□□□ 1.48
LIMS2-207ENST00000409808 N4BP2Q86UW6 1770 aaPredicted RBP24.28■■□□□ 1.48
LIMS2-207ENST00000409808 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
LIMS2-207ENST00000409808 GLI3P10071 1580 aa24.28■■□□□ 1.48
LIMS2-207ENST00000409808 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
LIMS2-207ENST00000409808 HYPKQ9NX55 129 aa24.28■■□□□ 1.48
LIMS2-207ENST00000409808 EXOC5O00471 708 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 MAP3K2Q9Y2U5 619 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 CCDC9Q9Y3X0 531 aaKnown RBP24.27■■□□□ 1.48
LIMS2-207ENST00000409808 PXDNLA1KZ92 1463 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 WNK3Q9BYP7 1800 aa24.27■■□□□ 1.48
LIMS2-207ENST00000409808 BEND3Q5T5X7 828 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 CASC1Q6TDU7 716 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 SRCIN1Q9C0H9 1055 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 TMOD3Q9NYL9 352 aa24.26■■□□□ 1.47
LIMS2-207ENST00000409808 C8orf37Q96NL8 207 aa24.25■■□□□ 1.47
LIMS2-207ENST00000409808 GNAI2P04899 355 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 GRPEL1Q9HAV7 217 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 SLIT2O94813 1529 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 GOLGA6L22H0YM25 854 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 KSR2Q6VAB6 950 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 PIGBQ92521 554 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 KCPQ6ZWJ8 1503 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 JCADQ9P266 1359 aa24.24■■□□□ 1.47
LIMS2-207ENST00000409808 CD2BP2O95400 341 aaKnown RBP24.23■■□□□ 1.47
LIMS2-207ENST00000409808 PAPPAQ13219 1627 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms