RNA–Protein interactions for RNA: ENST00000409758.1

AP001341.1-201, humanhuman

TSL 3 BASIC

Gene AP001341.1, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001341.1-201ENST00000409758 NFIXQ14938 502 aa16.2■□□□□ 0.18
AP001341.1-201ENST00000409758 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
AP001341.1-201ENST00000409758 C16orf71Q8IYS4 520 aaPredicted RBP16.2■□□□□ 0.18
AP001341.1-201ENST00000409758 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
AP001341.1-201ENST00000409758 NPC1L1Q9UHC9 1359 aa16.2■□□□□ 0.18
AP001341.1-201ENST00000409758 ZNF831Q5JPB2 1677 aa16.2■□□□□ 0.18
AP001341.1-201ENST00000409758 COL15A1P39059 1388 aa16.19■□□□□ 0.18
AP001341.1-201ENST00000409758 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
AP001341.1-201ENST00000409758 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
AP001341.1-201ENST00000409758 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
AP001341.1-201ENST00000409758 KIF3CO14782 793 aa16.18■□□□□ 0.18
AP001341.1-201ENST00000409758 SERPINB2P05120 415 aa16.18■□□□□ 0.18
AP001341.1-201ENST00000409758 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
AP001341.1-201ENST00000409758 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
AP001341.1-201ENST00000409758 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
AP001341.1-201ENST00000409758 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
AP001341.1-201ENST00000409758 NPHP1O15259 732 aa16.17■□□□□ 0.18
AP001341.1-201ENST00000409758 U2AF1L5P0DN76 240 aaPredicted RBP16.17■□□□□ 0.18
AP001341.1-201ENST00000409758 U2AF1Q01081 240 aaKnown RBP eCLIP16.17■□□□□ 0.18
AP001341.1-201ENST00000409758 FMNL2Q96PY5 1086 aa16.17■□□□□ 0.18
AP001341.1-201ENST00000409758 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
AP001341.1-201ENST00000409758 H0YIN7 160 aa16.16■□□□□ 0.18
AP001341.1-201ENST00000409758 TOMM70O94826 608 aa16.16■□□□□ 0.18
AP001341.1-201ENST00000409758 COL5A3P25940 1745 aaPredicted RBP16.16■□□□□ 0.18
AP001341.1-201ENST00000409758 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
AP001341.1-201ENST00000409758 MRC1P22897 1456 aa16.16■□□□□ 0.18
AP001341.1-201ENST00000409758 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
AP001341.1-201ENST00000409758 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
AP001341.1-201ENST00000409758 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
AP001341.1-201ENST00000409758 NMRK2Q9NPI5 230 aa16.15■□□□□ 0.18
AP001341.1-201ENST00000409758 HEG1Q9ULI3 1381 aa16.14■□□□□ 0.17
AP001341.1-201ENST00000409758 NEFMP07197 916 aa16.14■□□□□ 0.17
AP001341.1-201ENST00000409758 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
AP001341.1-201ENST00000409758 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
AP001341.1-201ENST00000409758 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
AP001341.1-201ENST00000409758 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
AP001341.1-201ENST00000409758 TJP1Q07157 1748 aa16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 A1BGP04217 495 aa16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 PPP2R1AP30153 589 aa16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 APLP1P51693 650 aa16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
AP001341.1-201ENST00000409758 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
AP001341.1-201ENST00000409758 SCN11AQ9UI33 1791 aa16.11■□□□□ 0.17
AP001341.1-201ENST00000409758 PDE6BP35913 854 aa16.11■□□□□ 0.17
AP001341.1-201ENST00000409758 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
AP001341.1-201ENST00000409758 ZNF622Q969S3 477 aaKnown RBP eCLIP16.11■□□□□ 0.17
AP001341.1-201ENST00000409758 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
AP001341.1-201ENST00000409758 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
AP001341.1-201ENST00000409758 MCM10Q7L590 875 aa16.1■□□□□ 0.17
AP001341.1-201ENST00000409758 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
AP001341.1-201ENST00000409758 KCNQ3O43525 872 aa16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 LMNB1P20700 586 aa16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 RASSF7Q02833 373 aa16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 DZIP3Q86Y13 1208 aaKnown RBP16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 RBM46Q8TBY0 533 aaKnown RBP16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
AP001341.1-201ENST00000409758 KIF13BQ9NQT8 1826 aa16.08■□□□□ 0.17
AP001341.1-201ENST00000409758 SNRPA1P09661 255 aaKnown RBP16.08■□□□□ 0.16
AP001341.1-201ENST00000409758 ST5P78524 1137 aa16.08■□□□□ 0.16
AP001341.1-201ENST00000409758 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
AP001341.1-201ENST00000409758 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
AP001341.1-201ENST00000409758 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
AP001341.1-201ENST00000409758 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
AP001341.1-201ENST00000409758 CEMIPQ8WUJ3 1361 aa16.07■□□□□ 0.16
AP001341.1-201ENST00000409758 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
AP001341.1-201ENST00000409758 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
AP001341.1-201ENST00000409758 FSTL1Q12841 308 aa16.06■□□□□ 0.16
AP001341.1-201ENST00000409758 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
AP001341.1-201ENST00000409758 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
AP001341.1-201ENST00000409758 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 C21orf2O43822 256 aa16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 TAF7Q15545 349 aaPredicted RBP16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 DPY19L2Q6NUT2 758 aa16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
AP001341.1-201ENST00000409758 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
AP001341.1-201ENST00000409758 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
AP001341.1-201ENST00000409758 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
AP001341.1-201ENST00000409758 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
AP001341.1-201ENST00000409758 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
AP001341.1-201ENST00000409758 ADAMTS7Q9UKP4 1686 aa16.02■□□□□ 0.16
AP001341.1-201ENST00000409758 GLTPD2A6NH11 291 aa16.02■□□□□ 0.16
AP001341.1-201ENST00000409758 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
AP001341.1-201ENST00000409758 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
AP001341.1-201ENST00000409758 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
AP001341.1-201ENST00000409758 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.16
AP001341.1-201ENST00000409758 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 NFKBIEO00221 500 aa16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 ERFEQ4G0M1 354 aa16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 TPTE2Q6XPS3 522 aa16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 PNISRQ8TF01 805 aaKnown RBP16.01■□□□□ 0.15
AP001341.1-201ENST00000409758 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms