RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
ITGA6-203ENST00000409532 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
ITGA6-203ENST00000409532 HTATSF1O43719 755 aaKnown RBP13.64□□□□□ -0.23
ITGA6-203ENST00000409532 TOPAZ1Q8N9V7 1692 aa13.64□□□□□ -0.23
ITGA6-203ENST00000409532 TEFQ10587 303 aa13.64□□□□□ -0.23
ITGA6-203ENST00000409532 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
ITGA6-203ENST00000409532 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
ITGA6-203ENST00000409532 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
ITGA6-203ENST00000409532 PPP1R9BQ96SB3 815 aa13.64□□□□□ -0.23
ITGA6-203ENST00000409532 FMN2Q9NZ56 1722 aa13.63□□□□□ -0.23
ITGA6-203ENST00000409532 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
ITGA6-203ENST00000409532 BRD1O95696 1058 aa13.63□□□□□ -0.23
ITGA6-203ENST00000409532 STAP2Q9UGK3 403 aa13.63□□□□□ -0.23
ITGA6-203ENST00000409532 PA2G4Q9UQ80 394 aaKnown RBP13.63□□□□□ -0.23
ITGA6-203ENST00000409532 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
ITGA6-203ENST00000409532 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
ITGA6-203ENST00000409532 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 PRAMEF22A3QJZ6 481 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
ITGA6-203ENST00000409532 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 MCM2P49736 904 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
ITGA6-203ENST00000409532 PSME1Q06323 249 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
ITGA6-203ENST00000409532 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
ITGA6-203ENST00000409532 CUL4AQ13619 759 aa13.61□□□□□ -0.23
ITGA6-203ENST00000409532 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
ITGA6-203ENST00000409532 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
ITGA6-203ENST00000409532 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
ITGA6-203ENST00000409532 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
ITGA6-203ENST00000409532 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
ITGA6-203ENST00000409532 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
ITGA6-203ENST00000409532 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
ITGA6-203ENST00000409532 HSPA4P34932 840 aa13.6□□□□□ -0.23
ITGA6-203ENST00000409532 ANAPC15P60006 121 aa13.6□□□□□ -0.23
ITGA6-203ENST00000409532 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
ITGA6-203ENST00000409532 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 SNX14Q9Y5W7 946 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 KIF13AQ9H1H9 1805 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 SGSM2O43147 1006 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 AK2P54819 239 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 TCHHQ07283 1943 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
ITGA6-203ENST00000409532 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
ITGA6-203ENST00000409532 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.24
ITGA6-203ENST00000409532 IP6K1Q92551 441 aa13.58□□□□□ -0.24
ITGA6-203ENST00000409532 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.24
ITGA6-203ENST00000409532 POLA2Q14181 598 aa13.58□□□□□ -0.24
ITGA6-203ENST00000409532 SIL1Q9H173 461 aa13.58□□□□□ -0.24
ITGA6-203ENST00000409532 MBD3O95983 291 aa13.57□□□□□ -0.24
ITGA6-203ENST00000409532 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
ITGA6-203ENST00000409532 PTH1RQ03431 593 aa13.57□□□□□ -0.24
ITGA6-203ENST00000409532 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
ITGA6-203ENST00000409532 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
ITGA6-203ENST00000409532 FIBPO43427 364 aa13.57□□□□□ -0.24
ITGA6-203ENST00000409532 LARGE1O95461 756 aa13.57□□□□□ -0.24
ITGA6-203ENST00000409532 PTMAP06454 111 aaKnown RBP13.57□□□□□ -0.24
ITGA6-203ENST00000409532 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
ITGA6-203ENST00000409532 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
ITGA6-203ENST00000409532 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 LSG1Q9H089 658 aaKnown RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 RAD50Q92878 1312 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 NWD1Q149M9 1564 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 KCNJ4P48050 445 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 HSP90AA2PQ14568 343 aaPredicted RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 RUFY3Q7L099 469 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 JARID2Q92833 1246 aaPredicted RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
ITGA6-203ENST00000409532 JAKMIP1Q96N16 626 aaKnown RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.56□□□□□ -0.24
ITGA6-203ENST00000409532 AACSQ86V21 672 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 ADCY9O60503 1353 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
ITGA6-203ENST00000409532 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 CHMP3Q9Y3E7 222 aa13.55□□□□□ -0.24
ITGA6-203ENST00000409532 SYT1P21579 422 aa13.54□□□□□ -0.24
ITGA6-203ENST00000409532 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
ITGA6-203ENST00000409532 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
ITGA6-203ENST00000409532 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
ITGA6-203ENST00000409532 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
ITGA6-203ENST00000409532 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
ITGA6-203ENST00000409532 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
ITGA6-203ENST00000409532 MYL6BP14649 208 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
ITGA6-203ENST00000409532 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms