RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 NARFQ9UHQ1 456 aa24.49■■□□□ 1.51
PTPN18-203ENST00000409022 MYH14Q7Z406 1995 aaKnown RBP24.48■■□□□ 1.51
PTPN18-203ENST00000409022 PNISRQ8TF01 805 aaKnown RBP24.48■■□□□ 1.51
PTPN18-203ENST00000409022 FKBP8Q14318 412 aa24.47■■□□□ 1.51
PTPN18-203ENST00000409022 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
PTPN18-203ENST00000409022 NFE2L2Q16236 605 aa24.47■■□□□ 1.51
PTPN18-203ENST00000409022 USPL1Q5W0Q7 1092 aa24.47■■□□□ 1.51
PTPN18-203ENST00000409022 YBX3P16989 372 aaKnown RBP eCLIP24.46■■□□□ 1.51
PTPN18-203ENST00000409022 PLEKHF1Q96S99 279 aa24.46■■□□□ 1.51
PTPN18-203ENST00000409022 VIRMAQ69YN4 1812 aaKnown RBP24.46■■□□□ 1.51
PTPN18-203ENST00000409022 UBR2Q8IWV8 1755 aa24.46■■□□□ 1.51
PTPN18-203ENST00000409022 SNRPA1P09661 255 aaKnown RBP24.45■■□□□ 1.5
PTPN18-203ENST00000409022 DCTN1Q14203 1278 aa24.45■■□□□ 1.5
PTPN18-203ENST00000409022 IL6STP40189 918 aaPredicted RBP24.44■■□□□ 1.5
PTPN18-203ENST00000409022 EIF5P55010 431 aaKnown RBP24.44■■□□□ 1.5
PTPN18-203ENST00000409022 C10orf71Q711Q0 1435 aa24.44■■□□□ 1.5
PTPN18-203ENST00000409022 WDR43Q15061 677 aaKnown RBP eCLIP24.43■■□□□ 1.5
PTPN18-203ENST00000409022 ZNF330Q9Y3S2 320 aaPredicted RBP24.43■■□□□ 1.5
PTPN18-203ENST00000409022 C4AP0C0L4 1744 aa24.42■■□□□ 1.5
PTPN18-203ENST00000409022 KCNQ3O43525 872 aa24.42■■□□□ 1.5
PTPN18-203ENST00000409022 TM4SF1P30408 202 aa24.41■■□□□ 1.5
PTPN18-203ENST00000409022 LMOD3Q0VAK6 560 aa24.41■■□□□ 1.5
PTPN18-203ENST00000409022 UTRNP46939 3433 aa24.41■■□□□ 1.5
PTPN18-203ENST00000409022 SIPA1L3O60292 1781 aaPredicted RBP24.41■■□□□ 1.5
PTPN18-203ENST00000409022 DDR1Q08345 913 aa24.4■■□□□ 1.5
PTPN18-203ENST00000409022 POLRMTO00411 1230 aaKnown RBP24.39■■□□□ 1.49
PTPN18-203ENST00000409022 ZNF784Q8NCA9 323 aaPredicted RBP24.39■■□□□ 1.49
PTPN18-203ENST00000409022 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
PTPN18-203ENST00000409022 NFIXQ14938 502 aa24.38■■□□□ 1.49
PTPN18-203ENST00000409022 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
PTPN18-203ENST00000409022 A0A0G2JLW4 131 aa24.37■■□□□ 1.49
PTPN18-203ENST00000409022 A1BGP04217 495 aa24.37■■□□□ 1.49
PTPN18-203ENST00000409022 WWC3Q9ULE0 1092 aa24.37■■□□□ 1.49
PTPN18-203ENST00000409022 CHD4Q14839 1912 aa24.36■■□□□ 1.49
PTPN18-203ENST00000409022 DPEP1P16444 411 aa24.36■■□□□ 1.49
PTPN18-203ENST00000409022 RIPK4P57078 832 aa24.36■■□□□ 1.49
PTPN18-203ENST00000409022 BCS1LQ9Y276 419 aa24.36■■□□□ 1.49
PTPN18-203ENST00000409022 USP16Q9Y5T5 823 aa24.36■■□□□ 1.49
PTPN18-203ENST00000409022 PIM2Q9P1W9 311 aa24.35■■□□□ 1.49
PTPN18-203ENST00000409022 TBC1D2BQ9UPU7 963 aa24.35■■□□□ 1.49
PTPN18-203ENST00000409022 SERPINB2P05120 415 aa24.34■■□□□ 1.49
PTPN18-203ENST00000409022 BCL2L12Q9HB09 334 aa24.34■■□□□ 1.49
PTPN18-203ENST00000409022 MIS18AQ9NYP9 233 aa24.34■■□□□ 1.49
PTPN18-203ENST00000409022 DZIP3Q86Y13 1208 aaKnown RBP24.33■■□□□ 1.49
PTPN18-203ENST00000409022 ZNF652Q9Y2D9 606 aa24.33■■□□□ 1.49
PTPN18-203ENST00000409022 GOLGB1Q14789 3259 aaKnown RBP24.33■■□□□ 1.49
PTPN18-203ENST00000409022 TMPOP42166 694 aaKnown RBP24.32■■□□□ 1.48
PTPN18-203ENST00000409022 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
PTPN18-203ENST00000409022 RUNDC1Q96C34 613 aa24.32■■□□□ 1.48
PTPN18-203ENST00000409022 BABAM1Q9NWV8 329 aa24.32■■□□□ 1.48
PTPN18-203ENST00000409022 KIF13BQ9NQT8 1826 aa24.32■■□□□ 1.48
PTPN18-203ENST00000409022 DALRD3Q5D0E6 543 aaKnown RBP24.31■■□□□ 1.48
PTPN18-203ENST00000409022 THUMPD2Q9BTF0 503 aaKnown RBP24.31■■□□□ 1.48
PTPN18-203ENST00000409022 PRAMEF22A3QJZ6 481 aa24.3■■□□□ 1.48
PTPN18-203ENST00000409022 NPHP1O15259 732 aa24.3■■□□□ 1.48
PTPN18-203ENST00000409022 SETDB2Q96T68 719 aa24.3■■□□□ 1.48
PTPN18-203ENST00000409022 TSPYL4Q9UJ04 414 aa24.3■■□□□ 1.48
PTPN18-203ENST00000409022 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
PTPN18-203ENST00000409022 RGL2O15211 777 aa24.29■■□□□ 1.48
PTPN18-203ENST00000409022 EIF4A1P60842 406 aaKnown RBP24.29■■□□□ 1.48
PTPN18-203ENST00000409022 CLEC4GQ6UXB4 293 aa24.29■■□□□ 1.48
PTPN18-203ENST00000409022 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
PTPN18-203ENST00000409022 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
PTPN18-203ENST00000409022 CAMTA2O94983 1202 aa24.28■■□□□ 1.48
PTPN18-203ENST00000409022 TBC1D9BQ66K14 1250 aa24.28■■□□□ 1.48
PTPN18-203ENST00000409022 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
PTPN18-203ENST00000409022 ADAMTS8Q9UP79 889 aa24.27■■□□□ 1.48
PTPN18-203ENST00000409022 KCNA3P22001 575 aa24.26■■□□□ 1.47
PTPN18-203ENST00000409022 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
PTPN18-203ENST00000409022 ARHGAP27Q6ZUM4 889 aa24.26■■□□□ 1.47
PTPN18-203ENST00000409022 ZNF316A6NFI3 1004 aaPredicted RBP24.25■■□□□ 1.47
PTPN18-203ENST00000409022 H0YIN7 160 aa24.25■■□□□ 1.47
PTPN18-203ENST00000409022 CHRNA5P30532 468 aa24.25■■□□□ 1.47
PTPN18-203ENST00000409022 PIP4K2AP48426 406 aaPredicted RBP24.25■■□□□ 1.47
PTPN18-203ENST00000409022 PDE6BP35913 854 aa24.24■■□□□ 1.47
PTPN18-203ENST00000409022 ST5P78524 1137 aa24.24■■□□□ 1.47
PTPN18-203ENST00000409022 CNBD1Q8NA66 436 aa24.24■■□□□ 1.47
PTPN18-203ENST00000409022 RRP7AQ9Y3A4 280 aaKnown RBP24.24■■□□□ 1.47
PTPN18-203ENST00000409022 NBPF26B4DH59 902 aa24.23■■□□□ 1.47
PTPN18-203ENST00000409022 NBPF10Q6P3W6 841 aaKnown RBP24.23■■□□□ 1.47
PTPN18-203ENST00000409022 NBPF15Q8N660 670 aa24.23■■□□□ 1.47
PTPN18-203ENST00000409022 BRIP1Q9BX63 1249 aa24.23■■□□□ 1.47
PTPN18-203ENST00000409022 ERBB4Q15303 1308 aa24.23■■□□□ 1.47
PTPN18-203ENST00000409022 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
PTPN18-203ENST00000409022 SCN7AQ01118 1682 aa24.22■■□□□ 1.47
PTPN18-203ENST00000409022 C2CD5Q86YS7 1000 aa24.22■■□□□ 1.47
PTPN18-203ENST00000409022 N4BP2Q86UW6 1770 aaPredicted RBP24.21■■□□□ 1.47
PTPN18-203ENST00000409022 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
PTPN18-203ENST00000409022 ATP10DQ9P241 1426 aa24.21■■□□□ 1.47
PTPN18-203ENST00000409022 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
PTPN18-203ENST00000409022 PRR5LQ6MZQ0 368 aa24.2■■□□□ 1.46
PTPN18-203ENST00000409022 NBPF5PQ86XG9 351 aaPredicted RBP24.2■■□□□ 1.46
PTPN18-203ENST00000409022 TTLL6Q8N841 843 aa24.2■■□□□ 1.46
PTPN18-203ENST00000409022 KDM3BQ7LBC6 1761 aa24.19■■□□□ 1.46
PTPN18-203ENST00000409022 GPBP1L1Q9HC44 474 aaPredicted RBP24.19■■□□□ 1.46
PTPN18-203ENST00000409022 NRXN2Q9P2S2 1712 aa24.18■■□□□ 1.46
PTPN18-203ENST00000409022 ADCY9O60503 1353 aa24.18■■□□□ 1.46
PTPN18-203ENST00000409022 ERVV-1B6SEH8 477 aa24.18■■□□□ 1.46
PTPN18-203ENST00000409022 CALD1Q05682 793 aaKnown RBP24.18■■□□□ 1.46
PTPN18-203ENST00000409022 TPTE2Q6XPS3 522 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms