RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 ZNF790Q6PG37 636 aa30.11■■■□□ 2.41
KDELR3-202ENST00000409006 COL15A1P39059 1388 aa30.1■■■□□ 2.41
KDELR3-202ENST00000409006 DPEP1P16444 411 aa30.09■■■□□ 2.41
KDELR3-202ENST00000409006 HEG1Q9ULI3 1381 aa30.08■■■□□ 2.41
KDELR3-202ENST00000409006 KCNQ3O43525 872 aa30.08■■■□□ 2.41
KDELR3-202ENST00000409006 ZPR1O75312 459 aa30.08■■■□□ 2.41
KDELR3-202ENST00000409006 FCHSD2O94868 740 aa30.08■■■□□ 2.41
KDELR3-202ENST00000409006 TM4SF1P30408 202 aa30.08■■■□□ 2.41
KDELR3-202ENST00000409006 DLG5Q8TDM6 1919 aa30.08■■■□□ 2.41
KDELR3-202ENST00000409006 CANXP27824 592 aaKnown RBP30.07■■■□□ 2.4
KDELR3-202ENST00000409006 NARFQ9UHQ1 456 aa30.07■■■□□ 2.4
KDELR3-202ENST00000409006 BCL2L12Q9HB09 334 aa30.06■■■□□ 2.4
KDELR3-202ENST00000409006 POLRMTO00411 1230 aaKnown RBP30.05■■■□□ 2.4
KDELR3-202ENST00000409006 ATP10DQ9P241 1426 aa30.05■■■□□ 2.4
KDELR3-202ENST00000409006 KCNA3P22001 575 aa30.04■■■□□ 2.4
KDELR3-202ENST00000409006 MCM10Q7L590 875 aa30.04■■■□□ 2.4
KDELR3-202ENST00000409006 BCS1LQ9Y276 419 aa30.04■■■□□ 2.4
KDELR3-202ENST00000409006 ADCY9O60503 1353 aa30.03■■■□□ 2.4
KDELR3-202ENST00000409006 ARFGEF1Q9Y6D6 1849 aa30.03■■■□□ 2.4
KDELR3-202ENST00000409006 NRXN2Q9P2S2 1712 aa30.03■■■□□ 2.4
KDELR3-202ENST00000409006 BTBD11A6QL63 1104 aa30.03■■■□□ 2.4
KDELR3-202ENST00000409006 STARD3NLO95772 234 aa30.03■■■□□ 2.4
KDELR3-202ENST00000409006 EIF5P55010 431 aaKnown RBP30.02■■■□□ 2.4
KDELR3-202ENST00000409006 DCTN1Q14203 1278 aa30.02■■■□□ 2.4
KDELR3-202ENST00000409006 NFIXQ14938 502 aa30.01■■■□□ 2.39
KDELR3-202ENST00000409006 FMNL2Q96PY5 1086 aa30.01■■■□□ 2.39
KDELR3-202ENST00000409006 C1QTNF8P60827 252 aa29.99■■■□□ 2.39
KDELR3-202ENST00000409006 RTF1Q92541 710 aaKnown RBP29.98■■■□□ 2.39
KDELR3-202ENST00000409006 TEX13AQ9BXU3 409 aaPredicted RBP29.98■■■□□ 2.39
KDELR3-202ENST00000409006 SCN7AQ01118 1682 aa29.98■■■□□ 2.39
KDELR3-202ENST00000409006 GIGYF1O75420 1035 aaPredicted RBP29.97■■■□□ 2.39
KDELR3-202ENST00000409006 A1BGP04217 495 aa29.97■■■□□ 2.39
KDELR3-202ENST00000409006 CHRNA5P30532 468 aa29.97■■■□□ 2.39
KDELR3-202ENST00000409006 PRAMEF22A3QJZ6 481 aa29.96■■■□□ 2.39
KDELR3-202ENST00000409006 USP16Q9Y5T5 823 aa29.95■■■□□ 2.39
KDELR3-202ENST00000409006 PLEKHF1Q96S99 279 aa29.94■■■□□ 2.38
KDELR3-202ENST00000409006 ZNF330Q9Y3S2 320 aaPredicted RBP29.94■■■□□ 2.38
KDELR3-202ENST00000409006 HTATSF1O43719 755 aaKnown RBP29.93■■■□□ 2.38
KDELR3-202ENST00000409006 SERPINB2P05120 415 aa29.93■■■□□ 2.38
KDELR3-202ENST00000409006 ARHGAP27Q6ZUM4 889 aa29.93■■■□□ 2.38
KDELR3-202ENST00000409006 ZNF526Q8TF50 670 aaPredicted RBP29.93■■■□□ 2.38
KDELR3-202ENST00000409006 PIM2Q9P1W9 311 aa29.93■■■□□ 2.38
KDELR3-202ENST00000409006 TBC1D2BQ9UPU7 963 aa29.93■■■□□ 2.38
KDELR3-202ENST00000409006 DLEC1Q9Y238 1755 aa29.92■■■□□ 2.38
KDELR3-202ENST00000409006 A0A087WZG4 1122 aa29.92■■■□□ 2.38
KDELR3-202ENST00000409006 IL6STP40189 918 aaPredicted RBP29.92■■■□□ 2.38
KDELR3-202ENST00000409006 BICDL1Q6ZP65 573 aa29.92■■■□□ 2.38
KDELR3-202ENST00000409006 BCORQ6W2J9 1755 aa29.91■■■□□ 2.38
KDELR3-202ENST00000409006 PIP4K2AP48426 406 aaPredicted RBP29.91■■■□□ 2.38
KDELR3-202ENST00000409006 ANKRD31Q8N7Z5 1873 aa29.91■■■□□ 2.38
KDELR3-202ENST00000409006 DDX10Q13206 875 aaKnown RBP29.9■■■□□ 2.38
KDELR3-202ENST00000409006 TBC1D9BQ66K14 1250 aa29.9■■■□□ 2.38
KDELR3-202ENST00000409006 MIS18AQ9NYP9 233 aa29.9■■■□□ 2.38
KDELR3-202ENST00000409006 CARMIL3Q8ND23 1372 aa29.9■■■□□ 2.38
KDELR3-202ENST00000409006 GPBP1L1Q9HC44 474 aaPredicted RBP29.89■■■□□ 2.38
KDELR3-202ENST00000409006 KDM3BQ7LBC6 1761 aa29.89■■■□□ 2.38
KDELR3-202ENST00000409006 DALRD3Q5D0E6 543 aaKnown RBP29.88■■■□□ 2.37
KDELR3-202ENST00000409006 SBF1O95248 1867 aa29.88■■■□□ 2.37
KDELR3-202ENST00000409006 TAF7Q15545 349 aaPredicted RBP29.87■■■□□ 2.37
KDELR3-202ENST00000409006 SNRPA1P09661 255 aaKnown RBP29.86■■■□□ 2.37
KDELR3-202ENST00000409006 CAMTA2O94983 1202 aa29.85■■■□□ 2.37
KDELR3-202ENST00000409006 RALBP1Q15311 655 aa29.85■■■□□ 2.37
KDELR3-202ENST00000409006 LAMB4A4D0S4 1761 aa29.85■■■□□ 2.37
KDELR3-202ENST00000409006 NEFMP07197 916 aa29.84■■■□□ 2.37
KDELR3-202ENST00000409006 NFE2L2Q16236 605 aa29.84■■■□□ 2.37
KDELR3-202ENST00000409006 THUMPD2Q9BTF0 503 aaKnown RBP29.84■■■□□ 2.37
KDELR3-202ENST00000409006 SENP3-EIF4A1A0A087X0R7 540 aa29.83■■■□□ 2.37
KDELR3-202ENST00000409006 NBPF26B4DH59 902 aa29.82■■■□□ 2.36
KDELR3-202ENST00000409006 NBPF10Q6P3W6 841 aaKnown RBP29.82■■■□□ 2.36
KDELR3-202ENST00000409006 CCDC24Q8N4L8 307 aa29.82■■■□□ 2.36
KDELR3-202ENST00000409006 NBPF15Q8N660 670 aa29.82■■■□□ 2.36
KDELR3-202ENST00000409006 DZIP3Q86Y13 1208 aaKnown RBP29.81■■■□□ 2.36
KDELR3-202ENST00000409006 COL11A2P13942 1736 aaPredicted RBP29.81■■■□□ 2.36
KDELR3-202ENST00000409006 CCDC88AQ3V6T2 1871 aa29.79■■■□□ 2.36
KDELR3-202ENST00000409006 PRR5LQ6MZQ0 368 aa29.79■■■□□ 2.36
KDELR3-202ENST00000409006 NPM2Q86SE8 214 aaKnown RBP29.79■■■□□ 2.36
KDELR3-202ENST00000409006 C2CD5Q86YS7 1000 aa29.79■■■□□ 2.36
KDELR3-202ENST00000409006 C9orf131Q5VYM1 1079 aa29.78■■■□□ 2.36
KDELR3-202ENST00000409006 MAPK8IP3Q9UPT6 1336 aa29.77■■■□□ 2.36
KDELR3-202ENST00000409006 CACNA1SQ13698 1873 aa29.76■■■□□ 2.36
KDELR3-202ENST00000409006 KIF3CO14782 793 aa29.76■■■□□ 2.35
KDELR3-202ENST00000409006 SETDB2Q96T68 719 aa29.76■■■□□ 2.35
KDELR3-202ENST00000409006 PNNQ9H307 717 aaKnown RBP29.76■■■□□ 2.35
KDELR3-202ENST00000409006 MYBBP1AQ9BQG0 1328 aaKnown RBP29.74■■■□□ 2.35
KDELR3-202ENST00000409006 H0YIN7 160 aa29.74■■■□□ 2.35
KDELR3-202ENST00000409006 EIF4A1P60842 406 aaKnown RBP29.73■■■□□ 2.35
KDELR3-202ENST00000409006 TTLL6Q8N841 843 aa29.73■■■□□ 2.35
KDELR3-202ENST00000409006 PNISRQ8TF01 805 aaKnown RBP29.73■■■□□ 2.35
KDELR3-202ENST00000409006 BRIP1Q9BX63 1249 aa29.73■■■□□ 2.35
KDELR3-202ENST00000409006 RASSF7Q02833 373 aa29.72■■■□□ 2.35
KDELR3-202ENST00000409006 RNF181Q9P0P0 153 aa29.71■■■□□ 2.35
KDELR3-202ENST00000409006 NUP98P52948 1817 aa29.71■■■□□ 2.35
KDELR3-202ENST00000409006 RIPK4P57078 832 aa29.7■■■□□ 2.35
KDELR3-202ENST00000409006 CLEC4GQ6UXB4 293 aa29.7■■■□□ 2.35
KDELR3-202ENST00000409006 CNBD1Q8NA66 436 aa29.7■■■□□ 2.35
KDELR3-202ENST00000409006 PDE6BP35913 854 aa29.69■■■□□ 2.34
KDELR3-202ENST00000409006 PRELPP51888 382 aa29.69■■■□□ 2.34
KDELR3-202ENST00000409006 ZNF622Q969S3 477 aaKnown RBP eCLIP29.69■■■□□ 2.34
KDELR3-202ENST00000409006 SLX4Q8IY92 1834 aa29.68■■■□□ 2.34
KDELR3-202ENST00000409006 HLFQ16534 295 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms