RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 LMAN1P49257 510 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 PTPRCP08575 1304 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
RNF43-201ENST00000407977 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 TBC1D9Q6ZT07 1266 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 ZSCAN16Q9H4T2 348 aaPredicted RBP15.01□□□□□ -0.01
RNF43-201ENST00000407977 ZKSCAN5Q9Y2L8 839 aa15□□□□□ -0.01
RNF43-201ENST00000407977 STK11IPQ8N1F8 1099 aa15□□□□□ -0.01
RNF43-201ENST00000407977 BTBD11A6QL63 1104 aa15□□□□□ -0.01
RNF43-201ENST00000407977 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
RNF43-201ENST00000407977 SPECC1Q5M775 1068 aa15□□□□□ -0.01
RNF43-201ENST00000407977 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
RNF43-201ENST00000407977 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
RNF43-201ENST00000407977 ZHX1Q9UKY1 873 aaPredicted RBP15□□□□□ -0.01
RNF43-201ENST00000407977 PAF1Q8N7H5 531 aa15□□□□□ -0.01
RNF43-201ENST00000407977 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
RNF43-201ENST00000407977 CCDC113Q9H0I3 377 aa15□□□□□ -0.01
RNF43-201ENST00000407977 ARFGAP3Q9NP61 516 aa15□□□□□ -0.01
RNF43-201ENST00000407977 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
RNF43-201ENST00000407977 AFAP1Q8N556 730 aa14.99□□□□□ -0.01
RNF43-201ENST00000407977 HMG20BQ9P0W2 317 aa14.99□□□□□ -0.01
RNF43-201ENST00000407977 XRCC6P12956 609 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■□□□□ 8.9
RNF43-201ENST00000407977 CKAP4Q07065 602 aaKnown RBP14.99□□□□□ -0.01
RNF43-201ENST00000407977 NAIPQ13075 1403 aa14.99□□□□□ -0.01
RNF43-201ENST00000407977 DNAAF4Q8WXU2 420 aa14.99□□□□□ -0.01
RNF43-201ENST00000407977 EVI5LQ96CN4 794 aa14.99□□□□□ -0.01
RNF43-201ENST00000407977 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 GJB2P29033 226 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 FAM114A1Q8IWE2 563 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 SNX21Q969T3 373 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 HDAC1Q13547 482 aaPredicted RBP14.98□□□□□ -0.01
RNF43-201ENST00000407977 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 IDH1O75874 414 aaKnown RBP14.98□□□□□ -0.01
RNF43-201ENST00000407977 STAMBPO95630 424 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
RNF43-201ENST00000407977 MAPK8IP2Q13387 824 aaPredicted RBP14.98□□□□□ -0.01
RNF43-201ENST00000407977 GNG11P61952 73 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 FAM200AQ8TCP9 573 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 GSTTP1A0A1W2PQM5 241 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 SMARCA5O60264 1052 aaPredicted RBP14.97□□□□□ -0.01
RNF43-201ENST00000407977 NCOA1Q15788 1441 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 TRIM27P14373 513 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 RNF41Q9H4P4 317 aaPredicted RBP14.97□□□□□ -0.01
RNF43-201ENST00000407977 GOLIM4O00461 696 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 MYL6BP14649 208 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 ANAPC15P60006 121 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 IL16Q14005 1332 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
RNF43-201ENST00000407977 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
RNF43-201ENST00000407977 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 MNAT1P51948 309 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 CEP112Q8N8E3 955 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 CCDC12Q8WUD4 166 aaPredicted RBP14.96□□□□□ -0.01
RNF43-201ENST00000407977 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 HLTFQ14527 1009 aaKnown RBP eCLIP14.96□□□□□ -0.01
RNF43-201ENST00000407977 CCDC102BQ68D86 513 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 TUBBP07437 444 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 ZSCAN22P10073 491 aaPredicted RBP14.96□□□□□ -0.01
RNF43-201ENST00000407977 ESCO1Q5FWF5 840 aa14.96□□□□□ -0.01
RNF43-201ENST00000407977 HCLS1P14317 486 aaPredicted RBP14.96□□□□□ -0.02
RNF43-201ENST00000407977 TTC22Q5TAA0 569 aa14.96□□□□□ -0.02
RNF43-201ENST00000407977 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.02
RNF43-201ENST00000407977 ZNF76P36508 570 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 AMPD3Q01432 767 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 TDRD12Q587J7 1177 aaKnown RBP14.95□□□□□ -0.02
RNF43-201ENST00000407977 BBXQ8WY36 941 aaPredicted RBP14.95□□□□□ -0.02
RNF43-201ENST00000407977 DDX12PQ92771 950 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 ECHDC1Q9NTX5 307 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 IFIT1P09914 478 aaKnown RBP14.95□□□□□ -0.02
RNF43-201ENST00000407977 SSRP1Q08945 709 aaKnown RBP14.95□□□□□ -0.02
RNF43-201ENST00000407977 TMEM266Q2M3C6 531 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 TXNDC2Q86VQ3 553 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 SLC12A7Q9Y666 1083 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 IFI16Q16666 785 aaKnown RBP14.95□□□□□ -0.02
RNF43-201ENST00000407977 NAPBQ9H115 298 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 BOLA2Q9H3K6 86 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 HOOK3Q86VS8 718 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 TRERF1Q96PN7 1200 aa14.95□□□□□ -0.02
RNF43-201ENST00000407977 HSF2BPO75031 334 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 SSR1P43307 286 aaKnown RBP14.94□□□□□ -0.02
RNF43-201ENST00000407977 TICAM2Q86XR7 235 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 CTAGE1Q96RT6 745 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 CCDC94Q9BW85 323 aaPredicted RBP14.94□□□□□ -0.02
RNF43-201ENST00000407977 NSD2O96028 1365 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 ZNF213O14771 459 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 HSPA4P34932 840 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 IGHMBP2P38935 993 aaKnown RBP14.94□□□□□ -0.02
RNF43-201ENST00000407977 DNAI2Q9GZS0 605 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 SUPT6HQ7KZ85 1726 aaKnown RBP14.94□□□□□ -0.02
RNF43-201ENST00000407977 SLU7O95391 586 aaKnown RBP14.94□□□□□ -0.02
RNF43-201ENST00000407977 IQCA1Q86XH1 822 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 CPLX3Q8WVH0 158 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 FEZ1Q99689 392 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 GRIN2BQ13224 1484 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 SKILP12757 684 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 NF2P35240 595 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms