RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 RASSF7Q02833 373 aa28.53■■■□□ 2.16
RHBDD3-202ENST00000406335 NFIXQ14938 502 aa28.53■■■□□ 2.16
RHBDD3-202ENST00000406335 SMC1BQ8NDV3 1235 aa28.53■■■□□ 2.16
RHBDD3-202ENST00000406335 SERPINB2P05120 415 aa28.52■■■□□ 2.16
RHBDD3-202ENST00000406335 CANXP27824 592 aaKnown RBP28.51■■■□□ 2.15
RHBDD3-202ENST00000406335 BICDL1Q6ZP65 573 aa28.5■■■□□ 2.15
RHBDD3-202ENST00000406335 C2CD5Q86YS7 1000 aa28.5■■■□□ 2.15
RHBDD3-202ENST00000406335 TTLL6Q8N841 843 aa28.5■■■□□ 2.15
RHBDD3-202ENST00000406335 ZBTB1Q9Y2K1 713 aa28.5■■■□□ 2.15
RHBDD3-202ENST00000406335 MYH14Q7Z406 1995 aaKnown RBP28.5■■■□□ 2.15
RHBDD3-202ENST00000406335 H0YIN7 160 aa28.49■■■□□ 2.15
RHBDD3-202ENST00000406335 LMNB1P20700 586 aa28.49■■■□□ 2.15
RHBDD3-202ENST00000406335 TTC5Q8N0Z6 440 aa28.49■■■□□ 2.15
RHBDD3-202ENST00000406335 COL15A1P39059 1388 aa28.49■■■□□ 2.15
RHBDD3-202ENST00000406335 STARD3NLO95772 234 aa28.46■■■□□ 2.15
RHBDD3-202ENST00000406335 VEGFAP15692 232 aaPredicted RBP28.46■■■□□ 2.15
RHBDD3-202ENST00000406335 MTHFSDQ2M296 383 aaKnown RBP28.46■■■□□ 2.15
RHBDD3-202ENST00000406335 AMER1Q5JTC6 1135 aaPredicted RBP28.45■■■□□ 2.14
RHBDD3-202ENST00000406335 VSIG10Q8N0Z9 540 aa28.45■■■□□ 2.14
RHBDD3-202ENST00000406335 ZNF330Q9Y3S2 320 aaPredicted RBP28.45■■■□□ 2.14
RHBDD3-202ENST00000406335 ZC3H4Q9UPT8 1303 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-202ENST00000406335 A0A087WZG4 1122 aa28.44■■■□□ 2.14
RHBDD3-202ENST00000406335 GLTPD2A6NH11 291 aa28.44■■■□□ 2.14
RHBDD3-202ENST00000406335 DIAPH1O60610 1272 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-202ENST00000406335 NPM2Q86SE8 214 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-202ENST00000406335 ZNF622Q969S3 477 aaKnown RBP eCLIP28.44■■■□□ 2.14
RHBDD3-202ENST00000406335 TJP1Q07157 1748 aa28.43■■■□□ 2.14
RHBDD3-202ENST00000406335 JMYQ8N9B5 988 aa28.43■■■□□ 2.14
RHBDD3-202ENST00000406335 ARFGEF1Q9Y6D6 1849 aa28.43■■■□□ 2.14
RHBDD3-202ENST00000406335 BRCA1P38398 1863 aaKnown RBP28.42■■■□□ 2.14
RHBDD3-202ENST00000406335 NPHP1O15259 732 aa28.42■■■□□ 2.14
RHBDD3-202ENST00000406335 COL13A1Q5TAT6 717 aaPredicted RBP28.42■■■□□ 2.14
RHBDD3-202ENST00000406335 DPY19L2Q6NUT2 758 aa28.42■■■□□ 2.14
RHBDD3-202ENST00000406335 BCL2L12Q9HB09 334 aa28.42■■■□□ 2.14
RHBDD3-202ENST00000406335 ZNF219Q9P2Y4 722 aaPredicted RBP28.42■■■□□ 2.14
RHBDD3-202ENST00000406335 PER1O15534 1290 aaPredicted RBP28.41■■■□□ 2.14
RHBDD3-202ENST00000406335 CAPN15O75808 1086 aa28.41■■■□□ 2.14
RHBDD3-202ENST00000406335 WDR90Q96KV7 1748 aa28.4■■■□□ 2.14
RHBDD3-202ENST00000406335 CNGB1Q14028 1251 aaPredicted RBP28.4■■■□□ 2.14
RHBDD3-202ENST00000406335 CC2D1BQ5T0F9 858 aaKnown RBP28.4■■■□□ 2.14
RHBDD3-202ENST00000406335 TEFQ10587 303 aa28.39■■■□□ 2.14
RHBDD3-202ENST00000406335 U2SURPO15042 1029 aaKnown RBP28.37■■■□□ 2.13
RHBDD3-202ENST00000406335 PDE6BP35913 854 aa28.37■■■□□ 2.13
RHBDD3-202ENST00000406335 TNS4Q8IZW8 715 aa28.37■■■□□ 2.13
RHBDD3-202ENST00000406335 TEX13AQ9BXU3 409 aaPredicted RBP28.36■■■□□ 2.13
RHBDD3-202ENST00000406335 TBC1D2BQ9UPU7 963 aa28.36■■■□□ 2.13
RHBDD3-202ENST00000406335 SCN11AQ9UI33 1791 aa28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 C21orf2O43822 256 aa28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 PRELPP51888 382 aa28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 EIF5P55010 431 aaKnown RBP28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 TBC1D9BQ66K14 1250 aa28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 CCDC24Q8N4L8 307 aa28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 PDZRN3Q9UPQ7 1066 aa28.35■■■□□ 2.13
RHBDD3-202ENST00000406335 ERFEQ4G0M1 354 aa28.34■■■□□ 2.13
RHBDD3-202ENST00000406335 BRIP1Q9BX63 1249 aa28.33■■■□□ 2.13
RHBDD3-202ENST00000406335 GNAT3A8MTJ3 354 aa28.32■■■□□ 2.12
RHBDD3-202ENST00000406335 NFKBIEO00221 500 aa28.32■■■□□ 2.12
RHBDD3-202ENST00000406335 ZNF496Q96IT1 587 aaPredicted RBP28.32■■■□□ 2.12
RHBDD3-202ENST00000406335 CARMIL3Q8ND23 1372 aa28.32■■■□□ 2.12
RHBDD3-202ENST00000406335 TNRC6CQ9HCJ0 1690 aaKnown RBP28.32■■■□□ 2.12
RHBDD3-202ENST00000406335 ZNF790Q6PG37 636 aa28.31■■■□□ 2.12
RHBDD3-202ENST00000406335 GAS2L2Q8NHY3 880 aa28.31■■■□□ 2.12
RHBDD3-202ENST00000406335 SETDB2Q96T68 719 aa28.31■■■□□ 2.12
RHBDD3-202ENST00000406335 MRC1P22897 1456 aa28.31■■■□□ 2.12
RHBDD3-202ENST00000406335 ADAMTS7Q9UKP4 1686 aa28.3■■■□□ 2.12
RHBDD3-202ENST00000406335 IL6STP40189 918 aaPredicted RBP28.28■■■□□ 2.12
RHBDD3-202ENST00000406335 ST5P78524 1137 aa28.28■■■□□ 2.12
RHBDD3-202ENST00000406335 PRR5LQ6MZQ0 368 aa28.28■■■□□ 2.12
RHBDD3-202ENST00000406335 FMNL2Q96PY5 1086 aa28.28■■■□□ 2.12
RHBDD3-202ENST00000406335 HEG1Q9ULI3 1381 aa28.27■■■□□ 2.12
RHBDD3-202ENST00000406335 HSPA1AP0DMV8 641 aaKnown RBP28.27■■■□□ 2.12
RHBDD3-202ENST00000406335 HSPA1BP0DMV9 641 aaKnown RBP28.27■■■□□ 2.12
RHBDD3-202ENST00000406335 CNBD1Q8NA66 436 aa28.27■■■□□ 2.12
RHBDD3-202ENST00000406335 IL17REQ8NFR9 667 aa28.27■■■□□ 2.12
RHBDD3-202ENST00000406335 CNKSR1Q969H4 720 aa28.26■■■□□ 2.11
RHBDD3-202ENST00000406335 TAOK3Q9H2K8 898 aa28.26■■■□□ 2.11
RHBDD3-202ENST00000406335 VIRMAQ69YN4 1812 aaKnown RBP28.25■■■□□ 2.11
RHBDD3-202ENST00000406335 A1BGP04217 495 aa28.25■■■□□ 2.11
RHBDD3-202ENST00000406335 NPC1L1Q9UHC9 1359 aa28.24■■■□□ 2.11
RHBDD3-202ENST00000406335 SBF1O95248 1867 aa28.24■■■□□ 2.11
RHBDD3-202ENST00000406335 BTBD11A6QL63 1104 aa28.24■■■□□ 2.11
RHBDD3-202ENST00000406335 POTECB2RU33 542 aa28.23■■■□□ 2.11
RHBDD3-202ENST00000406335 AFDNP55196 1824 aaKnown RBP28.22■■■□□ 2.11
RHBDD3-202ENST00000406335 SOGA3Q5TF21 947 aa28.22■■■□□ 2.11
RHBDD3-202ENST00000406335 DZIP3Q86Y13 1208 aaKnown RBP28.22■■■□□ 2.11
RHBDD3-202ENST00000406335 CHADLQ6NUI6 762 aa28.21■■■□□ 2.11
RHBDD3-202ENST00000406335 NRXN2Q9P2S2 1712 aa28.21■■■□□ 2.11
RHBDD3-202ENST00000406335 DDNO94850 711 aaPredicted RBP28.2■■■□□ 2.1
RHBDD3-202ENST00000406335 STYK1Q6J9G0 422 aa28.2■■■□□ 2.1
RHBDD3-202ENST00000406335 MASTLQ96GX5 879 aa28.2■■■□□ 2.1
RHBDD3-202ENST00000406335 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
RHBDD3-202ENST00000406335 CAMTA2O94983 1202 aa28.18■■■□□ 2.1
RHBDD3-202ENST00000406335 NBPF5PQ86XG9 351 aaPredicted RBP28.18■■■□□ 2.1
RHBDD3-202ENST00000406335 MKRN1Q9UHC7 482 aaKnown RBP28.18■■■□□ 2.1
RHBDD3-202ENST00000406335 SRGNP10124 158 aa28.17■■■□□ 2.1
RHBDD3-202ENST00000406335 CFAP53Q96M91 514 aa28.17■■■□□ 2.1
RHBDD3-202ENST00000406335 KCNQ3O43525 872 aa28.16■■■□□ 2.1
RHBDD3-202ENST00000406335 PIP4K2AP48426 406 aaPredicted RBP28.16■■■□□ 2.1
RHBDD3-202ENST00000406335 CREBZFQ9NS37 354 aa28.16■■■□□ 2.1
RHBDD3-202ENST00000406335 ZNF652Q9Y2D9 606 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms