RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SERTAD1Q9UHV2 236 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 A6NJY4 79 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SIAH2O43255 324 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 LILRA1O75019 489 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SMPD1P17405 629 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 ITGAEP38570 1179 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SMTNP53814 917 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 ARHGAP4P98171 946 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 FGD1P98174 961 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 RGL4Q8IZJ4 473 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SLC16A10Q8TF71 515 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 CHMP7Q8WUX9 453 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 MRRFQ96E11 262 aaKnown RBP7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 CITED4Q96RK1 184 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 FOXK2Q01167 660 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 NAA30Q147X3 362 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 MTFR1Q15390 333 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 SLC9A9Q8IVB4 645 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 CDK2AP1O14519 115 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 TLR1Q15399 786 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 PURBQ96QR8 312 aaKnown RBP7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 C2orf49Q9BVC5 232 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 WASF2Q9Y6W5 498 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 UNCXA6NJT0 531 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ADH1AP07327 375 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 MTMR3Q13615 1198 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ARHGEF10LQ9HCE6 1279 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 VAMP1P23763 118 aa7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 GTF2E1P29083 439 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 EAPPQ56P03 285 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 NOM1Q5C9Z4 860 aaKnown RBP7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 CAPN12Q6ZSI9 719 aa7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 STIM2Q9P246 746 aa7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 A0A1W2PRU2 124 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 NR3C2P08235 984 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 MPSTP25325 297 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 HIRAP54198 1017 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 CLN3Q13286 438 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 PDE3BQ13370 1112 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 AAMPQ13685 434 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 ECM1Q16610 540 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 CNKSR1Q969H4 720 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 MYO19Q96H55 970 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 SERTM1A2A2V5 107 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 J3QL48 77 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 STAU1O95793 577 aaKnown RBP7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 ALDH1A1P00352 501 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 ADD1P35611 737 aaKnown RBP7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 NNTQ13423 1086 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 FBXO33Q7Z6M2 555 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 DMRTB1Q96MA1 342 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 NXF1Q9UBU9 619 aaKnown RBP7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 IL2RAP01589 272 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 GMPRP36959 345 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 POTEAQ6S8J7 498 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 IRF7Q92985 503 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 KIAA1522Q9P206 1035 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 USP5P45974 858 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 EIF1AXP47813 144 aaKnown RBP7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 TEAD4Q15561 434 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 NPAS3Q8IXF0 933 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 HPS1Q92902 700 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 ZNF232Q9UNY5 417 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 TCF3P15923 654 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 PTGIRP43119 386 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 HIF1AQ16665 826 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 RTN1Q16799 776 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 TBCELQ5QJ74 424 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 COX20Q5RI15 118 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 Q6ZVU0 165 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 TMC7Q7Z402 723 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 SAP130Q9H0E3 1048 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 IQSEC3Q9UPP2 1182 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 HRH3Q9Y5N1 445 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 PCSK2P16519 638 aa7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 SUZ12Q15022 739 aaKnown RBP7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 MEN1O00255 615 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 EML1O00423 815 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 TNFRSF10BO14763 440 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 TREHO43280 583 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 ZIC2O95409 532 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 GPC1P35052 558 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms