RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SERTAD1Q9UHV2 236 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 A6NJY4 79 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SIAH2O43255 324 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 LILRA1O75019 489 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SMPD1P17405 629 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 ITGAEP38570 1179 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SMTNP53814 917 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 ARHGAP4P98171 946 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 FGD1P98174 961 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 RGL4Q8IZJ4 473 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SLC16A10Q8TF71 515 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 CHMP7Q8WUX9 453 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 MRRFQ96E11 262 aaKnown RBP7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 CITED4Q96RK1 184 aa7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P18-201ENST00000406327 FOXK2Q01167 660 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 NAA30Q147X3 362 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 MTFR1Q15390 333 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 SLC9A9Q8IVB4 645 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
HMGB3P18-201ENST00000406327 CDK2AP1O14519 115 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 TLR1Q15399 786 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 PURBQ96QR8 312 aaKnown RBP7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 C2orf49Q9BVC5 232 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 WASF2Q9Y6W5 498 aa7.69□□□□□ -1.18
HMGB3P18-201ENST00000406327 UNCXA6NJT0 531 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ADH1AP07327 375 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 MTMR3Q13615 1198 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 ARHGEF10LQ9HCE6 1279 aa7.68□□□□□ -1.18
HMGB3P18-201ENST00000406327 VAMP1P23763 118 aa7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 GTF2E1P29083 439 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 EAPPQ56P03 285 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 NOM1Q5C9Z4 860 aaKnown RBP7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 CAPN12Q6ZSI9 719 aa7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 STIM2Q9P246 746 aa7.67□□□□□ -1.18
HMGB3P18-201ENST00000406327 A0A1W2PRU2 124 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 NR3C2P08235 984 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 MPSTP25325 297 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 HIRAP54198 1017 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 CLN3Q13286 438 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 PDE3BQ13370 1112 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 AAMPQ13685 434 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 ECM1Q16610 540 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 CNKSR1Q969H4 720 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 MYO19Q96H55 970 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
HMGB3P18-201ENST00000406327 SERTM1A2A2V5 107 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 J3QL48 77 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 STAU1O95793 577 aaKnown RBP7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 ALDH1A1P00352 501 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 ADD1P35611 737 aaKnown RBP7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 NNTQ13423 1086 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 FBXO33Q7Z6M2 555 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 DMRTB1Q96MA1 342 aa7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 NXF1Q9UBU9 619 aaKnown RBP7.65□□□□□ -1.18
HMGB3P18-201ENST00000406327 IL2RAP01589 272 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 GMPRP36959 345 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 POTEAQ6S8J7 498 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 IRF7Q92985 503 aa7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 KIAA1522Q9P206 1035 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P18-201ENST00000406327 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 USP5P45974 858 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 EIF1AXP47813 144 aaKnown RBP7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 TEAD4Q15561 434 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 NPAS3Q8IXF0 933 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 HPS1Q92902 700 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 ZNF232Q9UNY5 417 aa7.63□□□□□ -1.19
HMGB3P18-201ENST00000406327 TCF3P15923 654 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 PTGIRP43119 386 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 HIF1AQ16665 826 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 RTN1Q16799 776 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 TBCELQ5QJ74 424 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 COX20Q5RI15 118 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 Q6ZVU0 165 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 TMC7Q7Z402 723 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 SAP130Q9H0E3 1048 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 IQSEC3Q9UPP2 1182 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 HRH3Q9Y5N1 445 aa7.62□□□□□ -1.19
HMGB3P18-201ENST00000406327 PCSK2P16519 638 aa7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 SUZ12Q15022 739 aaKnown RBP7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
HMGB3P18-201ENST00000406327 MEN1O00255 615 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 EML1O00423 815 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 TNFRSF10BO14763 440 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 TREHO43280 583 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 ZIC2O95409 532 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 GPC1P35052 558 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms