RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 KIF24Q5T7B8 1368 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-206ENST00000405546 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 TECPR2O15040 1411 aa18.18■□□□□ 0.5
ATG4B-206ENST00000405546 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-206ENST00000405546 BTBD11A6QL63 1104 aa18.17■□□□□ 0.5
ATG4B-206ENST00000405546 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
ATG4B-206ENST00000405546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
ATG4B-206ENST00000405546 ZNF445P59923 1031 aa18.17■□□□□ 0.5
ATG4B-206ENST00000405546 DLG5Q8TDM6 1919 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 C1orf141Q5JVX7 400 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 RGS12O14924 1447 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-206ENST00000405546 PTMSP20962 102 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 ESYT1Q9BSJ8 1104 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
ATG4B-206ENST00000405546 ZNF500O60304 480 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-206ENST00000405546 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
ATG4B-206ENST00000405546 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
ATG4B-206ENST00000405546 TMX3Q96JJ7 454 aa18.15■□□□□ 0.5
ATG4B-206ENST00000405546 USP31Q70CQ4 1352 aa18.14■□□□□ 0.5
ATG4B-206ENST00000405546 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
ATG4B-206ENST00000405546 MAP3K5Q99683 1374 aa18.14■□□□□ 0.49
ATG4B-206ENST00000405546 DYNC1I1O14576 645 aa18.14■□□□□ 0.49
ATG4B-206ENST00000405546 USP25Q9UHP3 1055 aa18.14■□□□□ 0.49
ATG4B-206ENST00000405546 CWC27Q6UX04 472 aaKnown RBP18.13■□□□□ 0.49
ATG4B-206ENST00000405546 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
ATG4B-206ENST00000405546 CHMLP26374 656 aa18.13■□□□□ 0.49
ATG4B-206ENST00000405546 PPP4R3BQ5MIZ7 849 aa18.13■□□□□ 0.49
ATG4B-206ENST00000405546 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
ATG4B-206ENST00000405546 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
ATG4B-206ENST00000405546 ZC3H6P61129 1189 aaKnown RBP18.12■□□□□ 0.49
ATG4B-206ENST00000405546 ANKLE2Q86XL3 938 aa18.12■□□□□ 0.49
ATG4B-206ENST00000405546 PDLIM2Q96JY6 352 aa18.12■□□□□ 0.49
ATG4B-206ENST00000405546 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
ATG4B-206ENST00000405546 KCNJ4P48050 445 aa18.12■□□□□ 0.49
ATG4B-206ENST00000405546 LRSAM1Q6UWE0 723 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 SMAP1Q8IYB5 467 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-206ENST00000405546 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 SPG7Q9UQ90 795 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 ATP2B3Q16720 1220 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
ATG4B-206ENST00000405546 CEP170BQ9Y4F5 1589 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-206ENST00000405546 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
ATG4B-206ENST00000405546 PLEKHO1Q53GL0 409 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-206ENST00000405546 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-206ENST00000405546 ITSN1Q15811 1721 aa18.1■□□□□ 0.49
ATG4B-206ENST00000405546 GADD45BO75293 160 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-206ENST00000405546 CCDC94Q9BW85 323 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-206ENST00000405546 SIL1Q9H173 461 aa18.1■□□□□ 0.49
ATG4B-206ENST00000405546 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
ATG4B-206ENST00000405546 PA2G4Q9UQ80 394 aaKnown RBP18.09■□□□□ 0.49
ATG4B-206ENST00000405546 ZSCAN20P17040 1043 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-206ENST00000405546 ZNF710Q8N1W2 664 aa18.09■□□□□ 0.49
ATG4B-206ENST00000405546 IP6K1Q92551 441 aa18.09■□□□□ 0.49
ATG4B-206ENST00000405546 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.49
ATG4B-206ENST00000405546 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 MYL6BP14649 208 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 DIAPH3Q9NSV4 1193 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
ATG4B-206ENST00000405546 SPC24Q8NBT2 197 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 OSBPL3Q9H4L5 887 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
ATG4B-206ENST00000405546 IFIT2P09913 472 aaKnown RBP18.07■□□□□ 0.48
ATG4B-206ENST00000405546 SETD1AO15047 1707 aaKnown RBP18.07■□□□□ 0.48
ATG4B-206ENST00000405546 CPA1P15085 419 aa18.07■□□□□ 0.48
ATG4B-206ENST00000405546 KDRP35968 1356 aa18.07■□□□□ 0.48
ATG4B-206ENST00000405546 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
ATG4B-206ENST00000405546 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
ATG4B-206ENST00000405546 NLRP2Q9NX02 1062 aa18.07■□□□□ 0.48
ATG4B-206ENST00000405546 RIMS1Q86UR5 1692 aaKnown RBP18.07■□□□□ 0.48
ATG4B-206ENST00000405546 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-206ENST00000405546 C3P01024 1663 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 ZBTB22O15209 634 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 CNTROBQ8N137 903 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 TSPY26PQ9H489 355 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-206ENST00000405546 IL25Q9H293 177 aa18.06■□□□□ 0.48
ATG4B-206ENST00000405546 IBTKQ9P2D0 1353 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-206ENST00000405546 GCP02774 474 aa18.05■□□□□ 0.48
ATG4B-206ENST00000405546 U2AF2P26368 475 aaKnown RBP eCLIP18.05■□□□□ 0.488e-10■■□□□ 12.2
ATG4B-206ENST00000405546 KNDC1Q76NI1 1749 aa18.05■□□□□ 0.48
ATG4B-206ENST00000405546 MON2Q7Z3U7 1717 aa18.05■□□□□ 0.48
ATG4B-206ENST00000405546 TERF1P54274 439 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 PROSER3Q2NL68 480 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 ANKRD24Q8TF21 1146 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 BBXQ8WY36 941 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-206ENST00000405546 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms