RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 ANAPC15P60006 121 aa18.73■□□□□ 0.59
ATG4B-205ENST00000404914 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-205ENST00000404914 CCDC183Q5T5S1 534 aa18.73■□□□□ 0.59
ATG4B-205ENST00000404914 PRIMPOLQ96LW4 560 aa18.73■□□□□ 0.59
ATG4B-205ENST00000404914 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
ATG4B-205ENST00000404914 PTPRUQ92729 1446 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 PHF14O94880 888 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 HMGN5P82970 282 aaKnown RBP18.72■□□□□ 0.59
ATG4B-205ENST00000404914 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 SPTLC3Q9NUV7 552 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 FIBPO43427 364 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 CPA1P15085 419 aa18.72■□□□□ 0.59
ATG4B-205ENST00000404914 SPDYE4A6NLX3 237 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 GNAI2P04899 355 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 NECTIN2Q92692 538 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 NPHP4O75161 1426 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-205ENST00000404914 CRB1P82279 1406 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 FAM184AQ8NB25 1140 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 KDM4AO75164 1064 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 TMEM87AQ8NBN3 555 aa18.71■□□□□ 0.59
ATG4B-205ENST00000404914 LARGE1O95461 756 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 RASEFQ8IZ41 740 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 FUCA2Q9BTY2 467 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-205ENST00000404914 HSP90AB2PQ58FF8 381 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 SPC24Q8NBT2 197 aa18.7■□□□□ 0.58
ATG4B-205ENST00000404914 SYT1P21579 422 aa18.69■□□□□ 0.58
ATG4B-205ENST00000404914 SOX12O15370 315 aa18.69■□□□□ 0.58
ATG4B-205ENST00000404914 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-205ENST00000404914 HSPA4P34932 840 aa18.69■□□□□ 0.58
ATG4B-205ENST00000404914 NUDT16Q96DE0 195 aaKnown RBP18.69■□□□□ 0.58
ATG4B-205ENST00000404914 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
ATG4B-205ENST00000404914 RUFY3Q7L099 469 aa18.68■□□□□ 0.58
ATG4B-205ENST00000404914 RIOK3O14730 519 aaKnown RBP18.68■□□□□ 0.58
ATG4B-205ENST00000404914 CCT4P50991 539 aaKnown RBP18.68■□□□□ 0.58
ATG4B-205ENST00000404914 AK2P54819 239 aa18.68■□□□□ 0.58
ATG4B-205ENST00000404914 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
ATG4B-205ENST00000404914 TBX22Q9Y458 520 aa18.68■□□□□ 0.58
ATG4B-205ENST00000404914 KIAA1524Q8TCG1 905 aa18.67■□□□□ 0.58
ATG4B-205ENST00000404914 SNX14Q9Y5W7 946 aa18.67■□□□□ 0.58
ATG4B-205ENST00000404914 LRRFIP2Q9Y608 721 aaKnown RBP18.67■□□□□ 0.58
ATG4B-205ENST00000404914 TTC14Q96N46 770 aa18.67■□□□□ 0.58
ATG4B-205ENST00000404914 IGSF3O75054 1194 aa18.67■□□□□ 0.58
ATG4B-205ENST00000404914 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
ATG4B-205ENST00000404914 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
ATG4B-205ENST00000404914 STX6O43752 255 aa18.66■□□□□ 0.58
ATG4B-205ENST00000404914 UBE2HP62256 183 aa18.66■□□□□ 0.58
ATG4B-205ENST00000404914 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
ATG4B-205ENST00000404914 UTP14CQ5TAP6 766 aaKnown RBP18.66■□□□□ 0.58
ATG4B-205ENST00000404914 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
ATG4B-205ENST00000404914 DNM1Q05193 864 aaKnown RBP18.66■□□□□ 0.58
ATG4B-205ENST00000404914 NRKQ7Z2Y5 1582 aa18.65■□□□□ 0.58
ATG4B-205ENST00000404914 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
ATG4B-205ENST00000404914 F13A1P00488 732 aa18.65■□□□□ 0.58
ATG4B-205ENST00000404914 U2AF2P26368 475 aaKnown RBP eCLIP18.65■□□□□ 0.588e-10■■□□□ 12.2
ATG4B-205ENST00000404914 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-205ENST00000404914 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
ATG4B-205ENST00000404914 AMOTL2Q9Y2J4 779 aa18.65■□□□□ 0.58
ATG4B-205ENST00000404914 DLC1Q96QB1 1528 aa18.65■□□□□ 0.58
ATG4B-205ENST00000404914 MON2Q7Z3U7 1717 aa18.64■□□□□ 0.58
ATG4B-205ENST00000404914 DIP2AQ14689 1571 aa18.64■□□□□ 0.58
ATG4B-205ENST00000404914 PRR36Q9H6K5 1346 aa18.64■□□□□ 0.57
ATG4B-205ENST00000404914 MTHFSDQ2M296 383 aaKnown RBP18.64■□□□□ 0.57
ATG4B-205ENST00000404914 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
ATG4B-205ENST00000404914 CHD2O14647 1828 aaKnown RBP18.64■□□□□ 0.57
ATG4B-205ENST00000404914 KCNA6P17658 529 aa18.64■□□□□ 0.57
ATG4B-205ENST00000404914 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
ATG4B-205ENST00000404914 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
ATG4B-205ENST00000404914 FLIIQ13045 1269 aa18.63■□□□□ 0.57
ATG4B-205ENST00000404914 CHMP3Q9Y3E7 222 aa18.63■□□□□ 0.57
ATG4B-205ENST00000404914 RAD50Q92878 1312 aa18.62■□□□□ 0.57
ATG4B-205ENST00000404914 COL9A3Q14050 684 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-205ENST00000404914 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
ATG4B-205ENST00000404914 LSG1Q9H089 658 aaKnown RBP18.62■□□□□ 0.57
ATG4B-205ENST00000404914 MAP3K19Q56UN5 1328 aa18.62■□□□□ 0.57
ATG4B-205ENST00000404914 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
ATG4B-205ENST00000404914 CCDC83Q8IWF9 413 aa18.62■□□□□ 0.57
ATG4B-205ENST00000404914 PODXL2Q9NZ53 605 aa18.62■□□□□ 0.57
ATG4B-205ENST00000404914 XRN1Q8IZH2 1706 aaKnown RBP18.62■□□□□ 0.57
ATG4B-205ENST00000404914 SGSM2O43147 1006 aa18.61■□□□□ 0.57
ATG4B-205ENST00000404914 PTGS1P23219 599 aa18.61■□□□□ 0.57
ATG4B-205ENST00000404914 ST3GAL1Q11201 340 aa18.61■□□□□ 0.57
ATG4B-205ENST00000404914 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
ATG4B-205ENST00000404914 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-205ENST00000404914 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
ATG4B-205ENST00000404914 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
ATG4B-205ENST00000404914 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 USP44Q9H0E7 712 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 SMC3Q9UQE7 1217 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 MTMR6Q9Y217 621 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 TECPR2O15040 1411 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 GJB2P29033 226 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 LRMPQ12912 555 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 ADCK5Q3MIX3 580 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 ANKRD7Q92527 254 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 LIMCH1Q9UPQ0 1083 aa18.6■□□□□ 0.57
ATG4B-205ENST00000404914 LETM1O95202 739 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms