RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
HMGA2-204ENST00000403681 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
HMGA2-204ENST00000403681 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 NEXNQ0ZGT2 675 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 PDILTQ8N807 584 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 KDM5AP29375 1690 aaKnown RBP16.45■□□□□ 0.22
HMGA2-204ENST00000403681 TMCO3Q6UWJ1 677 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 AACSQ86V21 672 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 CREBRFQ8IUR6 639 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 FAM177A1Q8N128 213 aaPredicted RBP16.45■□□□□ 0.22
HMGA2-204ENST00000403681 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 ABCC4O15439 1325 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 TIGD1Q96MW7 591 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
HMGA2-204ENST00000403681 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
HMGA2-204ENST00000403681 STK38Q15208 465 aa16.44■□□□□ 0.22
HMGA2-204ENST00000403681 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
HMGA2-204ENST00000403681 SFPQP23246 707 aaKnown RBP eCLIP16.44■□□□□ 0.224e-8■■□□□ 11.9
HMGA2-204ENST00000403681 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
HMGA2-204ENST00000403681 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
HMGA2-204ENST00000403681 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
HMGA2-204ENST00000403681 SKILP12757 684 aa16.43■□□□□ 0.22
HMGA2-204ENST00000403681 HSP90B2PQ58FF3 399 aa16.43■□□□□ 0.22
HMGA2-204ENST00000403681 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
HMGA2-204ENST00000403681 DHX8Q14562 1220 aaKnown RBP16.43■□□□□ 0.22
HMGA2-204ENST00000403681 UTP14CQ5TAP6 766 aaKnown RBP16.43■□□□□ 0.22
HMGA2-204ENST00000403681 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
HMGA2-204ENST00000403681 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
HMGA2-204ENST00000403681 CCDC171Q6TFL3 1326 aa16.43■□□□□ 0.22
HMGA2-204ENST00000403681 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
HMGA2-204ENST00000403681 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
HMGA2-204ENST00000403681 BMS1Q14692 1282 aaKnown RBP16.42■□□□□ 0.22
HMGA2-204ENST00000403681 AK7Q96M32 723 aa16.42■□□□□ 0.22
HMGA2-204ENST00000403681 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
HMGA2-204ENST00000403681 SERPINC1P01008 464 aa16.42■□□□□ 0.22
HMGA2-204ENST00000403681 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
HMGA2-204ENST00000403681 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
HMGA2-204ENST00000403681 DDIT3P35638 169 aa16.42■□□□□ 0.22
HMGA2-204ENST00000403681 MSH6P52701 1360 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 CAVIN2O95810 425 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 GTF2F1P35269 517 aaKnown RBP eCLIP16.41■□□□□ 0.221e-9■■■■■ 30.5
HMGA2-204ENST00000403681 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
HMGA2-204ENST00000403681 PALD1Q9ULE6 856 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 SIL1Q9H173 461 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
HMGA2-204ENST00000403681 ZNF397Q8NF99 534 aaPredicted RBP16.4■□□□□ 0.22
HMGA2-204ENST00000403681 DNAJC2Q99543 621 aaKnown RBP16.4■□□□□ 0.22
HMGA2-204ENST00000403681 URI1O94763 535 aaPredicted RBP16.4■□□□□ 0.22
HMGA2-204ENST00000403681 CPA1P15085 419 aa16.4■□□□□ 0.22
HMGA2-204ENST00000403681 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
HMGA2-204ENST00000403681 CTAGE5O15320 804 aa16.4■□□□□ 0.22
HMGA2-204ENST00000403681 TPM1P09493 284 aa16.4■□□□□ 0.22
HMGA2-204ENST00000403681 NLRP6P59044 892 aa16.4■□□□□ 0.22
HMGA2-204ENST00000403681 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
HMGA2-204ENST00000403681 LEKR1Q6ZMV7 388 aa16.4■□□□□ 0.22
HMGA2-204ENST00000403681 DTNBO60941 627 aa16.39■□□□□ 0.21
HMGA2-204ENST00000403681 KRT32Q14532 448 aa16.39■□□□□ 0.21
HMGA2-204ENST00000403681 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.21
HMGA2-204ENST00000403681 TCEANC2Q96MN5 208 aa16.39■□□□□ 0.21
HMGA2-204ENST00000403681 GSDMDP57764 484 aa16.39■□□□□ 0.21
HMGA2-204ENST00000403681 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-204ENST00000403681 STX1AQ16623 288 aa16.39■□□□□ 0.21
HMGA2-204ENST00000403681 RIC3Q7Z5B4 369 aa16.38■□□□□ 0.21
HMGA2-204ENST00000403681 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
HMGA2-204ENST00000403681 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
HMGA2-204ENST00000403681 ABCA8O94911 1581 aa16.38■□□□□ 0.21
HMGA2-204ENST00000403681 SLU7O95391 586 aaKnown RBP16.38■□□□□ 0.21
HMGA2-204ENST00000403681 GABPB1Q06547 395 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-204ENST00000403681 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-204ENST00000403681 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
HMGA2-204ENST00000403681 NPHP3Q7Z494 1330 aa16.38■□□□□ 0.21
HMGA2-204ENST00000403681 NLRP1Q9C000 1473 aa16.38■□□□□ 0.21
HMGA2-204ENST00000403681 TRIM29Q14134 588 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 NEUROD6Q96NK8 337 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 PYCARDQ9ULZ3 195 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 TSPYL1Q9H0U9 437 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 ZDHHC9Q9Y397 364 aa16.37■□□□□ 0.21
HMGA2-204ENST00000403681 ATP10AO60312 1499 aa16.36■□□□□ 0.21
HMGA2-204ENST00000403681 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
HMGA2-204ENST00000403681 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
HMGA2-204ENST00000403681 G2E3Q7L622 706 aa16.36■□□□□ 0.21
HMGA2-204ENST00000403681 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
HMGA2-204ENST00000403681 CUL4AQ13619 759 aa16.36■□□□□ 0.21
HMGA2-204ENST00000403681 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
HMGA2-204ENST00000403681 PES1O00541 588 aaKnown RBP16.35■□□□□ 0.21
HMGA2-204ENST00000403681 TMC6Q7Z403 805 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 SNX14Q9Y5W7 946 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 FANCAO15360 1455 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 ERCC6L2Q5T890 1561 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 WASLO00401 505 aaPredicted RBP16.35■□□□□ 0.21
HMGA2-204ENST00000403681 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms