RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 USP42Q9H9J4 1324 aaKnown RBP22.3■■□□□ 1.16
CSNK1D-205ENST00000403276 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-205ENST00000403276 FMNL2Q96PY5 1086 aa22.29■■□□□ 1.16
CSNK1D-205ENST00000403276 WWC3Q9ULE0 1092 aa22.29■■□□□ 1.16
CSNK1D-205ENST00000403276 STARD3NLO95772 234 aa22.28■■□□□ 1.16
CSNK1D-205ENST00000403276 KIF13BQ9NQT8 1826 aa22.27■■□□□ 1.16
CSNK1D-205ENST00000403276 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
CSNK1D-205ENST00000403276 MIS18AQ9NYP9 233 aa22.27■■□□□ 1.16
CSNK1D-205ENST00000403276 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
CSNK1D-205ENST00000403276 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-205ENST00000403276 COL15A1P39059 1388 aa22.26■■□□□ 1.15
CSNK1D-205ENST00000403276 ZPR1O75312 459 aa22.26■■□□□ 1.15
CSNK1D-205ENST00000403276 NFE2L2Q16236 605 aa22.26■■□□□ 1.15
CSNK1D-205ENST00000403276 PRAMEF22A3QJZ6 481 aa22.25■■□□□ 1.15
CSNK1D-205ENST00000403276 A1BGP04217 495 aa22.25■■□□□ 1.15
CSNK1D-205ENST00000403276 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
CSNK1D-205ENST00000403276 TEX13AQ9BXU3 409 aaPredicted RBP22.25■■□□□ 1.15
CSNK1D-205ENST00000403276 PNNQ9H307 717 aaKnown RBP22.25■■□□□ 1.15
CSNK1D-205ENST00000403276 MAPK8IP3Q9UPT6 1336 aa22.25■■□□□ 1.15
CSNK1D-205ENST00000403276 TAF7Q15545 349 aaPredicted RBP22.24■■□□□ 1.15
CSNK1D-205ENST00000403276 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
CSNK1D-205ENST00000403276 NARFQ9UHQ1 456 aa22.24■■□□□ 1.15
CSNK1D-205ENST00000403276 USP16Q9Y5T5 823 aa22.24■■□□□ 1.15
CSNK1D-205ENST00000403276 EIF5P55010 431 aaKnown RBP22.23■■□□□ 1.15
CSNK1D-205ENST00000403276 DDR1Q08345 913 aa22.23■■□□□ 1.15
CSNK1D-205ENST00000403276 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
CSNK1D-205ENST00000403276 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
CSNK1D-205ENST00000403276 TM4SF1P30408 202 aa22.22■■□□□ 1.15
CSNK1D-205ENST00000403276 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
CSNK1D-205ENST00000403276 PIP4K2AP48426 406 aaPredicted RBP22.21■■□□□ 1.15
CSNK1D-205ENST00000403276 AFDNP55196 1824 aaKnown RBP22.21■■□□□ 1.15
CSNK1D-205ENST00000403276 A0A0G2JLW4 131 aa22.2■■□□□ 1.14
CSNK1D-205ENST00000403276 GRIN3BO60391 1043 aa22.2■■□□□ 1.14
CSNK1D-205ENST00000403276 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
CSNK1D-205ENST00000403276 C10orf71Q711Q0 1435 aa22.2■■□□□ 1.14
CSNK1D-205ENST00000403276 KDM3BQ7LBC6 1761 aa22.2■■□□□ 1.14
CSNK1D-205ENST00000403276 POLRMTO00411 1230 aaKnown RBP22.19■■□□□ 1.14
CSNK1D-205ENST00000403276 SNRPA1P09661 255 aaKnown RBP22.19■■□□□ 1.14
CSNK1D-205ENST00000403276 RIPK4P57078 832 aa22.19■■□□□ 1.14
CSNK1D-205ENST00000403276 TBC1D2BQ9UPU7 963 aa22.19■■□□□ 1.14
CSNK1D-205ENST00000403276 PXDNLA1KZ92 1463 aa22.19■■□□□ 1.14
CSNK1D-205ENST00000403276 NFIXQ14938 502 aa22.18■■□□□ 1.14
CSNK1D-205ENST00000403276 A0A087WZG4 1122 aa22.17■■□□□ 1.14
CSNK1D-205ENST00000403276 DPEP1P16444 411 aa22.17■■□□□ 1.14
CSNK1D-205ENST00000403276 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
CSNK1D-205ENST00000403276 TGFB2P61812 414 aa22.17■■□□□ 1.14
CSNK1D-205ENST00000403276 WDR43Q15061 677 aaKnown RBP eCLIP22.17■■□□□ 1.14
CSNK1D-205ENST00000403276 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
CSNK1D-205ENST00000403276 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
CSNK1D-205ENST00000403276 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
CSNK1D-205ENST00000403276 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
CSNK1D-205ENST00000403276 NEUROD2Q15784 382 aa22.15■■□□□ 1.14
CSNK1D-205ENST00000403276 BICDL1Q6ZP65 573 aa22.15■■□□□ 1.14
CSNK1D-205ENST00000403276 ZNF784Q8NCA9 323 aaPredicted RBP22.15■■□□□ 1.14
CSNK1D-205ENST00000403276 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
CSNK1D-205ENST00000403276 BRCA1P38398 1863 aaKnown RBP22.15■■□□□ 1.14
CSNK1D-205ENST00000403276 SCN7AQ01118 1682 aa22.14■■□□□ 1.13
CSNK1D-205ENST00000403276 TBC1D9BQ66K14 1250 aa22.13■■□□□ 1.13
CSNK1D-205ENST00000403276 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
CSNK1D-205ENST00000403276 NRXN2Q9P2S2 1712 aa22.13■■□□□ 1.13
CSNK1D-205ENST00000403276 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 NBPF26B4DH59 902 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 SERPINB2P05120 415 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 KCNA3P22001 575 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 EIF4A1P60842 406 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 NBPF10Q6P3W6 841 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 NBPF15Q8N660 670 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 RUNDC1Q96C34 613 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 BCS1LQ9Y276 419 aa22.12■■□□□ 1.13
CSNK1D-205ENST00000403276 CAMTA2O94983 1202 aa22.11■■□□□ 1.13
CSNK1D-205ENST00000403276 CHRNA5P30532 468 aa22.11■■□□□ 1.13
CSNK1D-205ENST00000403276 DZIP3Q86Y13 1208 aaKnown RBP22.11■■□□□ 1.13
CSNK1D-205ENST00000403276 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
CSNK1D-205ENST00000403276 GIGYF1O75420 1035 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-205ENST00000403276 TSPYL4Q9UJ04 414 aa22.09■■□□□ 1.13
CSNK1D-205ENST00000403276 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
CSNK1D-205ENST00000403276 CCDC184Q52MB2 194 aa22.07■■□□□ 1.12
CSNK1D-205ENST00000403276 PIM2Q9P1W9 311 aa22.07■■□□□ 1.12
CSNK1D-205ENST00000403276 TRIM35Q9UPQ4 493 aa22.07■■□□□ 1.12
CSNK1D-205ENST00000403276 ARFGEF1Q9Y6D6 1849 aa22.06■■□□□ 1.12
CSNK1D-205ENST00000403276 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
CSNK1D-205ENST00000403276 NGEFQ8N5V2 710 aa22.06■■□□□ 1.12
CSNK1D-205ENST00000403276 CARMIL3Q8ND23 1372 aa22.06■■□□□ 1.12
CSNK1D-205ENST00000403276 ANKRD31Q8N7Z5 1873 aa22.05■■□□□ 1.12
CSNK1D-205ENST00000403276 SETDB2Q96T68 719 aa22.04■■□□□ 1.12
CSNK1D-205ENST00000403276 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-205ENST00000403276 ARHGAP27Q6ZUM4 889 aa22.03■■□□□ 1.12
CSNK1D-205ENST00000403276 MYL6BP14649 208 aa22.02■■□□□ 1.12
CSNK1D-205ENST00000403276 DALRD3Q5D0E6 543 aaKnown RBP22.02■■□□□ 1.12
CSNK1D-205ENST00000403276 PRR5LQ6MZQ0 368 aa22.02■■□□□ 1.12
CSNK1D-205ENST00000403276 DLEC1Q9Y238 1755 aa22.02■■□□□ 1.11
CSNK1D-205ENST00000403276 NUP98P52948 1817 aa22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 APAF1O14727 1248 aa22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 EIF2S2P20042 333 aaKnown RBP22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 HLFQ16534 295 aa22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 CLEC4GQ6UXB4 293 aa22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 C2CD5Q86YS7 1000 aa22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
CSNK1D-205ENST00000403276 CHL1O00533 1208 aa21.99■■□□□ 1.11
CSNK1D-205ENST00000403276 KRT24Q2M2I5 525 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms