RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 APBB1O00213 710 aa13.22□□□□□ -0.29
LINC00649-202ENST00000400353 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
LINC00649-202ENST00000400353 STAP2Q9UGK3 403 aa13.22□□□□□ -0.29
LINC00649-202ENST00000400353 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
LINC00649-202ENST00000400353 K7ELQ4 463 aaPredicted RBP13.21□□□□□ -0.29
LINC00649-202ENST00000400353 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
LINC00649-202ENST00000400353 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
LINC00649-202ENST00000400353 HSP90AB4PQ58FF6 505 aa13.21□□□□□ -0.29
LINC00649-202ENST00000400353 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
LINC00649-202ENST00000400353 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
LINC00649-202ENST00000400353 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
LINC00649-202ENST00000400353 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
LINC00649-202ENST00000400353 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 ERC2O15083 957 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 POLA2Q14181 598 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
LINC00649-202ENST00000400353 XIRP1Q702N8 1843 aaKnown RBP13.2□□□□□ -0.3
LINC00649-202ENST00000400353 KCNQ3O43525 872 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
LINC00649-202ENST00000400353 MX1P20591 662 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 DDIT3P35638 169 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 COL18A1P39060 1754 aa13.2□□□□□ -0.3
LINC00649-202ENST00000400353 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
LINC00649-202ENST00000400353 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
LINC00649-202ENST00000400353 PTMSP20962 102 aa13.19□□□□□ -0.3
LINC00649-202ENST00000400353 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
LINC00649-202ENST00000400353 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
LINC00649-202ENST00000400353 ADCY9O60503 1353 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 LTBP4Q8N2S1 1624 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 PI4KAP2A4QPH2 592 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 MCM4P33991 863 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 PI4KAP1Q8N8J0 262 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 SPRYD3Q8NCJ5 442 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 CPDO75976 1380 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 CRYBG1Q9Y4K1 1723 aa13.18□□□□□ -0.3
LINC00649-202ENST00000400353 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 TUBGCP6Q96RT7 1819 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
LINC00649-202ENST00000400353 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
LINC00649-202ENST00000400353 MTX1Q13505 466 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 PPP1R42Q7Z4L9 355 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 DDX21Q9NR30 783 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00649-202ENST00000400353 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
LINC00649-202ENST00000400353 PHKG2P15735 406 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 MRC1P22897 1456 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 ST18O60284 1047 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 MCCP23508 829 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 BRINP3Q76B58 766 aa13.16□□□□□ -0.3
LINC00649-202ENST00000400353 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
LINC00649-202ENST00000400353 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
LINC00649-202ENST00000400353 SURF6O75683 361 aaKnown RBP13.15□□□□□ -0.3
LINC00649-202ENST00000400353 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
LINC00649-202ENST00000400353 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
LINC00649-202ENST00000400353 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
LINC00649-202ENST00000400353 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.31
LINC00649-202ENST00000400353 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-202ENST00000400353 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 ZNF790Q6PG37 636 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-202ENST00000400353 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 DCAF5Q96JK2 942 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-202ENST00000400353 MEGF6O75095 1541 aa13.14□□□□□ -0.31
LINC00649-202ENST00000400353 UTYO14607 1347 aa13.13□□□□□ -0.31
LINC00649-202ENST00000400353 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
LINC00649-202ENST00000400353 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
LINC00649-202ENST00000400353 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
LINC00649-202ENST00000400353 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 CHMLP26374 656 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 ANAPC15P60006 121 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
LINC00649-202ENST00000400353 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 ANXA1P04083 346 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 MCM2P49736 904 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
LINC00649-202ENST00000400353 IL17RAQ96F46 866 aa13.12□□□□□ -0.31
LINC00649-202ENST00000400353 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
LINC00649-202ENST00000400353 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
LINC00649-202ENST00000400353 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
LINC00649-202ENST00000400353 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
LINC00649-202ENST00000400353 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
LINC00649-202ENST00000400353 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
LINC00649-202ENST00000400353 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
LINC00649-202ENST00000400353 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
LINC00649-202ENST00000400353 NUCB2P80303 420 aa13.1□□□□□ -0.31
LINC00649-202ENST00000400353 OS9Q13438 667 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-202ENST00000400353 PDIA6Q15084 440 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms