RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
SMIM11A-203ENST00000399299 C10orf71Q711Q0 1435 aa19.75■□□□□ 0.75
SMIM11A-203ENST00000399299 KIAA1551Q9HCM1 1747 aa19.74■□□□□ 0.75
SMIM11A-203ENST00000399299 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
SMIM11A-203ENST00000399299 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
SMIM11A-203ENST00000399299 GRIN3BO60391 1043 aa19.72■□□□□ 0.75
SMIM11A-203ENST00000399299 YBX3P16989 372 aaKnown RBP eCLIP19.72■□□□□ 0.75
SMIM11A-203ENST00000399299 PARP3Q9Y6F1 533 aa19.72■□□□□ 0.75
SMIM11A-203ENST00000399299 ZPR1O75312 459 aa19.71■□□□□ 0.75
SMIM11A-203ENST00000399299 DCTN1Q14203 1278 aa19.71■□□□□ 0.75
SMIM11A-203ENST00000399299 FKBP8Q14318 412 aa19.71■□□□□ 0.75
SMIM11A-203ENST00000399299 NFE2L2Q16236 605 aa19.71■□□□□ 0.75
SMIM11A-203ENST00000399299 NARFQ9UHQ1 456 aa19.71■□□□□ 0.75
SMIM11A-203ENST00000399299 MAPK8IP3Q9UPT6 1336 aa19.71■□□□□ 0.75
SMIM11A-203ENST00000399299 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
SMIM11A-203ENST00000399299 KCNQ3O43525 872 aa19.7■□□□□ 0.74
SMIM11A-203ENST00000399299 EIF5P55010 431 aaKnown RBP19.7■□□□□ 0.74
SMIM11A-203ENST00000399299 PXDNLA1KZ92 1463 aa19.7■□□□□ 0.74
SMIM11A-203ENST00000399299 SCN7AQ01118 1682 aa19.7■□□□□ 0.74
SMIM11A-203ENST00000399299 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
SMIM11A-203ENST00000399299 TGFB2P61812 414 aa19.69■□□□□ 0.74
SMIM11A-203ENST00000399299 TAF7Q15545 349 aaPredicted RBP19.69■□□□□ 0.74
SMIM11A-203ENST00000399299 USPL1Q5W0Q7 1092 aa19.69■□□□□ 0.74
SMIM11A-203ENST00000399299 N4BP2Q86UW6 1770 aaPredicted RBP19.69■□□□□ 0.74
SMIM11A-203ENST00000399299 A0A087WZG4 1122 aa19.68■□□□□ 0.74
SMIM11A-203ENST00000399299 NRXN2Q9P2S2 1712 aa19.68■□□□□ 0.74
SMIM11A-203ENST00000399299 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 TM4SF1P30408 202 aa19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 IL6STP40189 918 aaPredicted RBP19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 DDR1Q08345 913 aa19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 PRKRIP1Q9H875 184 aaPredicted RBP19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 LAMB4A4D0S4 1761 aa19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
SMIM11A-203ENST00000399299 SNRPA1P09661 255 aaKnown RBP19.66■□□□□ 0.74
SMIM11A-203ENST00000399299 POLRMTO00411 1230 aaKnown RBP19.65■□□□□ 0.74
SMIM11A-203ENST00000399299 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
SMIM11A-203ENST00000399299 BCL2L12Q9HB09 334 aa19.65■□□□□ 0.74
SMIM11A-203ENST00000399299 BCORQ6W2J9 1755 aa19.65■□□□□ 0.74
SMIM11A-203ENST00000399299 A1BGP04217 495 aa19.63■□□□□ 0.73
SMIM11A-203ENST00000399299 NFIXQ14938 502 aa19.63■□□□□ 0.73
SMIM11A-203ENST00000399299 USP16Q9Y5T5 823 aa19.63■□□□□ 0.73
SMIM11A-203ENST00000399299 ZNF784Q8NCA9 323 aaPredicted RBP19.62■□□□□ 0.73
SMIM11A-203ENST00000399299 ARFGEF1Q9Y6D6 1849 aa19.61■□□□□ 0.73
SMIM11A-203ENST00000399299 PRAMEF22A3QJZ6 481 aa19.61■□□□□ 0.73
SMIM11A-203ENST00000399299 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMIM11A-203ENST00000399299 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
SMIM11A-203ENST00000399299 A0A0G2JLW4 131 aa19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 DPEP1P16444 411 aa19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 RIPK4P57078 832 aa19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 LMOD3Q0VAK6 560 aa19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
SMIM11A-203ENST00000399299 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
SMIM11A-203ENST00000399299 DLEC1Q9Y238 1755 aa19.58■□□□□ 0.73
SMIM11A-203ENST00000399299 CAMTA2O94983 1202 aa19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 SERPINB2P05120 415 aa19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 KCNA3P22001 575 aa19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 EIF4A1P60842 406 aaKnown RBP19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 RUNDC1Q96C34 613 aa19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 TBC1D2BQ9UPU7 963 aa19.58■□□□□ 0.72
SMIM11A-203ENST00000399299 GIGYF1O75420 1035 aaPredicted RBP19.57■□□□□ 0.72
SMIM11A-203ENST00000399299 DZIP3Q86Y13 1208 aaKnown RBP19.57■□□□□ 0.72
SMIM11A-203ENST00000399299 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
SMIM11A-203ENST00000399299 CARMIL3Q8ND23 1372 aa19.57■□□□□ 0.72
SMIM11A-203ENST00000399299 RGL2O15211 777 aa19.56■□□□□ 0.72
SMIM11A-203ENST00000399299 TBC1D9BQ66K14 1250 aa19.56■□□□□ 0.72
SMIM11A-203ENST00000399299 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
SMIM11A-203ENST00000399299 BCS1LQ9Y276 419 aa19.56■□□□□ 0.72
SMIM11A-203ENST00000399299 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
SMIM11A-203ENST00000399299 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
SMIM11A-203ENST00000399299 CCDC146Q8IYE0 955 aa19.55■□□□□ 0.72
SMIM11A-203ENST00000399299 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
SMIM11A-203ENST00000399299 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
SMIM11A-203ENST00000399299 ADCY9O60503 1353 aa19.55■□□□□ 0.72
SMIM11A-203ENST00000399299 PIP4K2AP48426 406 aaPredicted RBP19.54■□□□□ 0.72
SMIM11A-203ENST00000399299 CLEC4GQ6UXB4 293 aa19.54■□□□□ 0.72
SMIM11A-203ENST00000399299 TSPYL4Q9UJ04 414 aa19.54■□□□□ 0.72
SMIM11A-203ENST00000399299 ANKRD31Q8N7Z5 1873 aa19.54■□□□□ 0.72
SMIM11A-203ENST00000399299 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
SMIM11A-203ENST00000399299 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
SMIM11A-203ENST00000399299 CHRNA5P30532 468 aa19.52■□□□□ 0.72
SMIM11A-203ENST00000399299 SETDB2Q96T68 719 aa19.52■□□□□ 0.72
SMIM11A-203ENST00000399299 ZNF652Q9Y2D9 606 aa19.52■□□□□ 0.72
SMIM11A-203ENST00000399299 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
SMIM11A-203ENST00000399299 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
SMIM11A-203ENST00000399299 DALRD3Q5D0E6 543 aaKnown RBP19.51■□□□□ 0.71
SMIM11A-203ENST00000399299 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
SMIM11A-203ENST00000399299 PRR5LQ6MZQ0 368 aa19.5■□□□□ 0.71
SMIM11A-203ENST00000399299 TRIM35Q9UPQ4 493 aa19.5■□□□□ 0.71
SMIM11A-203ENST00000399299 PDZRN3Q9UPQ7 1066 aa19.5■□□□□ 0.71
SMIM11A-203ENST00000399299 ATP10DQ9P241 1426 aa19.5■□□□□ 0.71
SMIM11A-203ENST00000399299 BRIP1Q9BX63 1249 aa19.49■□□□□ 0.71
SMIM11A-203ENST00000399299 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
SMIM11A-203ENST00000399299 CNBD1Q8NA66 436 aa19.48■□□□□ 0.71
SMIM11A-203ENST00000399299 NUP98P52948 1817 aa19.48■□□□□ 0.71
SMIM11A-203ENST00000399299 H0YIN7 160 aa19.47■□□□□ 0.71
SMIM11A-203ENST00000399299 CHL1O00533 1208 aa19.47■□□□□ 0.71
SMIM11A-203ENST00000399299 PDE6BP35913 854 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms