RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
GAREM1-202ENST00000399218 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
GAREM1-202ENST00000399218 CEP152O94986 1710 aa13.04□□□□□ -0.32
GAREM1-202ENST00000399218 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
GAREM1-202ENST00000399218 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
GAREM1-202ENST00000399218 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
GAREM1-202ENST00000399218 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
GAREM1-202ENST00000399218 PDE4CQ08493 712 aa13.04□□□□□ -0.32
GAREM1-202ENST00000399218 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
GAREM1-202ENST00000399218 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
GAREM1-202ENST00000399218 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
GAREM1-202ENST00000399218 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
GAREM1-202ENST00000399218 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
GAREM1-202ENST00000399218 HSPA1LP34931 641 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 CDC45O75419 566 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
GAREM1-202ENST00000399218 SKAP1Q86WV1 359 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 NSFL1CQ9UNZ2 370 aaKnown RBP13.03□□□□□ -0.32
GAREM1-202ENST00000399218 CT47B1P0C2W7 299 aaPredicted RBP13.03□□□□□ -0.32
GAREM1-202ENST00000399218 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 GJA3Q9Y6H8 435 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 CDCA7Q9BWT1 371 aaPredicted RBP13.03□□□□□ -0.32
GAREM1-202ENST00000399218 TPTE2Q6XPS3 522 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 NACAP1Q9BZK3 213 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
GAREM1-202ENST00000399218 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
GAREM1-202ENST00000399218 GCC1Q96CN9 775 aa13.02□□□□□ -0.32
GAREM1-202ENST00000399218 CHMP4BP1P59074 171 aa13.02□□□□□ -0.32
GAREM1-202ENST00000399218 WDR78Q5VTH9 848 aa13.02□□□□□ -0.32
GAREM1-202ENST00000399218 KDM5CP41229 1560 aa13.02□□□□□ -0.32
GAREM1-202ENST00000399218 SBNO1A3KN83 1393 aa13.02□□□□□ -0.32
GAREM1-202ENST00000399218 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
GAREM1-202ENST00000399218 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.33
GAREM1-202ENST00000399218 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.33
GAREM1-202ENST00000399218 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
GAREM1-202ENST00000399218 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
GAREM1-202ENST00000399218 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
GAREM1-202ENST00000399218 TRIM27P14373 513 aa13.02□□□□□ -0.33
GAREM1-202ENST00000399218 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
GAREM1-202ENST00000399218 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
GAREM1-202ENST00000399218 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
GAREM1-202ENST00000399218 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
GAREM1-202ENST00000399218 IL13P35225 146 aa13.01□□□□□ -0.33
GAREM1-202ENST00000399218 AFF2P51816 1311 aa13.01□□□□□ -0.33
GAREM1-202ENST00000399218 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
GAREM1-202ENST00000399218 KRT27Q7Z3Y8 459 aa13.01□□□□□ -0.33
GAREM1-202ENST00000399218 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
GAREM1-202ENST00000399218 RIMS1Q86UR5 1692 aaKnown RBP13.01□□□□□ -0.33
GAREM1-202ENST00000399218 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
GAREM1-202ENST00000399218 MAP3K4Q9Y6R4 1608 aa13□□□□□ -0.33
GAREM1-202ENST00000399218 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
GAREM1-202ENST00000399218 FAM89AQ96GI7 184 aa13□□□□□ -0.33
GAREM1-202ENST00000399218 PIK3R4Q99570 1358 aa13□□□□□ -0.33
GAREM1-202ENST00000399218 ALDH1L2Q3SY69 923 aa13□□□□□ -0.33
GAREM1-202ENST00000399218 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
GAREM1-202ENST00000399218 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
GAREM1-202ENST00000399218 GPR162Q16538 588 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 CNBD1Q8NA66 436 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
GAREM1-202ENST00000399218 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
GAREM1-202ENST00000399218 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
GAREM1-202ENST00000399218 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
GAREM1-202ENST00000399218 SMC3Q9UQE7 1217 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
GAREM1-202ENST00000399218 MKNK2Q9HBH9 465 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 KCNQ3O43525 872 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 GOLIM4O00461 696 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 UNC5CLQ8IV45 518 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 MEIS3Q99687 375 aa12.98□□□□□ -0.33
GAREM1-202ENST00000399218 HIP1O00291 1037 aa12.97□□□□□ -0.33
GAREM1-202ENST00000399218 VEZTQ9HBM0 779 aa12.97□□□□□ -0.33
GAREM1-202ENST00000399218 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
GAREM1-202ENST00000399218 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
GAREM1-202ENST00000399218 PICALMQ13492 652 aa12.97□□□□□ -0.33
GAREM1-202ENST00000399218 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
GAREM1-202ENST00000399218 PTPRCP08575 1304 aa12.97□□□□□ -0.33
GAREM1-202ENST00000399218 BCS1LQ9Y276 419 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 ZNF408Q9H9D4 720 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 PIK3C2GO75747 1445 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 NEK4P51957 841 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.33
GAREM1-202ENST00000399218 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 KSR2Q6VAB6 950 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 ASAP1Q9ULH1 1129 aa12.96□□□□□ -0.33
GAREM1-202ENST00000399218 PSMA5P28066 241 aa12.96□□□□□ -0.34
GAREM1-202ENST00000399218 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.34
GAREM1-202ENST00000399218 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 917.6 ms